mRNA_H-elongata_contig15512.3612.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A6H5KCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI8_9PHAE) HSP 1 Score: 144 bits (362), Expect = 6.300e-38 Identity = 63/91 (69.23%), Postives = 79/91 (86.81%), Query Frame = 3
Query: 9 CDVVHTFRSQHPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHSQRIGGFASGSADSRVALWNMFPD---GGG 272
C+VV +FR +HPGT+CVEIRRDQKLFVSGGWDHRVRAFSW++PRPLA+LRSH+ +V ++A+S RIGG SGS DSRVA+W ++P+ GGG
Sbjct: 335 CEVVKSFRLEHPGTSCVEIRRDQKLFVSGGWDHRVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERNRGGG 425
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A9NVL8_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NVL8_PICSI) HSP 1 Score: 82.8 bits (203), Expect = 2.120e-15 Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 3
Query: 39 HPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHSQRIGGFASGSADSRVALWNMFPDG 266
HPG + + IR D K+F + GWDHRVR + + +PLAIL+ H +VTS++ S+ AS S D+ +ALW+++P G
Sbjct: 368 HPGISDISIRIDSKIFATAGWDHRVRVYDYHKRKPLAILKYHSATVTSVSFSKDCKLIASSSEDATIALWSLYPPG 443
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A1B0D102_PHLPP (Uncharacterized protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D102_PHLPP) HSP 1 Score: 79.3 bits (194), Expect = 1.760e-14 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 3
Query: 36 QHPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHSQ------RIGGFASGSADSRVALWNMF 257
++PG +C+ IR D+K+FVSGGWD R+R FSW+S RPLA+L H S++ +A S R A D ++ LWN++
Sbjct: 235 KNPGVSCLRIRPDRKIFVSGGWDGRIRVFSWKSLRPLAVLTEHKKSISDVAFSPGRVELWRAPLMAIAGEDRQITLWNLY 314
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: B4H5A7_DROPE (GL10086 n=8 Tax=obscura group TaxID=32355 RepID=B4H5A7_DROPE) HSP 1 Score: 79.0 bits (193), Expect = 2.610e-14 Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 3
Query: 36 QHPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSH-DGSVTSIAHSQ------RIGGFASGSADSRVALWNMF 257
++PG CV IR DQK+F SGGWD R+R FSW+S RPLA+L H G V +A+SQ R A+ D +++LW+++
Sbjct: 242 KNPGVNCVRIRADQKVFASGGWDGRIRIFSWKSLRPLAVLTQHKQGGVMDLAYSQQPVAMWRAPIMAAAGMDGQISLWDLY 322
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A4W6EMS2_LATCA (G protein subunit beta 1 like n=3 Tax=Carangaria TaxID=1489904 RepID=A0A4W6EMS2_LATCA) HSP 1 Score: 78.6 bits (192), Expect = 3.770e-14 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 3
Query: 39 HPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHS------QRIGGFASGSADSRVALWNMFPDG 266
+PG + + IR D KL S GWDHRVR FSW+ RPLA+L+ H V S+A S QR+ A+GS D R++LW+++ +G
Sbjct: 245 NPGVSQLCIREDGKLLASAGWDHRVRVFSWKKLRPLAVLQYHTDMVLSVAFSDHQDPKQRL--LAAGSKDQRISLWSIYNEG 324
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A1A8MUT0_9TELE (Guanine nucleotide binding protein (G protein), beta polypeptide 1-like (Fragment) n=3 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8MUT0_9TELE) HSP 1 Score: 76.6 bits (187), Expect = 9.340e-14 Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 3
Query: 39 HPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHS------QRIGGFASGSADSRVALWNMFPDGGG 272
+PG + + IR D ++ S GWD RVR FSW+ RPLA+L+ H V S+A S QR+ A+GS D R++LW+++ DG G
Sbjct: 178 NPGVSQLCIREDGRILASAGWDDRVRIFSWKKLRPLAVLQYHTDMVLSVAFSDHQDPRQRL--LAAGSKDQRISLWSIYNDGAG 259
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A6F9DXG7_9ASCI (WD repeat-containing protein 38 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DXG7_9ASCI) HSP 1 Score: 74.7 bits (182), Expect = 1.080e-13 Identity = 31/82 (37.80%), Postives = 57/82 (69.51%), Query Frame = 3
Query: 24 TFRSQHPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHS-QRIGG---FASGSADSRVALWNMF 257
++ +PG A V++R D K+F +GGWD+++R FSW+S +PLA+L H G++ ++A S I G A G+ D+++++W+++
Sbjct: 89 SYELPNPGIASVKVRSDSKIFATGGWDYKLRIFSWKSCKPLAVLEYHKGTLQALAFSGPSINGKQLLACGANDTKISIWDVY 170
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A1I8MPP1_MUSDO (Uncharacterized protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8MPP1_MUSDO) HSP 1 Score: 77.0 bits (188), Expect = 1.350e-13 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query: 36 QHPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSH-DGSVTSIAHSQ------RIGGFASGSADSRVALWNMF 257
++PG C++IR DQK+F +GGWD RVR FSW+S RPLA+L H G++ IA+S R A DS+++LWN++
Sbjct: 246 KNPGLNCLKIRNDQKVFSAGGWDGRVRIFSWKSLRPLAVLTEHKSGAIMDIAYSTGPVAMWRAPIMAVAGMDSQISLWNIY 326
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A1A8UH36_NOTFU (G protein subunit beta 1 like n=6 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8UH36_NOTFU) HSP 1 Score: 77.0 bits (188), Expect = 1.360e-13 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query: 39 HPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHS------QRIGGFASGSADSRVALWNMFPDGGG 272
+PG + + IR D ++ S GWD RVR FSW++ RPLA+L+ H V S+A S QR+ A+GS D R++LW+++ DG G
Sbjct: 245 NPGVSQLCIREDGRILASAGWDDRVRIFSWKTLRPLAVLQYHTDMVLSVAFSDHQDPRQRL--LAAGSKDQRISLWSIYNDGAG 326
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Match: A0A1L8DM75_9DIPT (Putative g-protein beta subunit-like protein gnb1l (Fragment) n=2 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DM75_9DIPT) HSP 1 Score: 77.0 bits (188), Expect = 1.490e-13 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 3
Query: 36 QHPGTACVEIRRDQKLFVSGGWDHRVRAFSWRSPRPLAILRSHDGSVTSIAHSQ------RIGGFASGSADSRVALWNMF 257
++PG +C+ IR D+K+FVSGGWD RVR FSW+S RPLA+L H ++ IA S + A DS++ LW+++
Sbjct: 260 KNPGVSCLRIRPDRKIFVSGGWDGRVRVFSWKSLRPLAVLTEHKKNILDIAFSPGPVDLWKAPLMAIAGEDSQITLWDLY 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15512.3612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15512.3612.1 >prot_H-elongata_contig15512.3612.1 ID=prot_H-elongata_contig15512.3612.1|Name=mRNA_H-elongata_contig15512.3612.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp MRRGPHLPFPAPGNRVCRDPSGSETVRVWGLGSQGEGVQLEKSATPGYPQback to top mRNA from alignment at H-elongata_contig15512:4380..5129- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15512.3612.1 ID=mRNA_H-elongata_contig15512.3612.1|Name=mRNA_H-elongata_contig15512.3612.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=750bp|location=Sequence derived from alignment at H-elongata_contig15512:4380..5129- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15512:4380..5129- >mRNA_H-elongata_contig15512.3612.1 ID=mRNA_H-elongata_contig15512.3612.1|Name=mRNA_H-elongata_contig15512.3612.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig15512:4380..5129- (Himanthalia elongata Himel1 dioecious)back to top |