mRNA_H-elongata_contig154848.3601.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: D7FM90_ECTSI (Protein disulfide-isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM90_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.630e-39 Identity = 73/110 (66.36%), Postives = 86/110 (78.18%), Query Frame = 1
Query: 13 SQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
++VD DAH+DL ++YGV GFPTLKL K GKPSDY GGRTA D+ YVIKKSGP+AKTL T A AFEGE EAVV+GLF S DS AK ++S A GIDRLPF SS+++V
Sbjct: 82 AKVDCDAHKDLAKEYGVGGFPTLKLLKEGKPSDYQGGRTADDIIKYVIKKSGPAAKTLTTKAEATAFEGEDEAVVLGLFSSADSPEAKTFMSVANGIDRLPFATSSTKEV 191
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A6S7IU76_PARCT (Protein disulfide-isomerase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IU76_PARCT) HSP 1 Score: 120 bits (300), Expect = 9.570e-30 Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 16 QVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
+VDA H +L K+GV G+PT+K FKGGKP +Y GGRTA D+ ++++KK+GP AK+LET + K F E E V+G F V+SA AKAY S A GID + FGI S+ D+
Sbjct: 82 KVDATIHTELATKFGVQGYPTIKFFKGGKPVEYGGGRTANDIVSWLVKKTGPPAKSLETSDDVKKFIEEREVAVVGFFGDVESAEAKAYTSAADGIDDVEFGIVSNADI 190
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A6J0BU80_NEOLC (Protein disulfide-isomerase n=5 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BU80_NEOLC) HSP 1 Score: 114 bits (285), Expect = 1.740e-27 Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 16 QVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
+VDA +L +++GV G+PTLK F+ G P +Y GGR A D+ N+V+KK+GP AK+L +V+ AKAF VIG FK DS AAK ++ A +D PFGISSSEDV
Sbjct: 85 KVDATVETELAEEHGVRGYPTLKFFRKGSPVEYGGGRQADDIVNWVLKKTGPPAKSLASVDEAKAFIDGNNVAVIGFFKDTDSDAAKLFLDVANSVDDQPFGISSSEDV 193
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A210QSX6_MIZYE (Protein disulfide-isomerase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QSX6_MIZYE) HSP 1 Score: 114 bits (284), Expect = 2.520e-27 Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 16 QVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
+VDA LG+K+GV G+PTLK F GG+PS+Y GGR A ++ N++ KK+GP TL+ V AK F + VVIG FK ++SA AKAY A GID +P GI+S+ DV
Sbjct: 81 KVDATIESSLGEKFGVKGYPTLKFFSGGQPSEYQGGRQAPEIVNWLKKKTGPPCTTLDDVAAAKKFAESDDVVVIGFFKDLESAEAKAYEKAAKGIDDVPLGITSNADV 189
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A812MBG5_9DINO (Protein disulfide-isomerase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MBG5_9DINO) HSP 1 Score: 113 bits (282), Expect = 2.560e-27 Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 13 SQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSED 339
++VDA A+R+LG ++ V GFPTLK F+GGKP++Y GGRTA ++ N+V KKSGP+ K LE + KAF + E V+G F + AA A+ + AG +D +PFGI + D
Sbjct: 22 AKVDATANRELGDRFDVRGFPTLKFFRGGKPTEYGGGRTADEIVNWVTKKSGPAFKVLEGADGVKAFAADAEVAVVGFFSDDSTDAAAAFKAVAGAVDSVPFGIVADAD 130
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A7I8W264_9ANNE (Protein disulfide-isomerase n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W264_9ANNE) HSP 1 Score: 113 bits (283), Expect = 3.060e-27 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 1 PHMSSQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
P +VDA + L +K+ + GFPTLK F+ G P+DY GGR A D+ N+V KKSGP A LE VE AKAF + + V++G FK+ + A AKA+++ A D LP GIS E V
Sbjct: 83 PVKLGKVDATVEKKLAEKFKIGGFPTLKFFRNGNPTDYKGGRQANDIVNWVTKKSGPPAINLENVEAAKAFVDKDDVVIVGFFKNAEDAEAKAFLNVAAAFDDLPIGISYDEAV 196
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: I6QQ41_MYTGA (Protein disulfide-isomerase n=4 Tax=Mytilus TaxID=6548 RepID=I6QQ41_MYTGA) HSP 1 Score: 112 bits (281), Expect = 6.290e-27 Identity = 54/110 (49.09%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 13 SQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
++VDA LG+KY V G+PT+K F+ G P+DYSGGR + D+ N++ KK+GP+ TL++V+ AKA + E VVIG FK + S +AK Y A GID +PFGI+S+ D+
Sbjct: 79 AKVDATVETSLGEKYEVRGYPTIKFFRSGTPTDYSGGRQSADIVNWLKKKTGPACVTLDSVDAAKAMIEKDEVVVIGFFKDLKSDSAKEYEKAAQGIDDIPFGITSNTDI 188
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A5N5ST34_9CRUS (Protein disulfide-isomerase n=2 Tax=Armadillidium TaxID=13346 RepID=A0A5N5ST34_9CRUS) HSP 1 Score: 112 bits (281), Expect = 7.340e-27 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 1 PHMSSQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
P +VDA L +++GV G+PTLK FK GKP+DY GGR + ++ N+++KK+GP AK + +VE AK+ V+IG FK DSA AK ++ AG ID PFGI+S E V
Sbjct: 77 PIKLGKVDATEESSLAEEHGVRGYPTLKFFKNGKPADYGGGRQSEEIVNWLLKKTGPPAKDISSVEDAKSLISTKNVVIIGFFKDKDSATAKEFLGAAGSIDDFPFGITSDESV 190
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: A0A016SRW2_9BILA (Protein disulfide-isomerase n=9 Tax=Strongylida TaxID=6308 RepID=A0A016SRW2_9BILA) HSP 1 Score: 112 bits (280), Expect = 8.450e-27 Identity = 51/108 (47.22%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 13 SQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSE 336
+++DA H D+ K+ V G+PTLKLF+ GKPS+Y+GGR A + ++ KK+GP AKTL+T + K+ + E + VV+G +K+VD AK ++ AGGID +PFGI+S +
Sbjct: 79 AKLDATVHGDVASKFEVRGYPTLKLFRNGKPSEYTGGRDAASIIAWLKKKTGPVAKTLKTADDVKSLQEEADVVVVGYYKNVDGEKAKIFLEVAGGIDDIPFGITSED 186
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Match: UPI001F4FB88A (protein disulfide-isomerase n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FB88A) HSP 1 Score: 112 bits (280), Expect = 8.570e-27 Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 13 SQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIKKSGPSAKTLETVEMAKAFEGEGEAVVIGLFKSVDSAAAKAYISTAGGIDRLPFGISSSEDV 342
++VDA DL +K+GV G+PTLK F+ G P DY+GGRT+ D+ N+++KK+GP AK L +VE AK+F VV+G FK S+AAK ++ A ID P GISSS+DV
Sbjct: 80 AKVDATEETDLAEKHGVRGYPTLKFFRKGSPVDYTGGRTSDDIVNWLLKKTGPVAKELGSVEEAKSFIDGDNVVVVGFFKDQGSSAAKVFLEAAATIDDHPIGISSSDDV 189 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154848.3601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig154848.3601.1 >prot_H-elongata_contig154848.3601.1 ID=prot_H-elongata_contig154848.3601.1|Name=mRNA_H-elongata_contig154848.3601.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp MSSQVDADAHRDLGQKYGVSGFPTLKLFKGGKPSDYSGGRTAMDLANYVIback to top mRNA from alignment at H-elongata_contig154848:1..936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig154848.3601.1 ID=mRNA_H-elongata_contig154848.3601.1|Name=mRNA_H-elongata_contig154848.3601.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=936bp|location=Sequence derived from alignment at H-elongata_contig154848:1..936+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig154848:1..936+ >mRNA_H-elongata_contig154848.3601.1 ID=mRNA_H-elongata_contig154848.3601.1|Name=mRNA_H-elongata_contig154848.3601.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at H-elongata_contig154848:1..936+ (Himanthalia elongata Himel1 dioecious)back to top |