mRNA_H-elongata_contig154705.3593.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 197 bits (501), Expect = 5.460e-59 Identity = 103/203 (50.74%), Postives = 143/203 (70.44%), Query Frame = 1
Query: 13 DFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAG-TLPWQLECTEE 618
+F GK+G + FT Q AQR+SRNRAAGTM TK ++VTK +K+ + D V P IK +R P R +++Q DN H +N DP++ AA +DGWDIR++NQP+ SPDTNILDLGFFN++QSLQDR TP+ +D+ I VK A+EE SP+ ++VW+SLQA L+ I+LA+G N++KLPHL K +G ++P +L + E
Sbjct: 87 NFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIK---ARWPGGRG---RTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAE 282
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: A0A8I6WKB7_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WKB7_HORVV) HSP 1 Score: 185 bits (469), Expect = 8.620e-55 Identity = 96/209 (45.93%), Postives = 135/209 (64.59%), Query Frame = 1
Query: 1 ENNSDFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEVWA 627
E N F GKIG +PF ++ AQR S NR GTM TK+I V + ++ + + ++P I+ + A + ++++QDNA+PH++ NDPE A S G DIR++ QPA SPD N LDLGFFNS+QSL D +P+ + DLIK V + +E LNRV+LSLQAC+ I+ G N YK+PH++K RLE+ G LP +L C +EV+A
Sbjct: 57 EGNVTFSGKIGIWPFVKEIPAQRKSDNRPRGTMETKSIKVNRQVMREFMIENLLPAIQSSWPDNDAGQT-----IFIKQDNAKPHILPNDPEFLVAVESTGLDIRLIQQPANSPDLNGLDLGFFNSLQSLTDCLSPRTLQDLIKGVLEEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHVNKERLESLGLLPQRLTCPQEVYA 260
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: UPI00053F3BA8 (uncharacterized protein LOC104908869 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3BA8) HSP 1 Score: 187 bits (475), Expect = 1.510e-54 Identity = 98/208 (47.12%), Postives = 139/208 (66.83%), Query Frame = 1
Query: 1 ENNSDFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTI-DVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEV 621
E S +DGKIG YPF +V A+R S NR AGT+ TK I +TK ++ L VIP IK+ + PP + +W+QQDNARPH+ + D + A +SDG+++R++NQPA+SPD N+LDLGFFN+IQSL+D+ PK +D LIKVV+ A++E P + NR++LSLQ C+ ++ +G N+Y PH+ K R+E G LP E E+
Sbjct: 162 EGVSIWDGKIGIYPFVDKVPAKRRSNNREAGTLETKPITSITKEVMRQKLIQSVIPAIKQKW--PPYACKD----IWIQQDNARPHIDSTDADFIEAATSDGFNMRLVNQPAQSPDLNVLDLGFFNAIQSLKDQKAPKTVDKLIKVVQAAYDEYDPKLGNRIFLSLQYCMIEVLKLKGNNNYNPPHVGKQRMEREGVLPISAEIPREL 363
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 189 bits (480), Expect = 4.730e-54 Identity = 100/210 (47.62%), Postives = 138/210 (65.71%), Query Frame = 1
Query: 16 FDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEVWAMGSSAL 645
FDGKIG + FT +V A R+SRNR AGT+ T+ + VT+ YK ML D+VIP IK S+ P+SA R V +QQDNARPH+ +D + A S GW+++++ QP SPD NILDLGFF +IQSLQ++ +NIDD+I AW ++ + LN +L+LQ C++ I+ A+G+N+YK+PH+ K +L G LP L EV A G L
Sbjct: 236 FDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIK---SKWPSSAG---RNVIIQQDNARPHVPPSDSAIVDACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGKAKLAARGRLPEVLSVDSEVVACGFDLL 439
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: UPI0014933F33 (uncharacterized protein LOC117838342 n=2 Tax=Setaria viridis TaxID=4556 RepID=UPI0014933F33) HSP 1 Score: 181 bits (459), Expect = 3.780e-53 Identity = 93/207 (44.93%), Postives = 133/207 (64.25%), Query Frame = 1
Query: 1 ENNSDFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEV 621
E FDGK+G +PF + AQR S NR GT +TKT+ V + + K + +++ I+ R P ++E I+W+QQDN+ H+ +DP+ A + G DIR++NQPA SPD N LDLGFF S+QS+ DRTT +N+DD+I V + +E +P +LNRV+L+LQ C+ +M G N YK+PH++K RLE AG LP L C E+
Sbjct: 72 EGRCYFDGKLGCWPFVREEPAQRRSDNRPRGTPITKTMKVDRQTMKSYMITKLLEAIR---IRWPQEDANE--IIWIQQDNSPSHIHADDPDFKTAVAHTGLDIRIMNQPANSPDMNCLDLGFFASLQSMTDRTTSRNMDDIIANVINEYEHYNPVILNRVFLTLQGCMIEVMKDNGGNRYKIPHMNKPRLEAAGMLPKYLSCDREI 273
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: UPI002008F387 (uncharacterized protein LOC125210222 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI002008F387) HSP 1 Score: 186 bits (472), Expect = 6.720e-53 Identity = 102/208 (49.04%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 16 FDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTI-DVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEVWAMGS 636
FDGKIG +PFT QV A+R S+NR GT+ TK I V K + ++ L +++IP IK + PA+AS E +++QQDNA+PHL ++D + AA S+DG+ +++QPA SPDTN+LDLGFF +IQSLQD NID+L+ V ++EE +P LN+V+L+LQ+CL I+ G N+YK+PHL+K RL LP LE EE GS
Sbjct: 265 FDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKW---PANASKE---IYIQQDNAKPHLTSSDFQFEAAASTDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQDDKLATNIDELLANVWSSFEELTPQTLNKVFLTLQSCLSKILEVHGGNNYKIPHLNKDRLSRTVGLPTSLE-VEETLVRGS 465
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: A0A452XZT7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XZT7_AEGTS) HSP 1 Score: 182 bits (463), Expect = 7.490e-53 Identity = 96/209 (45.93%), Postives = 131/209 (62.68%), Query Frame = 1
Query: 1 ENNSDFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEVWA 627
E N F GKIG +PF +V AQR S NR GT+ TK+I V + ++ + + ++P I+ + A + +++QQDNA+PH++ NDPE AA G DIR++ QP SPD N L+LGFFNS+QSL D +P+ + DLIK V D +E LNRV+LSLQAC+ I+ G N YK+PH +K RLE G LP +L C EV+A
Sbjct: 143 EGNVTFSGKIGIWPFVKEVSAQRRSDNRPRGTLETKSIKVNRQVMREFMIENLLPAIQASWPENDAGQT-----IYIQQDNAKPHILPNDPEFVAAVERTGLDIRLIQQPVNSPDLNGLELGFFNSLQSLTDCLSPRTLQDLIKGVLDEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHANKERLENLGMLPPRLTCPREVYA 346
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: UPI00098AC6DC (uncharacterized protein LOC109746020 n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI00098AC6DC) HSP 1 Score: 180 bits (456), Expect = 7.810e-53 Identity = 98/219 (44.75%), Postives = 139/219 (63.47%), Query Frame = 1
Query: 1 ENNSDFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEVWAMGSSALVELE 657
E N F GK G +PF +V AQR S NR GT+ TK+I V + ++ L ++V+P I+ V+ S+ + +++QQDNA+PH++ +DPE AA + G DIR++ QPA SPD N+LDLGFFNS+QSL D +PK + LIK V + +E LNR++L+LQ C+ I+ G N YK PH++K RLE G LP +L C EV+ ++AL LE
Sbjct: 56 EGNMTFSGKTGIWPFVKEVPAQRRSDNRPRGTIETKSIKVDRKVMREFLIEKVLPAIQAVWLE-----SNAGQAIYIQQDNAKPHILLDDPEFLAAVAKTGLDIRIIQQPANSPDLNVLDLGFFNSLQSLTDCLSPKTLQVLIKGVLEEFEGYEVYKLNRIFLTLQTCMIEILNHAGGNEYKTPHVNKERLEGLGQLPPRLSCPREVY---TNALHNLE 266
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA) HSP 1 Score: 185 bits (469), Expect = 8.110e-53 Identity = 98/203 (48.28%), Postives = 140/203 (68.97%), Query Frame = 1
Query: 16 FDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTID-VTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTEEV 621
FDGK+G +PFT V AQR+S+NR GT+ TK I VT+ ++ L +++IP I S+ P SAS E +++QQDNA+PH+ DPE A +S+G+ I+++ QP SPDTNILDLGFF +IQSL+D+ N+D+L++ V A+EE +P LN+V+L+LQ+ L I+ +G N+YK+PH++K RLE G LP LE E V
Sbjct: 225 FDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAI---HSKWPTSASKE---IYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIGALPNVLEVEERV 421
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Match: UPI001C25E3EC (uncharacterized protein LOC121760632 n=15 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25E3EC) HSP 1 Score: 185 bits (470), Expect = 9.190e-53 Identity = 97/201 (48.26%), Postives = 138/201 (68.66%), Query Frame = 1
Query: 16 FDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTID-VTKVSYKKMLTDRVIPDIKRVFSRPPASASSEDRIVWLQQDNARPHLVNNDPELTAAFSSDGWDIRMLNQPAKSPDTNILDLGFFNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSLQACLEHIMLAEGENSYKLPHLHKGRLETAGTLPWQLECTE 615
FDGKIG +PFT Q+ AQRSS+NR GTM TK I +TK L +++IP IK + PA+AS + +++QQDNA+PHL D + A S+DG++ +++QP SPDTN+LDLG+F +IQSLQD ++DDL++ V +++EE SP LNRV+++LQ+CL I+ G+N YK+PH++K RLE LP QL+ E
Sbjct: 247 FDGKIGLFPFTEQIPAQRSSKNRPKGTMETKPIQSITKEVMTACLINQIIPSIKAKW---PANASKK---IFIQQDNAKPHLRAADHQFEALASTDGFEFHLISQPPNSPDTNVLDLGYFRAIQSLQDDKMATSVDDLLRNVFNSFEELSPQTLNRVFITLQSCLTAILQVHGKNDYKIPHMNKNRLERTEGLPLQLQVEE 441 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154705.3593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig154705.3593.1 >prot_H-elongata_contig154705.3593.1 ID=prot_H-elongata_contig154705.3593.1|Name=mRNA_H-elongata_contig154705.3593.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp ENNSDFDGKIGFYPFTHQVRAQRSSRNRAAGTMVTKTIDVTKVSYKKMLTback to top mRNA from alignment at H-elongata_contig154705:372..1028+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig154705.3593.1 ID=mRNA_H-elongata_contig154705.3593.1|Name=mRNA_H-elongata_contig154705.3593.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=657bp|location=Sequence derived from alignment at H-elongata_contig154705:372..1028+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig154705:372..1028+ >mRNA_H-elongata_contig154705.3593.1 ID=mRNA_H-elongata_contig154705.3593.1|Name=mRNA_H-elongata_contig154705.3593.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig154705:372..1028+ (Himanthalia elongata Himel1 dioecious)back to top |