mRNA_H-elongata_contig15377.3547.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 1.950e-128 Identity = 252/461 (54.66%), Postives = 298/461 (64.64%), Query Frame = 1
Query: 1 VALCVMLDRIAEVDARARPARGLAPRSRGEQVKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLLGCV------------SAQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTPLLTRRI--------------------------------ARSAGGGRMRPGLPTTGRRVLGGGGGI--------GGGDFARR-YDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPS------LTAARIGVICLYKAQLAEVRRQLESA 1206
VALCVM+DRIA DAR R +RGL PR + EQV+VLLA+GTNVAVDRVL GL+ GFD IAR+GS+RRTHKSLL V + Q +LQ MLKTA+G ER + AL+A K +SF DQA RLR+ARVTGVTCASAT PLLTR A++AG + G+ + R LGGG G GGG+ RR YDIV+LDECSQIVEP+SLLP++VA+P+RLVLVGDPMQLPPP+A AR +P+ E +EK NA GNGDTLEKTLFVRLA LG+ PLLLGRQYRCHP++S LASRLFYQ RL+DG++A DR PLVP LAPLTL+DA GR AEST A GGS N FEAR VAD+V +LL G + ++ A IG+ICLYKAQLA+VRR+LESA
Sbjct: 265 VALCVMVDRIAAADARLRSSRGLPPRPKAEQVRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGAERDEIGRALQASKAESFTTDQAKRLREARVTGVTCASATVPLLTRPPRSPRPLPRGGVVSGGNGSNSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRRLGGGRGSXXERGWSGGGGEGRRRGYDIVVLDECSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARAR--MPK------------------------EAWLEKVNARPGNGDTLEKTLFVRLAKLGVQPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAEST--APGGSIKNAFEARAVADVVVSLLRAGSSNXXXXXXXXXXXXVSVASIGIICLYKAQLAQVRRELESA 697
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: D8LH01_ECTSI (Prematurely terminated mRNA decay factor-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH01_ECTSI) HSP 1 Score: 374 bits (961), Expect = 2.600e-120 Identity = 251/487 (51.54%), Postives = 295/487 (60.57%), Query Frame = 1
Query: 1 VALCVMLDRIAEVDARARPARGLAPRSRGEQVKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLLGCV------------SAQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTPLLTRR-----------------------IARSAG---------GGRMRP-GLPTTGRRVLGGGGGIGGG---------DFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTV--EGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESA---LPGGRERTPPSSCRPRDVQVPLGSTR 1284
VALCVM+DRIA DAR RP+RGL PR + EQ++VLLA+GTNVAVDRVL GL+ GFD IAR+GS+RRTHKSLL V + Q +LQ MLKTA+G +R + AL+A K +SF DQ RLR+ARVTGVTCASAT PLLTR AR G G RP G+ + R+LGGG G G R YDIV+LDE SQIVEP+SLLP++VA+P+RLVLVGDPMQLPPP+A ARS + Q+ + + +EK NA GNGDTLEKTLFVRLA LG+ PLLLGRQYRCHP++S LASRLFYQ RL+DG++A DR PLV LAPLTL+DA GR AEST A GGS N FEAR VAD+V++LL G KAQLA+VRR+LESA PG P SS P D P G R
Sbjct: 165 VALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPLPRGGVVSGGNGSNGSVAARKTGVATGGTKTAGPWKRPAGVAGSNGRLLGGGRGSAGARGWSXXXXXGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVSGLAPLTLLDAAGRGAEST--APGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXD-------KAQLAQVRRELESASCATPGAAS-IPSSSSSPDDGVQPGGEGR 641
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A835T389_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T389_9CHLO) HSP 1 Score: 170 bits (431), Expect = 2.160e-42 Identity = 137/384 (35.68%), Postives = 185/384 (48.18%), Query Frame = 1
Query: 94 VKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLL-----------GCVSAQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESALP 1212
V+VLLA+ TNVAVDRVL GL GF R+GS R K +L G A +L+ LK A + + A L A+ + + + LR V G T S P + +GGG + +V+LDECSQ+ EPL L+P+ AR + LV GDP QLPP IA PAS Q + + + D+L + LFVRL+ LG P LL QYRCHPRLS +A+ FY+ RL DGI+ DR PL+P L PL V++GG++A A S N EA++V+ +V+ LL G ++A +GVIC Y+AQ+A +RR L+ A P
Sbjct: 1255 VRVLLASHTNVAVDRVLIGLQDAGFGDFLRLGSVDRIAKPVLHRSLRAGGDDGGRGDAAAELRRALKDASPADAAYINAELAALAAGAEKLRRRA-LRTCPVVGATICSLLQP---------------------SSEDHMGGG-----------FTVVVLDECSQMTEPLCLVPLLRARARFLVAAGDPQQLPPVIAS------------------PASLTAPHHQPNHPAHHHQARQRQAHADSLLRPLFVRLSQLGHVPHLLSYQYRCHPRLSSIANAAFYEGRLRDGITPADRPPLLPRLPPLVFVESGGQAAVD---AYTRSSYNTQEAQLVSRVVAVLLEQG---------VSADEVGVICFYRAQVAAIRRALQQAGP 1575
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A2K3E7V6_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7V6_CHLRE) HSP 1 Score: 168 bits (426), Expect = 9.830e-42 Identity = 142/389 (36.50%), Postives = 190/389 (48.84%), Query Frame = 1
Query: 94 VKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLL-----------GCVSAQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATR-LRDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLL-PRGRHSSKTVPPLPASS-ECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESALPGG 1218
V+VLLA+ TNVAVDRVL GL GF R+GS R K +L G A +L+ LK A + + A L A+ + A Q R LR V G T S P + +G G + +V+LDECSQ+ EPL L+P+ A+ + LV GDP QLPP IA +L P +H P PAS + G + P D+L + LFVRL LG P LL QYRCHPRLS +A+ FY+ RL DG++ DR PL+ L PL V++GG++A A S N EA++V+ +V+ALL G ++A +GVIC Y+AQ+ +RR L+ A GG
Sbjct: 1308 VRVLLASHTNVAVDRVLVGLQDAGFGDFLRLGSVDRIAKPVLHRSLRAGGDDSGRGDAAAELRRALKDASPADAAYINAELAALA--AGAEKQRRRALRTCPVVGATICSLLQP---------------------SSEDHMGSG-----------FTVVVLDECSQMTEPLCLVPLLRAKARFLVAAGDPQQLPPVIASPANLTAPAPQHQ-----PGPASGLQWGPGAVGAAGAGSQRGHPGAATDSLLRPLFVRLCQLGHAPHLLSYQYRCHPRLSSIANAAFYEGRLRDGVTPADRPPLLVGLPPLVFVESGGQAAVD---AYTRSSYNTQEAQLVSRMVAALLAQG---------VSADEVGVICFYRAQVGAIRRALQQADAGG 1645
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A5B8MBU6_9CHLO (P-loop nucleoside triphosphate hydrolase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MBU6_9CHLO) HSP 1 Score: 165 bits (417), Expect = 1.150e-40 Identity = 129/380 (33.95%), Postives = 179/380 (47.11%), Query Frame = 1
Query: 88 EQVKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLLG-CVSAQVD--------LQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLE 1200
EQV VL++A TNVAVD +L GL+ GF+ + RIGS R+ LL + +++D L++M+K A+ +R L V ++ L ARV GVTC S+T LL R++DIV+LDECSQI+EPLS++PI ++ L+ VGDP QLPP +A PA S R G T+ + LF RL LG LL QYRCHP L LA+ LFY RL +G S EDR+ ++P PL L D G+ GG F N+ EA++ D+ ++G G IP+ IG++C Y+ Q+ VR+ +E
Sbjct: 600 EQVNVLISANTNVAVDHILNGLIRKGFEDLGRIGSVRKIDPKLLKYTIHSKLDSRKEVMKELKEMIKVALPSDRAFYEEELR-VLQNKTKTKNLESLSCARVVGVTCHSSTNSLLD-----------------------------------DRKFDIVILDECSQIIEPLSMVPILRSKASHLIAVGDPHQLPPVVAS------------------PARS-------------------RSGGPTIFRPLFSRLLQLGYPSTLLDTQYRCHPCLGNLANILFYGGRLKNGCSEEDRQSMIPGCHPLVLCDCKGKDEYHQ----GGIF-NVKEAKLCVDIFEKVVGWG------IPT---QEIGILCFYREQVNRVRQLIE 892
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A835VRR1_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VRR1_CHLIN) HSP 1 Score: 165 bits (417), Expect = 1.490e-40 Identity = 141/387 (36.43%), Postives = 187/387 (48.32%), Query Frame = 1
Query: 94 VKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLL-----------GCVSAQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATR-LRDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENA--PRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESALP 1212
V+VLLA+ TNVAVDRVL GL GF R+G+ R K +L G A +L+ LK A + + A L A+ + A Q R LR V G T S P + GGG + +V+LDECSQ+ EPL L+P+ A+ + LV GDP QLPP IA +L ++ P PA Q+ G P D+L + LFVRL+ LG P LL QYRCHPRLS +A+ FY RL DG+ DR PL+ L PL V++GG++A A S N EA++V+ +V+ALL G G+P A +GVIC Y+AQ+ +RR L+ A P
Sbjct: 1316 VRVLLASHTNVAVDRVLIGLQDAGFRDFLRLGAVDRIAKPVLHRSLRSGGDDGGRGDAAAELRRALKDASPSDAAYINAELAALA--AGAEKQRRRALRTCPVVGATICSLLQPSSEDHV---------------------------GGG-----FSVVVLDECSQMTEPLCLVPLLRAKARFLVAAGDPQQLPPVIASPATL------TAPQHPQHPAGP-AHHLQQRGPGAAAGGTLGHPGAAADSLLRPLFVRLSQLGHVPHLLSYQYRCHPRLSSIANAAFYGGRLRDGVRPADRPPLLAALPPLVFVESGGQAAVD---AYTRSSYNTQEAQLVSRVVAALL------GQGVP---AEEVGVICFYRAQVGAIRRLLQQAGP 1649
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: UPI000D1CA8B5 (protein ZGRF1-like n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CA8B5) HSP 1 Score: 162 bits (411), Expect = 4.990e-40 Identity = 127/371 (34.23%), Postives = 172/371 (46.36%), Query Frame = 1
Query: 97 KVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLL---------GCVS---AQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQ 1173
+ ++A+ TN AVDRVLTGL+ GFD R+GS + ++L C A+ DL+ +LK A+G ER + L+A+K D + TRL+ R GVTC S +L + + LDECSQIVEPLSLLPIS R +RLV VGDP QLPP ++ +E F K+ + L +TLF RLAALG P+ L QYRCHPRLS + +RLFY+ RL DG S +R L+ ++ PL D E G S+ N +EA V V L+ +++ ++IGVI LYK+Q
Sbjct: 504 RFIIASATNSAVDRVLTGLLEHGFDDFLRVGSLGKIASNILPYSVHAASKNCKEEDDAEKDLKGLLKDAVGKERARIENELKAIK-DGKLNHRKTRLQKVRAVGVTCCSTINEVL-----------------------------------HGNTFKMCFLDECSQIVEPLSLLPISQFRCERLVAVGDPQQLPPVLS---------------------PTETNSFAKSAD---------------LSRTLFERLAALGHRPVPLQTQYRCHPRLSRVPNRLFYEGRLVDGCSEMERSALLLSIPPLVFCDTCKEGKEKKDFLTG-SYSNPYEAETVCSFVKLLIS---------KTISGSQIGVIALYKSQ 792
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A150GZB2_GONPE (AAA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZB2_GONPE) HSP 1 Score: 161 bits (408), Expect = 2.060e-39 Identity = 139/377 (36.87%), Postives = 182/377 (48.28%), Query Frame = 1
Query: 94 VKVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLLGCVSAQVDLQDMLKTAIGDERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTP----LLTRRIARSAGGGRM--RPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESA 1206
V+VLLA+ TNVAVDRVL GL GF R+GS R K +L +++ + D AT LR A ATTP + +A A G R L T V G GG + +V+LDECSQ+ EPLSL+P+ AR + LV GDP+QLPP IA SL+P PP ++ A G D+L + LFVRL+ LG P LL QYRCHP ++ +A+ FY RL DG+SA DR PL+P L PL V++GG++ A S N EA++VA VSA+L G G +GVIC Y+AQ+ +RR L++A
Sbjct: 674 VRVLLASHTNVAVDRVLIGLQDAGFADFLRLGSVDRIAKPVLH---------------------------RSLRAGEDSRDTATELRRA------LRDATTPSDVAYIEAELAALAAGAEKARRKALRTC--PVDGCGGS---------FTVVVLDECSQMTEPLSLVPLLRARARYLVAAGDPLQLPPVIASPASLMP-------APPPHETATATA--------------ASDGPLDSLLRPLFVRLSQLGHQPHLLSYQYRCHPMVASIANNAFYGGRLRDGVSAADRGPLLPGLPPLVFVESGGQAQVD---GATRSSYNTAEAQLVARAVSAMLDVGLEPGS---------VGVICFYRAQVNAIRRALQAA 973
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A2P6VEY4_9CHLO (P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VEY4_9CHLO) HSP 1 Score: 160 bits (405), Expect = 5.290e-39 Identity = 133/384 (34.64%), Postives = 174/384 (45.31%), Query Frame = 1
Query: 97 KVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLLG----------CVSAQVDLQDMLKTAIGDERG-LVVAALEAVKRDSFAVDQATRL-RDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESALP 1212
+VL+AA TNVAVDRVL GL+ +G R+G RR + LL +A +L++MLK A G L V E + A Q RL + + G TC G +G +R+D+V+LDECSQ+VEPLS +P+ A + L+ GDP+QLPP +AH + P G P PA G L + LFVRL ALG+ P LL RQYRCHP +S + ++ FY RL DG + E R L+P L L L+D G+ S G S N EA V LV L+ G G + GVIC Y+AQ+A VR L+ LP
Sbjct: 916 RVLVAAHTNVAVDRVLLGLLESGCSEFLRVGPLRRVSRGLLRQSLHASESRTTATAAAELREMLKEAKGAPPAELAVIQSELAAAEKGADRQKKRLLKTVPIVGATCC-----------------------------------GCMGSSLEGQRFDVVVLDECSQMVEPLSAVPLLRAGARFLIAAGDPLQLPPVVAHPAHVAPSG--------PAPAGG--------------------GQRHGLLRPLFVRLQALGLPPFLLRRQYRCHPDISCVPNQQFYGGRLIDGCTREQRASLLPGLPSLALLDVRGQEQYS----GGRSASNQAEAEAVVALVERLVQAGVELG---------QCGVICFYRAQVALVRALLDRRLP 1223
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Match: A0A2P6TPK8_CHLSO (P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TPK8_CHLSO) HSP 1 Score: 159 bits (402), Expect = 1.380e-38 Identity = 129/383 (33.68%), Postives = 182/383 (47.52%), Query Frame = 1
Query: 97 KVLLAAGTNVAVDRVLTGLMGTGFDSIARIGSNRRTHKSLLG----------CVSAQVDLQDMLKTAIG-DERGLVVAALEAVKRDSFAVDQATRLRDARVTGVTCASATTPLLTRRIARSAGGGRMRPGLPTTGRRVLGGGGGIGGGDFARRYDIVLLDECSQIVEPLSLLPISVARPQRLVLVGDPMQLPPPIAHARSLLPRGRHSSKTVPPLPASSECRRFQKTVEGLVEKENAPRGNGDTLEKTLFVRLAALGMTPLLLGRQYRCHPRLSGLASRLFYQDRLSDGISAEDRKPLVPNLAPLTLVDAGGRSAESTPAAAGGSFVNIFEARVVADLVSALLGGGENEGDGIPSLTAARIGVICLYKAQLAEVRRQLESALP 1212
++L++A TNVAVDRVL GL+ +G R+G RR + LLG +A +L++MLK A +ER +V L A +R + + L+ + GVTC S+ L +++ +V+LDECSQ+VEPLS++P+ A+ + L+ GDP+QLPP +A + LP + Q + GL+ + LFVRLAALG+ P LL RQYRCHP ++ + + FY RL DG S E R L+P L L +D G+ S AG S N EA V V L G + G +IGVIC+Y+AQ+A VR+ LE LP
Sbjct: 1571 RMLVSAHTNVAVDRVLLGLLESGCTDFLRVGPLRRISRRLLGQSLHASDSKATGTAVAELREMLKEAGSPEERAVVQKELAAAERGADR-QRKKLLKTVPIVGVTCCSSMLAALDN-----------------------------------QQFQVVILDECSQMVEPLSVVPLLRAKAKFLIAAGDPLQLPPVVASPAHITAAPAGPGGGTRQLPGGGQQ---QGQLHGLL--------------RPLFVRLAALGLPPFLLRRQYRCHPDIAAVPNAQFYGGRLIDGCSREQRTSLLPGLPSLVFLDVRGQEQHS----AGRSASNQAEAEAVGAAVERLAAAGVSLG---------QIGVICIYRAQVALVRQLLERRLP 1887 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15377.3547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15377.3547.1 >prot_H-elongata_contig15377.3547.1 ID=prot_H-elongata_contig15377.3547.1|Name=mRNA_H-elongata_contig15377.3547.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=424bp MLDRIAEVDARARPARGLAPRSRGEQVKVLLAAGTNVAVDRVLTGLMGTGback to top mRNA from alignment at H-elongata_contig15377:240..4782+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15377.3547.1 ID=mRNA_H-elongata_contig15377.3547.1|Name=mRNA_H-elongata_contig15377.3547.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4543bp|location=Sequence derived from alignment at H-elongata_contig15377:240..4782+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15377:240..4782+ >mRNA_H-elongata_contig15377.3547.1 ID=mRNA_H-elongata_contig15377.3547.1|Name=mRNA_H-elongata_contig15377.3547.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2544bp|location=Sequence derived from alignment at H-elongata_contig15377:240..4782+ (Himanthalia elongata Himel1 dioecious)back to top |