mRNA_H-elongata_contig15370.3543.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15370.3543.1
Unique NamemRNA_H-elongata_contig15370.3543.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: D7FPZ3_ECTSI (Cryptochrome DASH n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPZ3_ECTSI)

HSP 1 Score: 681 bits (1757), Expect = 7.960e-241
Identity = 336/460 (73.04%), Postives = 373/460 (81.09%), Query Frame = 1
Query:    1 RRGTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGG-QATGTTLYTHTDVCSDEICVDNAVKRALTALT------GPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQR--CQIRTPVSAPGTLRPFPS--CGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
            RRGT++MSA+RCRFLLESVADL++RLR +GSDL+VR G+PEDVIP LA +LGG    G TL+ HTDVCS+E  V  AVK AL A +      G  VAVKE WGNT+H + DLPFDFP  +P IFTQFRK+VE +  C++R PV  P   RP P+    D   AS    +PT ++LG   APE+D  +V  F GGETAGL+RV+ YIW+EDRLR YK TRNGLLGSGFSSKFSPWLALGCLSP+TIV EIRKYE +RIANDSTYWLIFELLWRDFF YSAVKNGNSIFHLGGPR D  RQ W DDAGSLEAWK GETGYP IDANMRELKASGFMSNRGRQVVASFFT+DL MDWRLGAEHFEE+LLDHDPASNWGNWNYVAGVGSDPRE RYFNIEKQAKTYD EG Y+RHWLPELAALPTTALQ     +PGGITTMLRH+H +P  +YPDPI PLKFS
Sbjct:   67 RRGTSKMSAARCRFLLESVADLRARLRERGSDLLVRRGHPEDVIPALAARLGGGSVAGVTLFAHTDVCSEEADVHAAVKSALAAASSAGRGGGAAVAVKEAWGNTLHDVADLPFDFPSGVPEIFTQFRKSVESKYSCKMRPPVPLPSPFRPVPTGTTQDDGEASAPGAIPTTEELGLGTAPERDARSVFPFNGGETAGLRRVQSYIWDEDRLREYKVTRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLWRDFFRYSAVKNGNSIFHLGGPRRDTGRQRWLDDAGSLEAWKEGETGYPLIDANMRELKASGFMSNRGRQVVASFFTRDLQMDWRLGAEHFEEYLLDHDPASNWGNWNYVAGVGSDPREGRYFNIEKQAKTYDAEGAYMRHWLPELAALPTTALQ-----TPGGITTMLRHMHAIPTSVYPDPIAPLKFS 521          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: D7FPZ4_ECTSI (Cryptochrome DASH n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ4_ECTSI)

HSP 1 Score: 639 bits (1647), Expect = 1.840e-224
Identity = 312/466 (66.95%), Postives = 365/466 (78.33%), Query Frame = 1
Query:    1 RRGTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTAL----------TGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAAS--IITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKG 1362
            RRGT RMSA+RCRFLLESVADLQ+RLR +GSDL++R G+PE+ IP +A +LG  A+  T+Y H D+CS+E  V  AVK AL+ +          TG  V+V E+WGNT+H   DLP+DFP+ LP +FT FRKAVE  C+IR+PV  P   RP P+    NA +  +   +PT ++LG   APE+D  +VL F GGETAGL+RV+ YIWEED LR YK TRNGLLG GFSSKFSPWLALGCLSP+TIV EIRKYE +RIANDSTYWLIFELL RDFF YSAVK GN+IFHLGG R D+ RQ WRDDAG L AWK G TGYPF+DANMRELKASGFMSNRGRQVVASFFTKDL MDWRLGAEHFEE+LLD+DPASN+GNWNYVAGVG DPREDRYF++EKQA+TYD +G+Y+RHWLPELA L T ALQ     S GGIT  LR +H++P  +YPDP+VPLKF  P +G
Sbjct:   66 RRGTRRMSAARCRFLLESVADLQTRLRAKGSDLLIRRGHPENAIPAVAARLGSGASAVTVYAHPDLCSEENDVHAAVKSALSLVGSAGGVGGDATG--VSVTEVWGNTLHDPSDLPYDFPNGLPEVFTPFRKAVEPNCKIRSPVPLPSPFRPLPAGLHDNAVTPTLTVAIPTTEELGLGTAPERDARSVLHFIGGETAGLRRVQTYIWEEDHLREYKVTRNGLLGGGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLEMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYVRHWLPELAMLTTEALQ-----SAGGITATLREVHSVPTSVYPDPVVPLKFMMPKEG 524          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A9U403_PHYPA (Cryptochrome DASH n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U403_PHYPA)

HSP 1 Score: 463 bits (1192), Expect = 1.970e-155
Identity = 226/449 (50.33%), Postives = 299/449 (66.59%), Query Frame = 1
Query:   31 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPP---VAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKGGK 1368
            R +F++ESVA+L+  LR +G DLIVR G PEDV+P +A  +G      T+Y H + CS+E  V+  VKR L  L G P   + +  +WG T++HLDDLPF  P  LP+++TQFRK VE  C++R  +  P  + P P         +  ++PT+ +LG +   E+  + V+ F+GGETA L R++ Y W +D+L+ YKETRNG+LG+ +S+KFSPWLA GCLSP+TI  E+++YE ER+ANDSTYW++FEL+WRD+F + ++K GN+IFHLGGPR    ++ W  +    EAW+ G TGYP IDANM+EL A+GFMSNRGRQ+V SF  +DLG+DWR+G E FE  LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQ+ TYDPEGEY+ HWLP L   P                       N P   Y  PIVPLKF     GGK
Sbjct:  118 RAQFIMESVANLRDNLRQRGLDLIVRQGKPEDVVPSIAKSIGAH----TVYAHKETCSEETTVETGVKRGLANLEGGPKMQIRLDFVWGGTLYHLDDLPFS-PSELPDVYTQFRKGVEYNCKVRPALKMPTQMGPLPESLSEKIGEL-GDIPTMAELGLKYR-EQSPLGVMHFEGGETAALARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVANDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKR-WSQNRELFEAWREGRTGYPLIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQSATYDPEGEYVAHWLPSLKQSPPKQ-------------------RNFPGDAYLRPIVPLKFGM-GSGGK 538          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I9RMC3_ELAGV (Cryptochrome DASH n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RMC3_ELAGV)

HSP 1 Score: 456 bits (1173), Expect = 2.850e-152
Identity = 232/457 (50.77%), Postives = 301/457 (65.86%), Query Frame = 1
Query:    7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALT---GPPVAVKE-------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
            G  +  A R +FL+ES+ADL+  L   G DL+VR G PED++P +A  LG      T+Y   + CS+E+ V+  V+R L  +    G     K        IWG+TM+H+DDLPF+  + LP+++TQFRKAVE +C IR+    P +L P PS G  +  S    +PTL+QLG+    EK     + F GGE A L RV +Y WE D LR YKETRNG+LG  +S+KFSPWLA G LSP+ I  E+++YE++R+ANDSTYW++FEL+WRD+F + ++KNGNSIFHLGGPR    +  W  D    E+W+ G TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DPASN+GNW Y AGVG+DPREDRYF+I KQAKTYDPEGEY+ +WLPEL ALP                   +   N P + Y   +VPLKF 
Sbjct:  130 GFPKTGAFRAQFLIESLADLKKNLMKHGLDLLVRHGKPEDILPSVAKALGAH----TVYAQKESCSEELLVEELVRRGLHQVVIHEGESSKQKSVNPKLQLIWGSTMYHIDDLPFEAKN-LPDVYTQFRKAVESKCSIRSCFKLPASLGPLPS-GSLDEISGQGTIPTLEQLGYN---EKKFERGMHFVGGENAALGRVHEYFWENDMLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRYIYEEVKRYEKQRLANDSTYWVLFELIWRDYFRFLSIKNGNSIFHLGGPRKVMSK--WSQDQSLFESWRDGRTGYPLIDANMKELCTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRALP-------------------KDRRNFPGQSYIKQVVPLKFE 556          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: W7TQV2_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQV2_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 2.760e-151
Identity = 230/462 (49.78%), Postives = 306/462 (66.23%), Query Frame = 1
Query:    7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPF-DFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFP--SCGDGNAASIITEVPTLKQLGFEPAPEK------------DEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
            GT +    R RFLLE+V DL++RL   G ++IV+ G PE  +P LA  L        +Y H +V S+E+ V   VK  L+  T      +E+WGN ++H+DD+PF +    +P+IFTQFRKAVE + ++R  +  P +L+P P  S  + N  ++++ + TL+ LGF    +             D  +VL+FKGGETAGL R+++Y W++D L+ YKETRNG+LG  +SSKFSPWLA G +SP+ I +EIRKYERER+ NDSTYWL FEL+WRDFF +SA+  GN+ F LGGP+ + ++  W+ D     AWK G TGYP +DANMRELK +GFMSNRGRQ+VASF T+D+G++WRLGA  FEE LLD+DP SN+GNW Y AGVGSDPREDRYF++ KQ  TYDPE  YI+HW PEL  +P   L     L+P      +R    +   +YP  IVPLKF 
Sbjct:  135 GTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDF----VYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPL-TLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADIL-----LNPARFDGPVRAKFAVGEEVYPRQIVPLKFG 583          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I9RLI6_ELAGV (Cryptochrome DASH n=3 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9RLI6_ELAGV)

HSP 1 Score: 449 bits (1155), Expect = 1.430e-149
Identity = 231/457 (50.55%), Postives = 300/457 (65.65%), Query Frame = 1
Query:    7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALT---GPPVAVKE-------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
            G  +  A R +FL+ES+ADL+  L   G DL+VR G PED++P +A  LG      T+Y   + CS+E+ V+  V+R L  +    G     K        IWG+TM+H+DDLPF+  + LP+++TQFRKAVE +C IR+    P +L P PS G  +  S    +PTL+QLG+    EK     + F GGE A L RV +Y WE D LR YKETRNG+LG  +S+KFSPWLA G LSP+ I  E+++YE++R+ANDSTYW++FEL+WRD+F + ++KNGNSIFHLG PR    +  W  D    E+W+ G TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DPASN+GNW Y AGVG+DPREDRYF+I KQAKTYDPEGEY+ +WLPEL ALP                   +   N P + Y   +VPLKF 
Sbjct:  130 GFPKTGAFRAQFLIESLADLKKNLMKHGLDLLVRHGKPEDILPSVAKALGAH----TVYAQKESCSEELLVEELVRRGLHQVVIHEGESSKQKSVNPKLQLIWGSTMYHIDDLPFEAKN-LPDVYTQFRKAVESKCSIRSCFKLPASLGPLPS-GSLDEISGQGTIPTLEQLGYN---EKKFERGMHFVGGENAALGRVHEYFWENDMLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRYIYEEVKRYEKQRLANDSTYWVLFELIWRDYFRFLSIKNGNSIFHLG-PRKVMSK--WSQDQSLFESWRDGRTGYPLIDANMKELCTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRALP-------------------KDRRNFPGQSYIKQVVPLKFE 555          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: UPI0019E3F893 (DASH family cryptochrome n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019E3F893)

HSP 1 Score: 446 bits (1146), Expect = 1.680e-149
Identity = 226/448 (50.45%), Postives = 303/448 (67.63%), Query Frame = 1
Query:    7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRI-YPDPIVPLKFS 1347
            G  +  A R +FLLES+ADL+  LR  GSDLIVR G PE +IP+L      Q   + ++ H +V ++E  V+ A+K+AL A T P   +K+ WG+T++H DDLPFD   ++P +FT FRK VE++  +   +  P  L+  P   D      + E+P++  LG EP P  D  AVL F+GGE+AGL R++ YIWE+D LR YKETRNG+LG+ +SSKFSPWLALGCLSP+ I  ++ +YE ER+ NDSTYWLIFELLWRD+F +   K+GN +FH  G +       W+ D    + W+ G+TGYP +DANMREL A+GF+SNRGRQ VASF TK+LG+DWR+GAE FE  L+D+D  SNWGNWNY AGVG+D R  R+FNI KQAK YDP+G+Y++HWLPELA +P +     +I  P  +T   +  H + + + YP P+V L  S
Sbjct:   48 GFAKTGAFRAQFLLESLADLRRSLRELGSDLIVRSGKPEQIIPNLVQ----QWQISAVHYHQEVTAEEQRVEQALKKALAAQTIP---LKQFWGHTLYHPDDLPFD-QRSIPELFTAFRKQVEKQASVNPTLPGPRRLQALPEGID------VGEIPSVSDLGLEPVPP-DPRAVLPFQGGESAGLARLKHYIWEQDHLRRYKETRNGMLGANYSSKFSPWLALGCLSPRYIYEQVLQYEEERVRNDSTYWLIFELLWRDYFRFICQKHGNKVFHPSGLQ--GIDIPWKQDWQRFDLWREGQTGYPLVDANMRELAATGFISNRGRQNVASFLTKNLGIDWRMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDARGFRFFNITKQAKDYDPQGKYVKHWLPELANVPIS-----KIHEPWRLTAEEQKRHQVRLGVDYPHPVVDLFIS 473          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I5PL83_9CYAN (Cryptochrome DASH n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5PL83_9CYAN)

HSP 1 Score: 443 bits (1139), Expect = 1.980e-148
Identity = 234/441 (53.06%), Postives = 304/441 (68.93%), Query Frame = 1
Query:   31 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIIT-EVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRI-YPDPIVPLKFS 1347
            R +FLLESVADL+  L+ +GSDLI+R G PE VIP LA+++  QA    +Y H +  ++E+ V+NA+   L A TG  V  +  WG T++HLDDLPF  P  +P +FTQFRK VE+   +  P +AP  L   P        SI T  +PTL QLG E AP+ D+ AVL F GGETAGL R++ YIW+ D L+ YK+TRNG+LG+ +SSKFS WLALGCLSP+ +   ++ YE ER+ NDSTYWL+FELLWRD+F    +K+G+ +F+  G R D K   W+ D    EAW TG+TGYP +DANMREL A+GFMSNRGRQ VASF TK+LG+DWR+GAE FE  L+D+D  SNWGNWNY AGVG+D R  RYFNI KQ+K YDP+GEY++HWLPEL  LP     A ++  P  ++ + +   +L + + YP PIV L+ S
Sbjct:   54 RAQFLLESVADLRRSLQQRGSDLIIRWGEPETVIPALASEVNAQA----VYWHAEATAEELTVENALADKLQA-TGKKV--RTYWGATLYHLDDLPFS-PKKVPGVFTQFRKQVEKSSTVSEPFTAPKQLLTLPP-------SIKTGALPTLDQLGVE-APKFDDRAVLKFPGGETAGLTRLQAYIWDADCLKLYKQTRNGMLGANYSSKFSAWLALGCLSPRRVYQAVQAYEHERVRNDSTYWLMFELLWRDYFRLICLKHGDRVFYPSGLR-DLK-VAWQQDWPRFEAWCTGQTGYPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIDWRMGAEWFESLLVDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQSKDYDPQGEYVKHWLPELQTLP-----ASKVHCPWQLSGLEQQQFSLRLGVDYPHPIVDLQKS 471          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A061GIG4_THECC (Cryptochrome DASH n=5 Tax=Malvaceae TaxID=3629 RepID=A0A061GIG4_THECC)

HSP 1 Score: 444 bits (1142), Expect = 1.520e-147
Identity = 222/459 (48.37%), Postives = 297/459 (64.71%), Query Frame = 1
Query:    7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVA-------------VKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKF 1344
            G  +  A R +F++E +ADL+  L  +G DL+++ G PED++P LA   G      T+Y H + CS+E+ V+  V R L  +   P               ++ IWG+TM+HLDDLP     +LP+++TQFRK+VE +C IR  +  P +L P PS  D         VP+++QLG +       M    F GGETA L RV +Y W++D L+ YKETRNG+LG  +S+KFSPWLA G LSP+ I  E+++YE+ER+ANDSTYW++FEL+WRD+F + ++K GNSIFHLGGPR     + W  +    E+W+ G TGYP IDANM+EL A+GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQA+TYDPEGEY+ +WLPEL ALP                   R   N P + Y + +VPLKF
Sbjct:  132 GFPKTGALRAQFIIECLADLKKNLMKKGLDLLIQRGKPEDILPSLAKAFGAH----TVYAHKETCSEELQVERLVTRGLRGVVLSPAQGNSTSSSSTHNPKLELIWGSTMYHLDDLPISIS-SLPDVYTQFRKSVEAKCAIRGCIRLPKSLGPAPSIDDWG------HVPSIEQLGLQSEKATKGMR---FLGGETAALSRVSEYFWKKDSLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIYEEVKRYEKERLANDSTYWVLFELIWRDYFRFLSIKYGNSIFHLGGPRK--AERGWSQEQKLFESWRNGCTGYPLIDANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPELLALP-------------------RDKRNFPGKSYIEQVVPLKF 555          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: UPI00053C1400 (cryptochrome DASH, chloroplastic/mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1400)

HSP 1 Score: 443 bits (1140), Expect = 1.610e-147
Identity = 221/442 (50.00%), Postives = 294/442 (66.52%), Query Frame = 1
Query:   25 ASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPP---VAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLK 1341
            A R  FL+E + DL+  L  +G +L++R G PED+IP LA   G      T++ H + CS+E+ V+  +++AL   +G P     ++ IWGNTM+H+DDLPF     LP+++TQFRK+VE +C +R+    P +L P PS  +        +VP L QL  +P   +  M    F GGETA L RV +Y W +D L+ YKETRNG+LG  +S+KFSPWLALGC+SP+ I  E+++YERERIAN+STYW++FEL+WRD+F + ++K GNS+FHLGGPR+   R  W  D    EAW+ G+TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQA+TYDPEGEY+  WLP+L  LP                   +   N P   Y D +VPLK
Sbjct:  124 ALRAAFLMECLDDLKKNLIKRGLNLLIRNGKPEDIIPSLAKDFGAH----TVFAHKETCSEELRVERLMQKALREASGRPENGAKLQLIWGNTMYHIDDLPFAAVD-LPDVYTQFRKSVEAKCSVRSCTRVPFSLGPTPSVDNWG------DVPILGQLDIQPQEVRKGMR---FVGGETAALGRVFEYFWNKDLLKVYKETRNGMLGPDYSTKFSPWLALGCISPRLIYEEVKRYERERIANNSTYWVLFELIWRDYFKFLSIKYGNSLFHLGGPRNVQGR--WSQDKKLFEAWRDGKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAWWLPQLRRLP-------------------KEKRNSPGMSYIDRVVPLK 530          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPZ3_ECTSI7.960e-24173.04Cryptochrome DASH n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D7FPZ4_ECTSI1.840e-22466.95Cryptochrome DASH n=1 Tax=Ectocarpus siliculosus T... [more]
A9U403_PHYPA1.970e-15550.33Cryptochrome DASH n=2 Tax=Physcomitrium patens Tax... [more]
A0A6I9RMC3_ELAGV2.850e-15250.77Cryptochrome DASH n=2 Tax=Arecaceae TaxID=4710 Rep... [more]
W7TQV2_9STRA2.760e-15149.78Cryptochrome DASH n=1 Tax=Nannochloropsis gaditana... [more]
A0A6I9RLI6_ELAGV1.430e-14950.55Cryptochrome DASH n=3 Tax=Elaeis guineensis var. t... [more]
UPI0019E3F8931.680e-14950.45DASH family cryptochrome n=1 Tax=Synechococcales c... [more]
A0A6I5PL83_9CYAN1.980e-14853.06Cryptochrome DASH n=1 Tax=Leptolyngbya sp. SIOISBB... [more]
A0A061GIG4_THECC1.520e-14748.37Cryptochrome DASH n=5 Tax=Malvaceae TaxID=3629 Rep... [more]
UPI00053C14001.610e-14750.00cryptochrome DASH, chloroplastic/mitochondrial n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15370contigH-elongata_contig15370:287..6655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score678.7
Seed ortholog evalue2.1e-192
Seed eggNOG ortholog2880.D7FPZ3
Preferred nameCRY3
KEGG koko:K01669
GOsGO:0000166,GO:0000719,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003904,GO:0003913,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363
EggNOG free text desc.DNA photolyase activity
EggNOG OGsCOG0415@1,KOG0133@2759
EC4.1.99.3
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons6
Model size1551
Cds size1533
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929908.7471728-CDS-H-elongata_contig15370:286..5801622929908.7471728-CDS-H-elongata_contig15370:286..580Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 287..580 -
1691679204.1479316-CDS-H-elongata_contig15370:286..5801691679204.1479316-CDS-H-elongata_contig15370:286..580Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 287..580 -
1622929908.7692697-CDS-H-elongata_contig15370:843..9511622929908.7692697-CDS-H-elongata_contig15370:843..951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 844..951 -
1691679204.1609266-CDS-H-elongata_contig15370:843..9511691679204.1609266-CDS-H-elongata_contig15370:843..951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 844..951 -
1622929908.7839112-CDS-H-elongata_contig15370:4509..46811622929908.7839112-CDS-H-elongata_contig15370:4509..4681Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 4510..4681 -
1691679204.1791818-CDS-H-elongata_contig15370:4509..46811691679204.1791818-CDS-H-elongata_contig15370:4509..4681Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 4510..4681 -
1622929908.7961495-CDS-H-elongata_contig15370:5077..53431622929908.7961495-CDS-H-elongata_contig15370:5077..5343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 5078..5343 -
1691679204.1913073-CDS-H-elongata_contig15370:5077..53431691679204.1913073-CDS-H-elongata_contig15370:5077..5343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 5078..5343 -
1622929908.8107378-CDS-H-elongata_contig15370:5614..59681622929908.8107378-CDS-H-elongata_contig15370:5614..5968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 5615..5968 -
1691679204.2047005-CDS-H-elongata_contig15370:5614..59681691679204.2047005-CDS-H-elongata_contig15370:5614..5968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 5615..5968 -
1622929908.8214326-CDS-H-elongata_contig15370:6298..66371622929908.8214326-CDS-H-elongata_contig15370:6298..6637Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 6299..6637 -
1691679204.2191062-CDS-H-elongata_contig15370:6298..66371691679204.2191062-CDS-H-elongata_contig15370:6298..6637Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15370 6299..6637 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929908.8343923-UTR-H-elongata_contig15370:6637..66551622929908.8343923-UTR-H-elongata_contig15370:6637..6655Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15370 6638..6655 -
1691679204.231273-UTR-H-elongata_contig15370:6637..66551691679204.231273-UTR-H-elongata_contig15370:6637..6655Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15370 6638..6655 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15370.3543.1prot_H-elongata_contig15370.3543.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15370 287..6637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15370.3543.1

>prot_H-elongata_contig15370.3543.1 ID=prot_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=511bp
MSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQAT
GTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLP
FDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIIT
EVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKE
TRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIF
ELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETG
YPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLD
HDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELA
ALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKGGK
GGGGGQRARGASGGRSSSRGSRGGGSGGGKGSRGGKGDSQSSEGTMRKFK
ASRLQRDGSL*
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mRNA from alignment at H-elongata_contig15370:287..6655-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15370.3543.1 ID=mRNA_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6369bp|location=Sequence derived from alignment at H-elongata_contig15370:287..6655- (Himanthalia elongata Himel1 dioecious)
AGGCGTGGAACGAACCGAATGTCGGCTTCGCGATGCCGCTTTCTCTTGGA GAGCGTCGCCGATCTTCAATCCCGCCTAAGAGTCCAAGGATCGGATCTCA TCGTGCGCTGCGGATACCCCGAGGATGTCATCCCCGATCTCGCAACGAAG CTAGGCGGCCAAGCGACGGGTACCACTCTCTATACCCACACAGATGTTTG CTCCGATGAGATATGCGTGGACAATGCGGTGAAAAGAGCTCTGACGGCCT TGACGGGCCCTCCAGTTGCGGTGAAGGAGATTTGGGGGAACACGATGCAT CATCTCGACGACCTGCCATTCGATTTCCCTCACGCGCTCCCCAACATTTT TACACAGGTGCGATTTTGATTGACTGACAGATATGCGCTGTATATACCCG TGACGTTGGCCATGGTTTTTCGTGCACGCGTGTAGCCGGTACTCTTAAAT GGACCTTGTATGCTCAAGGCTTCGGTTAAATCGCAGAACAACTTCTTGCT CCGTCGTTAAACGAAAGGATTACGAGCAAAACCATATATGTTTCCCATCT TATAACGTTTATGGGCTTCGATTCAGGAAATGTTATGATTCGGGTTATTC CTTCGTAACAAATTCCGAGCAACACCCGAAACACGCTGCCGAACGTTCTT GCCCGTTTGCCGCGGTATTTCGCGCGCCTGACCGCAGTTCCGCAAGGCAG TGGAGCAGAGGTGTCAGATACGAACTCCGGTGTCCGCTCCTGGCACACTC CGCCCATTTCCGTCTTGTGGAGACGGCAATGCCGCTTCGATTATTACCGA GGTGCCAACCCTCAAGCAATTAGGGTTCGAACCAGCTCCCGAAAAGGACG AGATGGCAGTGCTGCTCTTCAAGGGGGGCGAAACGGCTGGCCTGAAGCGT GTGCGGCAGTACATTTGGGAGGAGGATCGCCTGCGTAGCTACAAGGAGAC GCGGAATGGCTTGCTTGGGAGCGGGTTTTCATCCAAATTCTCGCCGTGGC TTGCGCTCGGTTGCCTCTCGCCGAAGACAATCGTCAGCGAGGTACTTCTA GTTCCTGGTATTGGGCTACTGAGTTATCATAGTTAACCCTTTTAGCGCAA TAAACACCTGTCTTAAAATGGCGCATAGGAAAATACCACCCGATCTCACG ACCGCGAATGAACCGCAGTGTTCTCTGGCGACAGCCCGATCATATCGTCA GGACTTGGTAGCGCGTTTTTCCTTCCCTTGTAAGAAATTTTCGTGGTGCG CAGCCTCGCACGCTTGGTTTGACATTTTGACATTTGGTGCTCTTCTCTAT CCAACAATGCAGATCAGAAAGTACGAGAGGGAACGAATCGCGAACGACTC CACCTATTGGCTGATCTTTGAGCTCTTATGGCGGGACTTCTTCTGCTACA GTGCGGTCAAGAACGGGAATTCCATCTTTCACTTGGGAGGGCCACGACAC GATGCGAAACGACAGGTCTGGAGAGATGATGCCGGTTCTCTGGAGGCGTG GAAGACGGGAGAGACGGGCTACCCATTTATCGACGCCAACATGCGAGAGC TCAAGGCTTCCGGGTTCATGTCCAACAGGTATGGCTAGGTTGGTGGGTAC AGCGTTTCTACAAGGCAAACGGTGAACGAGGCTGTTTGGACCTGTGGGAG TAGCTTTGATTATCCCTGCCCCAAACGCACCAGCGGCACGGAAGCCTCGC TTACTGCACTATTATAGTGTACTTAAATCGATCCCGCGGGGTGCGTTTGC GCGGGGAATACGTGTCACGCTTCTACCTGAGGGAATCCGGGAAATGACAT GGTTCGGTGTTGTCTCAAGTCGAACTCCAGCAAGAGCAGGTTCCTAAAAA AAATGAGATACTTTTTCTCGACGCGGCCTTCTTTTGCGCGTGTTGAATAA AGTGCTTCGATTTGCGAGCGATTCTGACGCGTAGCCCCAACTGCTCTCCC CCATTCCGGTGCAATATCTGGTAGAGGGCGACAGGTGGTTGCGAGCTTCT TCACCAAGGACCTCGGGATGGATTGGCGGCTGGGGGCGGAACACTTCGAG GAGCACCTCTTGGATCACGACCCGGCGTCAAATTGGGGCAACTGGAATTA CGTCGCGGGCGTCGGCAGTGATCCTCGGGAGGACCGGTACTTTAATGTGA GAGATGCGGGATGCATGCGCGAACATTTATGTTGGGCGTGCTTTTATGAT TTGTGGGCGAGGTGTACCACCTTGCGCCGCCATCGCTCCACCTGGTTGCG AAGGCTTCCGTTGCTGCCATTACCATGTGGTGGCGCGTAAGCTTGTAATC GGTTCATGCCCCCGCCAGTGGCCGATTCCACACAAACAGGACCGAGACAC AGACGAGTCAAATATTTGGCTGTTAGCAGGCTTGACCTTAACGGTACCAC TCGAGCAAGCCACCTGTTTGTCATCGATTTGTGCAAAGTCGTAGATGTAC CTGGGATTGGATTAATTGTAGGGAATACTTGACACATTTAGCTTCTGGCC CTGGTCCAGTCCCGCTTGTGGTCAGCAGTCAGCAGCTGAGCATATATAGA TGGAAAAGACACAAACAAAAGACTACCTTAATTACTTTGCAGAGAGAAAC GAATAAAACACAAGGAAAAGGTAGCTAAGACAAAGGAAACAAACAAACGA CTGGAAAAAATGGGAAAAGTATGTTTGACTCCACGCCAATCACCCATCCC ACTAATAATCCTAAGACGTGCTCAACGGTTTGGAGGGAGTAAAAAAATAT TATTTTGCATACACCATCACGATGGCAGCTCCTGACCCATCGTCCTCCTT GGCTCATCCCTGTGTCTGTGGCATTTGTTTGGGAGGTGGCAGGCGTATCC CGAAACTACCACCAACAAGTACCGGCCTAAACCACTGTTCCCTACCGTGG TCTTCGCAACCATGATTTTTGACGTCTCGCGTTCCTCTGCGCGCTCGAGT CTTTGGTGGGTCACAGTATTCTCCTTTTTCCTCTGCTTCATGAACACAGT GATCCCCTCGTTGGAGGTAGCCAGCCACTCAGTCATGTCCTGCACCCTCG TGATCCAATTTCCCTGGATTTTGAAGGCCTTGAGGTCCTCTGGCCGACAT GTTCACCAACTCTTTTCGCGACCACTACAGTGCACCCATCCCCTTCGAGT TTGCCAATCATCGTCCTTCTTAGCAGCCTCGCTTGGAAGCGCGCGCCACC CGCCCGCCCGCCCACAGCAGTCTCTTCGCTCGGACACTCGCCTCAACAAT GCCGCATTCTGTTCTCTCGAGCGCGCTACGGTAGGACAGAAAGTGATCGG TTCTGCATTTCCGGCGAAAGCTGATGATAGGTAGAAGTCAGTGGTGGACC GTACTGAGCTTGTTGTTATGATCTCTGGAAAGTGACCAAGTCGCGCGCAT TCTTACAGGAAAGTCTCCAGCACTTTCGTTTCAAGCAGCCGTACCTTGAA CTCGAGTTTGGCTTGCGTTCGGTGTTACATCTCTCTGCTGTACCGCTTCA ACTGGAGCCATGCCAGACATGCGCGCCGATTGATCTCAGCGGCAATTTCC TGGCACTCGGTGATAATTTCTTCAAGGTACGCGAACGCCGAGTTCTGCGC GTATTCCGGCGGCTGTGAAGATGATCTTACATGTATGTATGGGATGCCGT TATGCGTATAGCCTCACTCTTCGTTTTCGAAACCGCCAGCGTATTAGCAT TGAACACCTCATCACCACCATTATTGCGAGGCCTTGTGTGATACGCGAGG TAATTTACACGTCGTCGGTATAGAGCATGCCCCAAACAGCTCGAGAAACC TTTTGCATCGCCGTCTCGGGTCCCACGGCATCCCTCGGCTCCTACAGATG TACCAATCTGTCCAAAATCTCCCGGTCTTTACTGAAGCGTCTCAGAATGA CAATCAGCACGACAGCAACGGTGTTGAAGAGCAGCGGGGAAAACTCTTAG CCCTGACGTAACCCCTTTTTCACGCAAACAAATCTGAGCATATATCACCA AACGTACGCAACCCATCATGCCGTCGTGAAACTTCCGGATGACCGTGATC GTCATTGGCGGCATTTCAAATTGAGCCAGTACCTCTCATTGAAGCACATG ATCGATGGAGCTGTATGTTTTCTGAAGGCCGATGAGGCCAAGGTACACTT GTACTCCACGCTTCCATCCAAGGGTACGCATAACATGATGTTTATGGCGG ACATCCTGGGGCCGTACCCGCATTGCTCGTCAATCATTCTTACCTCGACC TCACAGTCGTTAGCAAGACGTTATGATTTCACCTTGATAATACATCTTCC CGCATGAGCAACAAGAGTAACTCCCCGATAGCTGATGCAGTCCTTCGTTT TTTTTCTCGTGTATCACCTTGAGGGTCCTATCTCTCCACTCCTGCGGCAT CGGCTCTCCATGGTAGATCCGCGTACTAATCTGATGGAAGTTGGTCAAAA TGACAGGTTCCAGGCGGAGCCCCAGTCGTAAGGAGGTCGATTGGCACATC GTTTGGACCAGCTGCGTTGCCGTTCGCCAGCGACTGAACCGCGGCTTACA CTTCGGCCATCGTCGGCTCATCCACTAGGGATGGAGCCGTTGGACGCTGC ATGAGGCCGTGGCTCACTTCAGATCGAAGATTGTCTGACTTGGCGTAGAG CAGCGTGCTATACTATTGCACCCACTGCGCTAGGATATGCCCCCTTTCTC GCCGCAACTGGACTTCTTTCCCCTCGATATATGGCGATTAGACCCCCCTT CTATCCTCCAGTGCTAAAGACTTCCGGTGCGCGTTGACCCCCTCTAATCG CCATGCATCATGTTCTCCTTAAACCATTTCACCCGAGCTGGGAGGAATAT CCGCACACCCTCGGCCCGCACCTGCTTGAAGTTGTTGCATGCAGCCCTGA CTTGCCTCTGGAGTTGTTAGTCCTTGTTATTCCAACTAAGGCTTTCCATG CTGTTACTCTTTCCTCCAATGACTTCTGGGCCTCCGCGTTTGTCTGGGCA TTGGGATGTTTTAAGTACCCCCCCCTGTCGGCGCTAAAATATTCTACTAA CGTGGCTTGGGGGAGTTCATGCTGGATGTTCCGCGAGCTCAAAGACCTCG GGGGAAACTTTTGTCTCTCTCCAAAGGGATGAAGCGCATCACACTCGATA TGATTTCTGCCGAACAACGGATTGTTGGAAATCCTTATAACAACCATAGA CTTACGAGAGTACCCAGCCAGGACTATACATGAGCAGTTTCGGTGTCTTG ATTGTATCGTACATTCTGGTATACCGTTGTACACGGGGTGTGAGTGCGGC GCTTATGCGTTGGCCCAGACTTTGTGCAGATATAAAAGGTACCTATGCTG TAATTAACGCATGGTCACGCTATACTCATTCGTTCGCGCACATATTTAAG CCTTTTTGCGGTACTTGGAGTATAGTCACGCTGTGGGATGTGCAACATCT TATTATCAGTTATCCAGTCTAATTAAATGGCCCATGGTACGATCGCTTTG GCGTAGCAAACGCAAGCATGACGGCCAAAAGTTATTACCATTCTTACGAA ACGCAGCCTGGACGGAGGAAAGCCGGCATCACCCCGGCATAGTTCGGATA CCTGATATATACCCGTTAGGGTACGAAGTGCATTTAAAATCAGCATACCC CTCCCCTCCCGTCCACGTTTTACTCTGCGTGCGCTCCTGTTATCTTAAAA ACAGATAGAGAAACAGGCCAAGACTTACGACCCAGAGGGCGAGTACATCC GTCACTGGTTGCCAGAACTGGCTGCGCTACCAACGACAGCTTTGCAGGCA AGACGCATATTGGTTCGAGCTTACTAGCGTGCTCATCGCTTTCGACCATT CTCCGTCCATTCTCACAAACGTGGGTGGGTGGTCTGGACTGTTACATGTT TTAGAGGCATGTAATACACGCATACGGAACTTGTGCGAAATATGATGCAT TTTGAAACGAGGTTTCATTTTATGTCGTACCTAAACCTGTCGCGTTTGAT GACGTCATTTGCCTTCGCGATTTCTTTGCTCTCTCGCCGCCACCAATCAT TTCCTCGTACTGCACCGCACCACAGTCACCTGGCGGGATCACGACGATGC TGAGGCATCTTCATAATTTACCAGTGAGAATATACCCGGACCCCATTGTC CCACTAAAGTTTTCGACCCCGTGGAAAGGGGGAAAAGGGGGTGGCGGAGG GCAACGGGCTCGGGGGGCGAGCGGTGGTAGGAGTAGTTCGAGGGGTAGCC GTGGCGGAGGGAGTGGGGGCGGCAAGGGGAGTAGGGGTGGCAAAGGGGAC AGTCAAAGCTCAGAAGGTACAATGAGGAAGTTCAAGGCGTCGCGTCTTCA GCGCGACGGTAGTCTTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig15370:287..6655-

>mRNA_H-elongata_contig15370.3543.1 ID=mRNA_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3066bp|location=Sequence derived from alignment at H-elongata_contig15370:287..6655- (Himanthalia elongata Himel1 dioecious)
ATGTCGGCTTCGCGATGCCGCTTTCTCTTGGAGAGCGTCGCCGATCTTCA
ATCCCGCCTAAGAGTCCAAGGATCGGATCTCATCGTGCGCTGCGGATACC
CCGAGGATGTCATCCCCGATCTCGCAACGAAGCTAGGCGGCCAAGCGACG
GGTACCACTCTCTATACCCACACAGATGTTTGCTCCGATGAGATATGCGT
GGACAATGCGGTGAAAAGAGCTCTGACGGCCTTGACGGGCCCTCCAGTTG
CGGTGAAGGAGATTTGGGGGAACACGATGCATCATCTCGACGACCTGCCA
TTCGATTTCCCTCACGCGCTCCCCAACATTTTTACACAGATGTCGGCTTC
GCGATGCCGCTTTCTCTTGGAGAGCGTCGCCGATCTTCAATCCCGCCTAA
GAGTCCAAGGATCGGATCTCATCGTGCGCTGCGGATACCCCGAGGATGTC
ATCCCCGATCTCGCAACGAAGCTAGGCGGCCAAGCGACGGGTACCACTCT
CTATACCCACACAGATGTTTGCTCCGATGAGATATGCGTGGACAATGCGG
TGAAAAGAGCTCTGACGGCCTTGACGGGCCCTCCAGTTGCGGTGAAGGAG
ATTTGGGGGAACACGATGCATCATCTCGACGACCTGCCATTCGATTTCCC
TCACGCGCTCCCCAACATTTTTACACAGTTCCGCAAGGCAGTGGAGCAGA
GGTGTCAGATACGAACTCCGGTGTCCGCTCCTGGCACACTCCGCCCATTT
CCGTCTTGTGGAGACGGCAATGCCGCTTCGATTATTACCGAGGTGCCAAC
CCTCAAGCAATTAGGGTTCGAACCAGCTCCCGAAAAGGACGAGATGGCAG
TGCTGCTCTTCAAGGGGGGCGAAACGGCTGGCCTGAAGCGTGTGCGGCAG
TACATTTGGGAGGAGGATCGCCTGCGTAGCTACAAGGAGACGCGGAATGG
CTTGCTTGGGAGCGGGTTTTCATCCAAATTCTCGCCGTGGCTTGCGCTCG
GTTGCCTCTCGCCGAAGACAATCGTCAGCGAGTTCCGCAAGGCAGTGGAG
CAGAGGTGTCAGATACGAACTCCGGTGTCCGCTCCTGGCACACTCCGCCC
ATTTCCGTCTTGTGGAGACGGCAATGCCGCTTCGATTATTACCGAGGTGC
CAACCCTCAAGCAATTAGGGTTCGAACCAGCTCCCGAAAAGGACGAGATG
GCAGTGCTGCTCTTCAAGGGGGGCGAAACGGCTGGCCTGAAGCGTGTGCG
GCAGTACATTTGGGAGGAGGATCGCCTGCGTAGCTACAAGGAGACGCGGA
ATGGCTTGCTTGGGAGCGGGTTTTCATCCAAATTCTCGCCGTGGCTTGCG
CTCGGTTGCCTCTCGCCGAAGACAATCGTCAGCGAGATCAGAAAGTACGA
GAGGGAACGAATCGCGAACGACTCCACCTATTGGCTGATCTTTGAGCTCT
TATGGCGGGACTTCTTCTGCTACAGTGCGGTCAAGAACGGGAATTCCATC
TTTCACTTGGGAGGGCCACGACACGATGCGAAACGACAGGTCTGGAGAGA
TGATGCCGGTTCTCTGGAGGCGTGGAAGACGGGAGAGACGGGCTACCCAT
TTATCGACGCCAACATGCGAGAGCTCAAGGCTTCCGGGTTCATGTCCAAC
AGATCAGAAAGTACGAGAGGGAACGAATCGCGAACGACTCCACCTATTGG
CTGATCTTTGAGCTCTTATGGCGGGACTTCTTCTGCTACAGTGCGGTCAA
GAACGGGAATTCCATCTTTCACTTGGGAGGGCCACGACACGATGCGAAAC
GACAGGTCTGGAGAGATGATGCCGGTTCTCTGGAGGCGTGGAAGACGGGA
GAGACGGGCTACCCATTTATCGACGCCAACATGCGAGAGCTCAAGGCTTC
CGGGTTCATGTCCAACAGAGGGCGACAGGTGGTTGCGAGCTTCTTCACCA
AGGACCTCGGGATGGATTGGCGGCTGGGGGCGGAACACTTCGAGGAGCAC
CTCTTGGATCACGACCCGGCGTCAAATTGGGGCAACTGGAATTACGTCGC
GGGCGTCGGCAGTGATCCTCGGGAGGACCGGTACTTTAATAGGGCGACAG
GTGGTTGCGAGCTTCTTCACCAAGGACCTCGGGATGGATTGGCGGCTGGG
GGCGGAACACTTCGAGGAGCACCTCTTGGATCACGACCCGGCGTCAAATT
GGGGCAACTGGAATTACGTCGCGGGCGTCGGCAGTGATCCTCGGGAGGAC
CGGTACTTTAATATAGAGAAACAGGCCAAGACTTACGACCCAGAGGGCGA
GTACATCCGTCACTGGTTGCCAGAACTGGCTGCGCTACCAACGACAGCTT
TGCAGGCAAGACGCATATTGATAGAGAAACAGGCCAAGACTTACGACCCA
GAGGGCGAGTACATCCGTCACTGGTTGCCAGAACTGGCTGCGCTACCAAC
GACAGCTTTGCAGGCAAGACGCATATTGTCACCTGGCGGGATCACGACGA
TGCTGAGGCATCTTCATAATTTACCAGTGAGAATATACCCGGACCCCATT
GTCCCACTAAAGTTTTCGACCCCGTGGAAAGGGGGAAAAGGGGGTGGCGG
AGGGCAACGGGCTCGGGGGGCGAGCGGTGGTAGGAGTAGTTCGAGGGGTA
GCCGTGGCGGAGGGAGTGGGGGCGGCAAGGGGAGTAGGGGTGGCAAAGGG
GACAGTCAAAGCTCAGAAGGTACAATGAGGAAGTTCAAGGCGTCGCGTCT
TCAGCGCGACGGTAGTCTTTAGTCACCTGGCGGGATCACGACGATGCTGA
GGCATCTTCATAATTTACCAGTGAGAATATACCCGGACCCCATTGTCCCA
CTAAAGTTTTCGACCCCGTGGAAAGGGGGAAAAGGGGGTGGCGGAGGGCA
ACGGGCTCGGGGGGCGAGCGGTGGTAGGAGTAGTTCGAGGGGTAGCCGTG
GCGGAGGGAGTGGGGGCGGCAAGGGGAGTAGGGGTGGCAAAGGGGACAGT
CAAAGCTCAGAAGGTACAATGAGGAAGTTCAAGGCGTCGCGTCTTCAGCG
CGACGGTAGTCTTTAG
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