mRNA_H-elongata_contig15275.3486.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15275.3486.1
Unique NamemRNA_H-elongata_contig15275.3486.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI)

HSP 1 Score: 726 bits (1874), Expect = 1.770e-254
Identity = 344/614 (56.03%), Postives = 432/614 (70.36%), Query Frame = 1
Query:   13 TQEPLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVR---AGDS-----SGDTVLVSAMGASTAAILTKLDENVITLEEVG-EEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLGV-GNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAWGDTSSNVKS 1824
            + + L FTALN Y VRDGKPG DYPWLKDFK++EPHRET L V  PR+GF YRW+VR    GDS      G++  + A GA    +LT L+EN+ITLEEV   +GKV RRL+ETVMVKYVRREIRSLT+++R +LLDAM  +W+ RV+GGNGKE YGDGY+DI+AINRLH KAAT   CDHFHDGLGF+VSH++ +NTFE+SLQ +NPKLT+PYWDFTIE+S+S E  YDP  P T++ +L  S FG+ D  D +VKDGRWA +++      NPG L  DVYG LR+PW TNDR Y++RG+GQ+C +N D+ L WPTCQ HY++ TG+ TFY W W+S+  PH P+H W+GG +DC  TY+ IG+LVG +I+  L  L                              L +   CGC GYDL QG DYK +ME +E+LE  IG FD+ TQR+VV+ +C GV+NFG H QSSSS DP FWP+HPTM+RL+ + VLT SI DF W D D ++T   G  +SE+TS Y + C GH G DVFP+ LLD D D FEV TGIRG  + GN LTNRE+LAA DPR NS++Y+YD F+W HCE DG  F+DAW DT  + ++
Sbjct:  108 SDQALAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVRPTCTGDSCTSSSGGESSPIQAAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDEREELLDAMFTIWDVRVDGGNGKELYGDGYADIYAINRLHHKAATHGTCDHFHDGLGFLVSHSVLTNTFEYSLQAVNPKLTVPYWDFTIETSTSTETVYDPASPYTRTPLLDASWFGTADLDDGMVKDGRWAKSEIPKVRDNNPGGLEPDVYGKLRAPWNTNDRAYLTRGLGQLCQLNTDQLLAWPTCQTHYELTTGFHTFYDWVWDSMKAPHAPLHLWLGGTMDCAGTYEAIGELVGNSIAETLTLL------------------------------LLSSGQCGCHGYDLTQGSDYKIVMESMEYLEDLIGDFDDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTFADGTTVSEITSVYSDHCIGHHGSDVFPYYLLDTDTDGFEVKTGIRGQPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFNDAWDDTEPSSRT 691          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI)

HSP 1 Score: 709 bits (1830), Expect = 6.330e-247
Identity = 346/638 (54.23%), Postives = 428/638 (67.08%), Query Frame = 1
Query:   22 PLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAG--------------DSSGDT--VLVSAMGASTAAILTKLDENVITLEEVGEE-GKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSS--SAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIR-GLGVGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAWGDTSSNVKSADHR-FFERTAPLSGMY 1872
            PL FTALN Y VRDGKP  DYPWLKD K+IEPHRET L V  PRDGF YRW+V  G              +  G T  V+ +A GA    + T L EN ++LEEV  + G V+RRL E VMVKYVRREIR+LT+++R +L DAM  LWE RV+GGNGKE YG+ Y+DI+AINRLH+KAA+   CDHFHDGLGF+ SH++ SNTFE SLQ +NPKLTLPYWDFTIES+     E T D   P T+S + +P  FG+ D  D++VKDGRWA+T++      NPG ++TDVYG LR+PW  NDR Y++RGMG++C  + ++  PWPTC  HYD+ TGY  FYSW W SL  PHGPVH W+GG +DC  TY+RI  LVG   + +L   +  HRK LY D I++CDG  D +    +V LS    CGCLGY+L +G DY+ +   +  ++  IG +D +T+R+VV+ IC   L  G+H Q+SSSLDPSFW  HPTM+RLW Y VLT  ITD+ WPD DV+ T P G V++E  S Y E CFGH G DVFPFGLLD D D FE+ TGI      GN LTNRE L AFDPR N++ Y+YDTF W HC  DG  F DAW  ++   KS   R  FE   P + MY
Sbjct:  132 PLSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFALWEVRVDGGNGKELYGEDYADIYAINRLHYKAASQSSCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGLEGTVDDGGPLTRSPLFRPDWFGTFDPEDNMVKDGRWAFTEIPRVFENNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMEKAFPWPTCTSHYDLATGYSDFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVMLSR---CGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQSSTKKSKSTSARPAFEDGVPRAPMY 766          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI)

HSP 1 Score: 705 bits (1820), Expect = 3.530e-245
Identity = 340/618 (55.02%), Postives = 423/618 (68.45%), Query Frame = 1
Query:   25 LYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLGVGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAW-GDTSSNVKSADHR-FFERTAPLSGMY 1872
            L F A N YQ+RDGKP  DYPWLKD K+IEPHRET  TV++PRDGF YRW V AG ++   +   A G  +  +LT LDEN + LEEV  +G V RR  E VMVKYVRREIR+LT+++R +L DAM  LW  RV+GGNGKE YGD Y+DI+AINRLH+K A+   CDHFHDGLGF+ +H + +NTFE SLQ +NPKLTLPYWDFTIESS++           TKS + Q S FG+ D  D  VKDGRWAYT++      +PG +  DVY  LR+PW  NDRPY++RGMG+MC+   DE+ PWPTC+ HYD+ TGY  FYSW W SL  PHGPVH WIGG +DC  T+  I +LVGP+I+ +L   +  HRK L+ D I+ C G+      P +V  S    CGC GYDL QG DY+ +   +  L+  IG FD + +R+VV  +C   +N G+H Q+SSSLDPSF+  HPTM+RLW Y+VLT  ITDF WPD+DV+IT P G V  E  S Y E C GH G DVFPFG+LD D D FEV TG++G+  GN LTNRE+L AFD R NS++Y+YDTFKW HCE DG  F+DAW G   +   S+  R  F++ AP + MY
Sbjct:  166 LSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAGSAAEGELCTEATGPESTVVLTTLDENEVVLEEVDADGTVVRRRQEKVMVKYVRREIRTLTDDEREELFDAMFTLWSVRVDGGNGKELYGDDYADIFAINRLHYKGASPYECDHFHDGLGFLTNHIVITNTFEASLQTVNPKLTLPYWDFTIESSTAGTKGDGGYQSQTKSELFQESWFGTADPTDGQVKDGRWAYTEIPKMKVNDPGAVEPDVYSKLRAPWNVNDRPYLTRGMGKMCDAKVDEWYPWPTCETHYDLATGYSDFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQ--CGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAWNGAAQARPTSSSRRPSFKQGAPRAPMY 781          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE)

HSP 1 Score: 701 bits (1809), Expect = 5.960e-244
Identity = 340/605 (56.20%), Postives = 416/605 (68.76%), Query Frame = 1
Query:   22 PLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEE-GKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPS-TKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGL-GVGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAWGDTSSNVKSA 1827
            PL F A N Y +RDGKP +DYPWLK+ K+IEPHRET  TV++PRDGF YRW VR  D+  D +   A GA T  ILT LD+ +I LEEV  E G V+RRL+E VMVKYVRRE+R+LT+E+R +L DAM+ LW  RV+GGNGKE YGD Y+DI+AINRLH+KAA+   CDHFHDGLGFM +H + +NTFE+SLQ +NPKLT+PYWDFTI+ SS+     +    + T S V  P  FG+ D  D+++KD RWA+T +      NPG L  DVY  LR+PW  NDR Y++RGMG MC I      PWPTC+ HYD+ T Y  FYS+ W+SL  PHGPVH WIGG +DC  TY  I +LVG   + EL   +  HRK LY + I++C G      KP ++ LS  + CGCLGYDL QG DY+ + ++L   +  IG  D+  +REV   ICG   N G+H Q+SSSLDPSFWP HPTM+RLW YS+LT  ITDF WPD DV++T P G V  E  S Y + C GHRG DVFPFGLLD D DDF + TGIRG    GN LTNREVL AFD R NS+ Y+YDTFKW HCE DGV FDDAW +  +   S+
Sbjct:  128 PLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVRGADADKDDLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEEREELFDAMYTLWTVRVKGGNGKELYGDDYADIYAINRLHYKAASPQDCDHFHDGLGFMTNHAVITNTFEYSLQRVNPKLTVPYWDFTIDGSSAGGIFGESVSSAETYSKVFTPEWFGTYDEDDNMLKDSRWAFTPIPRMEVNNPGELTPDVYLKLRAPWNVNDRAYLTRGMGNMCGIPTSNTYPWPTCETHYDLATSYKDFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGELAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEI-LSTGQ-CGCLGYDLTQGTDYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWENAKARGPSS 730          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE)

HSP 1 Score: 684 bits (1765), Expect = 2.810e-237
Identity = 336/609 (55.17%), Postives = 419/609 (68.80%), Query Frame = 1
Query:    1 LAESTQEPLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTK--LDENVITLEEVG-EEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSA----EPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYK-RIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRG--LGVGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAW 1797
            LA +   PL F A N Y VRDGKP  DYPWL+D K++EPHRET L+V +PR+GF YRW +R G SS   V  +A GA    +L    L+EN++TLEEV    G V+RRLDE VMVKYVRREIR+LT E+R +LLDAM ELW  RV+ G+G+EKYG+ YSDIWAINRLHFKAA+  +CDHFHDGLGF+ +H L SNTFE+SLQ +NPKLTLPYWDFTIESS++     E   D      K+ +LQ S FG+ D    +V++GRWA   +     GNP  +  DVY  LRSPW  NDR YISRGMGQMC+   + + PWPTC+ HY++ T +  FYSW W SL  PHGPVH WIGG +DC  TY   I  LVG   +++L  +A  HRK ++ D I+ C+G+V  +  P +V  S   +CGC GYDL QG DY  + E + F++  +G  DENT+RE+V+ +C   +N G+H QSSSSLDPSFW  HPTM+RLW YSVLT  +TDF WPD DV+ T   G   S+  S Y E+C GHRG DVFPF +L  + +DF V TGI+G  LG GN +TNREVLAAFDPR N++ Y+YDTF+W HC +DG    DAW
Sbjct:   98 LATTAPPPLAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIRGG-SSASKVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLTYEEREELLDAMLELWNVRVQDGDGREKYGENYSDIWAINRLHFKAASPQFCDHFHDGLGFLTNHGLVSNTFENSLQQVNPKLTLPYWDFTIESSTAGIAANEHLDDMFGSKIKTPLLQESWFGTADPTTRMVQNGRWANVPIPKMREGNPSKIEPDVYSKLRSPWNVNDRRYISRGMGQMCHARAETFYPWPTCESHYNLATSFTDFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVDIEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESG--VCGCHGYDLTQGDDYLQIFESMVFMKELMGDSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAW 703          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE)

HSP 1 Score: 646 bits (1667), Expect = 1.240e-222
Identity = 321/607 (52.88%), Postives = 407/607 (67.05%), Query Frame = 1
Query:   22 PLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNI-NFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEF--FIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLG-VGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAWGDTSSNVKSAD 1830
            PL F ALN Y +RDGKP  DYPWL+D K+IEPHRET LTV++PRDG+ Y WEVR+GD+    V  SA GA     LT LD+NVITL+EV  +G++ R+LDE VMVKYVRREIR+LT+++R +L DAM  LW+ RV+ GNGKE YGD Y+DI+AINRLHFKAA  + CDHFHDGLGF+ SH+L SNTFE+SLQ +NPKLTLPYWDFTIE    AE ++D  D    S + Q S FGS D  D+IVKDGRWAYTK+ +  PGNPG+LN DVYG LRS W  N  PY++RGMG +CN  +  +  PWPTC++HY + T Y  FYSW W S+  PHGPVH WIGG ++C  T   +  LVG   +  L   A   RK  + D  + C+G  ++      V  SA  +CGCLG+DL    D    +     ++F   I  +D+ T+R VV  +C   ++ G+H Q+ SSLDP+FWPMHPTM+RL+ ++ LT +  D  WPD D S +       +E+ S Y + C GH G DVFPF LLD D D FE+ TG++G   +GN+ TNREVLAA DPR N ++Y+YDTFKW HC   G  FD A+ D SS   + D
Sbjct:  126 PLAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGDTDDTEVRASARGAEALITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDDEREELFDAMFTLWDVRVDTGNGKELYGDDYADIYAINRLHFKAAMSETCDHFHDGLGFLTSHSLISNTFEYSLQRVNPKLTLPYWDFTIEDFE-AEKSFDDDDLKIVSPIFQESWFGSADPDDNIVKDGRWAYTKMPAMYPGNPGDLNPDVYGLLRSRWNVNSSPYLTRGMGTLCNTYDVTQIYPWPTCELHYWMATEYSDFYSWVWTSMYAPHGPVHTWIGGVLNCEETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCEGTAEAGATEDDV-FSAG-MCGCLGFDLSSNSDDWQTIYYNSTIDFDNVISDYDDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPDADASSS-------NEMISRYGDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDTAF-DYSSTASAED 721          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI)

HSP 1 Score: 637 bits (1644), Expect = 4.130e-220
Identity = 310/608 (50.99%), Postives = 416/608 (68.42%), Query Frame = 1
Query:   22 PLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYK--FLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLG-VGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAWGDTSSNVKSADHR 1836
            PL F ALN Y +RDGKP  DY WL+D K+IEPHRET L V++PRDG+ Y WEV AG++    ++ +A GA     LT LD+++IT++EV  +G++ R+LDE VMVKYVRREIR+LT+E+R +LLDAMH++W  RV GGNG E +GDGY+DI +INRLHFKAA    CDHFHDGLGF+ SH++ +NTFE+SLQ +NPKLT+PYWDFTIE    AE   D  + +  S + Q S FG+ D  D++VKDGRWA T++ +  P +PG L  DVYG LRS WT N  PY++RG+G++C+ +  +   WP+C+ H+++V  YD FYSW   S+  PHGPVH WIGG ++C +T   +  LVG   +  L       RK L+ D  + C+G+      P    LS+ K CGCLGYDL QG D+K  +    ++F +  IG +D+ T+R+VV  +C   +  G+H  + SSLDP+FW MHPTM+RL+ +S LT  +TDFHWPD++ S T   G ++ E T  Y + C GH G DVFPF LLDGD D F++ TG+ G G  GN LTNREVLA  D RFN + Y+YD F+W HC KDG+ F+DAW  ++S+  SAD++
Sbjct:   92 PLSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPRDGYDYIWEVHAGETDEGDLIATASGAEAVVTLTVLDDSMITVKEVLPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQIWTVRVSGGNGIELFGDGYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHE-AEIAGDDNEMTINSPLFQESWFGTADPVDNVVKDGRWANTEIPAMDPSSPGELIPDVYGLLRSRWTINSSPYLTRGLGKLCDGSVVDTYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHGPVHTWIGGVLNCEDTISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECEGSAAVGT-PADELLSSGK-CGCLGYDLSQGDDWKTIYTNSTVDF-DDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAWDASTSS--SADNK 693          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI)

HSP 1 Score: 612 bits (1578), Expect = 2.640e-210
Identity = 297/576 (51.56%), Postives = 394/576 (68.40%), Query Frame = 1
Query:   79 DYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYK--FLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLG-VGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAW 1797
            DYPWL+D K+IEPHRET L V++PRDG+ Y WEVRAG++    ++ +A GA     LT LDEN+IT++EV  +G++ R+LDE VMVKYVRREIR+LT+E+R +LLDAMH+LW  RV GG G E YGD Y+DI +INRLHFKAA    CDHFHDGLGF+ SH++ +NTFE+SLQ +NPKLT+PYWDFTIE    AE   D  D +  S + Q S FG+ D  D++VKDGRWA T++ +   G+PG L  DVYG LRS WT N  PY++RG+G++C+ +  +   WP+C+ H+++V  YD FYSW   S+  PHGPVH WIGG ++C +T   I  LVG   +  L       RK L+ D  + C+G+        ++ LS    CGCLGYDL QG D+K  +    L+F +  IG +D+ T+R+VV  +C   +  G+H  + SSLDP+FWPMHPTM+RL+ +S LT  +TDFHWPD++ S +   G  + E TS+Y + C GH G DVFPFGLLD D D F++ TG++G    GN LTNREVLA  D R+N + Y+YD F+W HC +DG+ F DAW
Sbjct:  109 DYPWLRDVKLIEPHRETILAVSSPRDGYDYIWEVRAGETDEADLIATASGAEAVVTLTVLDENMITVKEVHPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGEGIELYGDDYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSVLTNTFEYSLQRVNPKLTVPYWDFTIEYHE-AEIAGDDDDITINSPLFQESWFGTADPVDNVVKDGRWARTEIPAMDLGSPGELIPDVYGLLRSRWTVNSSPYLTRGLGKLCDGSVLDTYAWPSCEEHHNLVMDYDDFYSWVSESMYSPHGPVHTWIGGVLNCEDTISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACEGSAAVGAPADELLLSGK--CGCLGYDLNQGDDWKTIYTNSTLDF-DDVIGDYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAW 680          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE)

HSP 1 Score: 577 bits (1488), Expect = 5.570e-195
Identity = 304/687 (44.25%), Postives = 405/687 (58.95%), Query Frame = 1
Query:   22 PLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNPRDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDH-------------------------------FHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHI--------------------------------VKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRP--------------------YISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYKFLMEK-LEFLEFFIGHFDENTQREVVKGICGGVLNFGEH----------GQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLG-VGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAW 1797
            PL F ALN Y +RDGKP  DYPWLK  K+IEPHRET L+V++PRDG  Y WEVRAG++    ++ +A GA     LT LD+NVIT++EV  +G + RRLDE VMVKYVRREIR+LT+E+R +LLDAMH+LW  RV GGNG E+ GDGY+D+  I+RLHFKAA    CDH                               FH+GLGF+ SH++ +NTFE+SLQ +NPKLT+PYWDFTIE   +     D       S + Q S FG+ D  D++                                VKDGRWA T +    PG  G+L  DVYG LRS W  N  P                    Y++RG+G++C  +  E   WP+C+ H+++V  YD FYSW   S+  PHGPVH WI G ++C +T   +  LVG   +  L+      RK L+   ++ C+G     + P    LS+ K CGCLGY+L QG D+K +       L+ FIG +D+ T+R+VV  +C   + +G+H           ++ SSLDP+FWPMHPT++RL+ +S LT  +T+FHWPD+++S T  +G+ + E TS+Y +KC+GH G DVFPFGLLD D D  ++ TG++G G  GN LTNRE LA  D RFN++ Y+YD FKW HC   G+ FDDAW
Sbjct:  120 PLSFQALNFYHIRDGKPAQDYPWLKGVKLIEPHRETTLSVSSPRDGHDYIWEVRAGETDEANLVATARGAEAVVTLTTLDDNVITVKEVHPDGHIVRRLDEVVMVKYVRREIRTLTDEEREELLDAMHQLWVVRVSGGNGIEQDGDGYADMSFISRLHFKAAQNGSCDHVLAEEQGSLLCARGGTLLSAVTQLGDPQNDEFHEGLGFLTSHSMLTNTFEYSLQQVNPKLTVPYWDFTIEYVEAETDGDDEI--KINSPLFQESWFGTADPVDNVAHFKAEWGNSQDARRLLTLTHTPSLAGSCILQVKDGRWANTAIPRTDPGTDGDLIPDVYGLLRSRWVVNSSPPTVHSHLSKPTEPITVKNDRYLTRGLGKLCGGSTVERYGWPSCEDHHNLVMDYDDFYSWVSESMNSPHGPVHTWIAGVLNCEDTISSLSSLVGENNANSLLNTFK-QRKLLWSYGMFGCEGFAAEGI-PTDELLSSGK-CGCLGYNLSQGDDWKTIYANPTSNLDDFIGDYDDETKRQVVAAVCASTIYYGDHLHVSVRALFGHEAGSSLDPTFWPMHPTIERLFVFSALTGQLTNFHWPDSELSYTDTNGDTVVETTSNYGDKCYGHGGSDVFPFGLLDNDDDALKIKTGMQGNGETGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAW 801          
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 3.310e-178
Identity = 261/520 (50.19%), Postives = 350/520 (67.31%), Query Frame = 1
Query:  268 VITLEEVGEEGKVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEKYGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQIINPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHIVKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMCNINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNIDCTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPYKVRLSADKICGCLGYDLEQGGDYK--FLMEKLEFLEFFIGHFDENTQREVVKGICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPDNDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTGIRGLG-VGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAW-GDTSSN 1815
            +IT++EV  +G++ R+LDE VMVKYVRREIR+LT+E+R +LLDAMH+LW  RV GG G E YGD Y+DI +I+RLHFKAA    CDHFHDGLGF+ SH++ +NTFE+SLQ +NPKLT+PYWDFTIE    AE   D  D +  S + Q S FG+ D  D++VKDGRWA T++ +  PG+PG L  DVYG LRS W  N  PY++RG+G++C+ +  +   WP+C+ H+++V  YD FYSW   S+  PH PVH WIGG ++C +T   I  LVG   +  L       RK+L+ D  + C+G+      P    LS+ K CGCLGYDL QG D+K  +    L+F +  IG +D+ T+R+VV  +C   +  G+H  + SSLDP+FWPMHPTM+RL+ +S LT  +TDF+WPD++ S +   G  + E TS Y + C GH G DVFPFGLL+ D   F++ TG+ G    GN LTNREVLA  D R+N + Y+YD F+W HC +DG+ F DAW   T+SN
Sbjct:    1 MITVKEVHPDGEIVRQLDEIVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGKGIELYGDDYADISSISRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHE-AEIAGDDDDITINSPLFQESWFGTADPVDNVVKDGRWARTEIPAMDPGSPGELIPDVYGLLRSRWIVNSSPYLTRGLGKLCDGSVVDMYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHAPVHTWIGGVLNCEDTISYISSLVGEKNANSLSLNTFDQRKSLWRDDFFACEGSAAVGA-PADELLSSGK-CGCLGYDLSQGDDWKTIYTNSTLDF-DDVIGDYDDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAWDASTASN 516          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15275.3486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC28_ECTSI1.770e-25456.03TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
D8LC42_ECTSI6.330e-24754.23TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
D8LC46_ECTSI3.530e-24555.02Tyrosinase_Cu-bd domain-containing protein n=3 Tax... [more]
A0A6H5J7R8_9PHAE5.960e-24456.20TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5J676_9PHAE2.810e-23755.17TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5JRR4_9PHAE1.240e-22252.88TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D7FW00_ECTSI4.130e-22050.99Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
D7G9A4_ECTSI2.640e-21051.56Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
A0A6H5K485_9PHAE5.570e-19544.25TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LB18_ECTSI3.310e-17850.19ShTK domain containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15275contigH-elongata_contig15275:1352..7308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score211.1
Seed ortholog evalue1.5e-51
Seed eggNOG ortholog44056.XP_009040493.1
EggNOG free text desc.ERAD pathway
EggNOG OGsCOG0790@1,KOG1550@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size1872
Cds size1872
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15275.3486.1prot_H-elongata_contig15275.3486.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15275 1352..7308 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929903.1582825-CDS-H-elongata_contig15275:1351..18311622929903.1582825-CDS-H-elongata_contig15275:1351..1831Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 1352..1831 -
1691679201.8407612-CDS-H-elongata_contig15275:1351..18311691679201.8407612-CDS-H-elongata_contig15275:1351..1831Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 1352..1831 -
1622929903.1772208-CDS-H-elongata_contig15275:2286..24691622929903.1772208-CDS-H-elongata_contig15275:2286..2469Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 2287..2469 -
1691679201.852985-CDS-H-elongata_contig15275:2286..24691691679201.852985-CDS-H-elongata_contig15275:2286..2469Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 2287..2469 -
1622929903.2440286-CDS-H-elongata_contig15275:2667..28371622929903.2440286-CDS-H-elongata_contig15275:2667..2837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 2668..2837 -
1691679201.8625705-CDS-H-elongata_contig15275:2667..28371691679201.8625705-CDS-H-elongata_contig15275:2667..2837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 2668..2837 -
1622929903.2633116-CDS-H-elongata_contig15275:3382..35521622929903.2633116-CDS-H-elongata_contig15275:3382..3552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 3383..3552 -
1691679201.8745122-CDS-H-elongata_contig15275:3382..35521691679201.8745122-CDS-H-elongata_contig15275:3382..3552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 3383..3552 -
1622929903.2801814-CDS-H-elongata_contig15275:3769..38881622929903.2801814-CDS-H-elongata_contig15275:3769..3888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 3770..3888 -
1691679201.8829339-CDS-H-elongata_contig15275:3769..38881691679201.8829339-CDS-H-elongata_contig15275:3769..3888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 3770..3888 -
1622929903.2954347-CDS-H-elongata_contig15275:4245..44671622929903.2954347-CDS-H-elongata_contig15275:4245..4467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 4246..4467 -
1691679201.8908558-CDS-H-elongata_contig15275:4245..44671691679201.8908558-CDS-H-elongata_contig15275:4245..4467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 4246..4467 -
1622929903.3157284-CDS-H-elongata_contig15275:6397..65261622929903.3157284-CDS-H-elongata_contig15275:6397..6526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 6398..6526 -
1691679201.8983817-CDS-H-elongata_contig15275:6397..65261691679201.8983817-CDS-H-elongata_contig15275:6397..6526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 6398..6526 -
1622929903.33084-CDS-H-elongata_contig15275:6909..73081622929903.33084-CDS-H-elongata_contig15275:6909..7308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 6910..7308 -
1691679201.9060097-CDS-H-elongata_contig15275:6909..73081691679201.9060097-CDS-H-elongata_contig15275:6909..7308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15275 6910..7308 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15275.3486.1

>prot_H-elongata_contig15275.3486.1 ID=prot_H-elongata_contig15275.3486.1|Name=mRNA_H-elongata_contig15275.3486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=624bp
LAESTQEPLYFTALNLYQVRDGKPGMDYPWLKDFKVIEPHRETYLTVTNP
RDGFGYRWEVRAGDSSGDTVLVSAMGASTAAILTKLDENVITLEEVGEEG
KVSRRLDETVMVKYVRREIRSLTEEDRNDLLDAMHELWEERVEGGNGKEK
YGDGYSDIWAINRLHFKAATIDYCDHFHDGLGFMVSHTLTSNTFEHSLQI
INPKLTLPYWDFTIESSSSAEPTYDPTDPSTKSWVLQPSVFGSCDTRDHI
VKDGRWAYTKVASALPGNPGNLNTDVYGNLRSPWTTNDRPYISRGMGQMC
NINFDEYLPWPTCQIHYDIVTGYDTFYSWAWNSLGGPHGPVHFWIGGNID
CTNTYKRIGDLVGPAISVELVYLANAHRKTLYYDRIWRCDGNVDSSVKPY
KVRLSADKICGCLGYDLEQGGDYKFLMEKLEFLEFFIGHFDENTQREVVK
GICGGVLNFGEHGQSSSSLDPSFWPMHPTMDRLWHYSVLTESITDFHWPD
NDVSITLPSGEVISEVTSSYYEKCFGHRGMDVFPFGLLDGDGDDFEVWTG
IRGLGVGNNLTNREVLAAFDPRFNSMNYIYDTFKWPHCEKDGVFFDDAWG
DTSSNVKSADHRFFERTAPLSGMY
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mRNA from alignment at H-elongata_contig15275:1352..7308-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15275.3486.1 ID=mRNA_H-elongata_contig15275.3486.1|Name=mRNA_H-elongata_contig15275.3486.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5957bp|location=Sequence derived from alignment at H-elongata_contig15275:1352..7308- (Himanthalia elongata Himel1 dioecious)
TTGGCGGAGTCGACTCAAGAACCCTTGTACTTCACAGCGCTCAACCTTTA TCAAGTCCGGGACGGGAAACCCGGTATGGACTACCCCTGGTTGAAGGACT TCAAGGTTATCGAGCCTCACCGAGAGACATACCTGACGGTGACGAACCCA CGTGACGGTTTCGGGTATCGATGGGAGGTCCGCGCAGGAGACTCAAGCGG CGACACTGTCCTTGTTTCTGCGATGGGTGCAAGTACGGCTGCTATCCTTA CAAAGCTCGACGAGAACGTGATCACGCTAGAGGAGGTGGGCGAGGAGGGG AAGGTTTCCCGTCGCCTGGATGAGACGGTGATGGTCAAGTACGTACGCAG GGAGATCAGATCACTTACTGAAGAAGATAGAAACGACCTGCTCGATGCGG TGAGAGGAATCGAAAAACGTTTTCATCTGTCGAGAAAACGCTGTTGTTCT AGATTATGCTAATCCACCCTCTTACTTTGTGGAGTGCCTCCCACAGAACT CGTCCTCGTAAGACATTCTGTTAAACTTATACGATTTGAATTCCTTAAGC GCAGTTGTCCACGCGCTTAAAGCTCAGCGGTAGTTGTAGTCGTTGGTAGA TTATAACAGCACTACTACAACAAGTACTACTGTCTTGATGTCTTCCATGA TCCCGAGAGGTACCGGCATGAAGCTTTTGTGATTACTCTGATGTATCGTC GCTGTCTCTTTCCTGGAGATGGACTACTCCTACTGCAGTTGAATCCCTCC GAACATAAAAATTGCGTCCTTTTCTGTGGCAGATGCATGAGTTGTGGGAA GAACGAGTGGAAGGCGGCAACGGCAAGGAGAAATATGGTGATGGGTACTC TGACATTTGGGCGATCAACCGCCTACACTTCAAGGCTGCGACCATCGACT ACTGCGATCATGTGAGTGTTCTTACTACCCTCCTTGCCTGCTGCAATGTC CTATGAACAGTTATCTCCGAACTTCGTGCTGGCATAAAAACAAGTAGAGA TTATTTATTATTTTTTTCACTCTACAGCAGCAGTATCTTGAATACGGGGG AAAATATATCCAAGGTACGAAGAACTGGAAAACATTTAAAAATCATTTTG ATCGATTGATTGATTTGATTGATTGAATTAATTATTTCATAAGCTGATGT AAAAATCCAGCCCGTGGTCATAAAATAAAAAAAACACTATCCGGAAGGAG AAAAACGTTCAACGTACTCTTCAATACAAAAAGGAAACGGCAATGATGCA TAATACAAATACTCGGAAAAAGCGACATCTCCAAAGAAAAAGAAACACAA AAAAGAGGACACACACAGTTGTTAACGAACTGCATGTGGTTATCGAGACG CGGACCTATCGTAGAACGATTGAGCGAAGAGCCACGGGTTCAATGGAAGC AAAAAAGACAAAGAGAAAACGTAGCGCCAGAGAAAGGCAATATGATATCG GCAAGCAAAAAACACTTGGGGGATAAGTTCGCGCCACTCGTGGCGAATCA ACTATGGCGAGCAAACCAGCACGAGCACGCTGTTTGTGTTGGGCTATCCT CTTCTTGGTCCTTCCCGTCACGTTCGGACGTGCTAGGGCATGCCGTAGTC CAGTCCTGACTTTTTCTGCAACGATCCAATTCTCCATGAAATGTTCCGCC CCTTGTTCCCCTGTCTTGCGCCACTCGCCTTCTTCCTGGGCTGCAGTCGT CCACTGGTCGGCGTTGATACCAAATGCTTTGAGGTCTTTCAGAAGACACC CCATCCACTCTTTTTCCTGCCCACCCACGCGACCCGCGGCCCCCATGATT TCTCCGAACATTTTACGCACTTCGACAATCTCGTGTCGCTCATGCGCGCC ACAAATCCCGCGAACAGGATCCGCCTTTTCTTCGCATGATCGTCTCGATG CTCTTACTTTTCGTCTTCATGAGGGTATCCATATAAGAGTTCGGGTGATC GGTGCGATTGCTCTTTCGCCAACCGATACAGCGAGTCAAGAAGCTGTGGT GTGCTCGGCGCAGCGTGTTGTAGTGGCACGCGCGCGGACTCCACGTGACG CAGTCGTACATCATTGTCTTGAGTATCTCGGCTTCCAGCATCCGGATTTT GAGCTCCAGGGCGTCGCTAGGTCGGTAGTGCAGTTCCAGGGTGTCCTTTC AGAACTTCCACCATGCGTTGCTTATGCGCCGGTCGACCTCGATCGACATA TCTGCGTTGTGGTCGACGTTTCCCCCGAGGTATACAAAATCGTTCGTTTG GCTGTACACCTGGCCGCATGCTTCTACGCTGAATATTGCGGTGGTCTCCA GCATCCCCTTCGTGCGTAACCACACAATCTTAGTTTCGGCCTCCGACACG GTGACACCAAACGCTGCGCATACGACCACAACGAACCTCATTATCTTCCT AAGGTGCTCTGGTGATTGTGAGATGTCTCCCTTCGGGCCTGGCTATAAAT TTTACAAGGGATAATCGAGAGTTCTCCGTCGTACAAATCCGAATACGTTT TACCGGAAGTACTTCGTTTTCCTTAAACAAAAACATATGAACTCATTTCA AACCCATCCGAACATCCACACCGACTTATTTGTGCCACGTGGAGTGAAGT CCAGGGGACCAACTATCGTCAGGTTTGAGTATGTAAATTACTACGTACAA GCACAAAATTGGAACATCATGCGATTGATCGTGTTCCCCAATGATAACCC CATTGGGTGACTAGTATAATGTCGGGGAAAAGCCAACCGTTATACTGTGC ACTTACATTATATTATTCATCATTATTTCCATTCAACTGTGCGGCTCTGA TTCCCACGTTTCCCGAAATCCCGTCTGGTGTTTTGATACAGTTCCACGAC GGCCTCGGCTTCATGGTGAGCCACACGCTTACCTCCAACACCTTCGAGCA CAGCCTCCAGATCATCAATCCCAAGCTCACTCTCCCCTACTGGGACTTTA CGATTGAGTCATCTTCCTCAGCGGAGCCGACGTATGATCCGACCGATCCC AGCACCAAGAGCTGGGTTCTGCAGCCATCCGTTTTCGGCTCGTGCGACAC CCGTGACCACATCGTGAGTATGTATCAATATTATGTTCGAAGATGCGACG TGCGCTGAACCCTAGTTGGGTAGAGAGTCAACGGTACCGTTTGTCCAGAA ACTCTCAACGGGCCCCATGATTTATTCTTCCCCCCTGACCATTCTCCCTA TCAATAACTGCCATCCCAGGATAAAATTGCAGCTAAGTTTTCGGGCTTCG TTATAGTATAGGCATACCATCGCACGCGGTTGCTCCTATAGATGGAACAT CCGCCTTCGCACTTATTGTCGTAATTTATAACAACTCGTCGGTGTCCATA AAACGACGCGTACTGGTCGCGCGTTTTAATATCTCCCGTTTCGCGTCTGT TGTGCACGCTCGTTGTGAAGGTTAAAGATGGTCGCTGGGCTTACACAAAG GTCGCCTCGGCGTTGCCCGGCAACCCGGGTAACCTCAACACGGACGTCTA CGGCAATTTACGATCACCTTGGACCACCAACGACAGACCGTGAGAGTCGA TTCAAGAGTTTTATTAGTTCGCCATGTTGCACTCAACGCGTACTTGTCCG GTTTGAAAATGTGCTGCTATACTCTGCTGTGGTCGGAGCCCGCTGTCACC CAACCCGGGAAGCTAATATTTCTATAACACGCAACATCTGATTATTACAC CCTCATCCCGTCACACCCTGGGCGTGCGGAATGGACACTGAAATTCGACG ATATAGATATATTTCGAGGGGAATGGGACAGATGTGCAACATTAACTTCG ATGAGTACCTCCCGTGGCCGACATGCCAAATTCACTACGACATCGTCACC GGGTACGATACCTTTTACAGCTGGGCTTGGAATAGCTTGGGAGGTCCCCA CGGCCCCGTCCACTTTTGGATCGGAGGTGAAAATACGCGTTACGTGCATC CATGCATTCTTAACAATCTAGACAAGCTGCACGCGGAACCCCCGAGGTGG CCTTTATTTTACGGTGTTGGTAACGATTCAACAGTTACATTTGATAGCTG CAACGTGTGACGAATGACGGGTTTCTTGCGATTTCTCGTTAACCTAGACA CGTACCAGAACATTTTATAATAATACACGTACAACGAGAACCACTACGCA ACATCATAATGCTCTGCGTACTTCACGCATCAGCCGCAAGGCCTCATAGC TTTGTGAAAGGAGTGCACGAGAGTCTGGTACATAGGGAATGGGAAAGGGA CTAGACATGAATGGAATAAGACGTCTAGGCATTGAGTGGAATTGTTCTAC CGTAGCGCGGTGAGAAGTGCAAACACTCACTGTACATGCTAGAATTTACT AATTCACGGTAATATAATTATTATCCCCCGATAACATATATATATATATA TATATATATATATATATGTAAGGAGAGAAACGCGATGAAATGGCGTCCGT TAACCCCGAACTTATTGACAGGAAATATTGATTGCACGAACACATACAAA AGGATCGGCGACTTGGTGGGCCCGGCTATCTCTGTCGAACTCGTTTATCT GGCGAATGCCCATCGCAAAACTCTATACTACGATCGTATCTGGAGATGCG ATGGTAACGTGGACTCTAGCGTAAAGCCGTACAAGGTGAGAGTGGTGATA TCTCCCGCAGCACACGAATATCATCATGTTTTATTGCGCCCCTTTTTGTG TTTGAATTGTATCGGGCATAGTCTAACCCTGTCAGTCCAACGAACGATAC ATGACGGAACAAACGCAATGTGCTATCGCTTTAAGTTTCTGCCTGTTGTC ATTTTGACCACCCATCTCTGTCCCGACATAACGCAACAGCTCTCTGCCGA CAAGATCTGCGGCTGCCTAGGGTATGATCTGGAACAAGGAGGCGACTACA AGTTCTTGATGGAGAAGTTGGAGTTCCTAGAATTCTTCATCGGCCACTTC GATGAGAACACTCAACGAGAGGTCGTTAAGGGCATTTGCGGTGGCGTACT AAACTTCGGCGAACACGGGCAGGTGATGGATGTCGACATCGGCAGCTTTC GGCGGAGAGTCGCGTTGGCAGTGTCACCTAAATCTCTTGAGCCTCAAGAG TGAACGTTGCCACTACCTTGCTATAGGTCACATGTATTGCACTATAAGGC AAAGGCGAAGGTAGTAGTTGGTTAACAACATTTGACATCCGTCAAGTCCC CATCTGGGTATAGCCTAAGTATGCGGATAAAATTCACCCTTAGTTAGTGG CGGCATTTTCCTTTATCGGTATAGCATCTCTACGTGTGGTTCACTGTGCA GAGTTCTCCCGCAACTTAGAGCAGTGTTCTCTAAATCTACGCAAGTTGTG ACGAGCTTCGATAATTCAGGGCGATAGGGACTGTGTAGATGTACGTAAAA TCCGTCTATAATGGACAACTTATATACCCCCCCCCTGATACATTGTCTCC TTGGCCCTTCTTCTACATTGGCACCAGTCGAGCTCCTCGCTGGACCCGTC CTTCTGGCCGATGCACCCTACCATGGATCGCCTGTGGCACTACTCTGTGC TCACCGAGAGCATCACCGATTTCCACTGGCCGGACAATGACGTGAGTATA ACCCTTCCAAGCGGCGAAGTCATATCGGAAGTGACCAGTAGCTACTACGA GAAATGCTTTGGTCACCGCGGAATGGACGTCTTTCCCTTCGGATTACTGG ACGGCGACGGGGACGACTTTGAAGTGTGGACCGGCATACGTGGGTTGGGC GTTGGCAACAACCTCACGAACCGAGAAGTCCTAGCAGCTTTCGACCCTCG ATTCAATTCCATGAACTACATCTATGACACCTTCAAGTGGCCGCACTGCG AGAAGGATGGCGTTTTCTTTGACGATGCGTGGGGGGACACGAGCAGTAAT GTAAAGTCCGCAGACCACAGGTTTTTCGAGAGGACGGCGCCTCTGTCCGG TATGTAT
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Coding sequence (CDS) from alignment at H-elongata_contig15275:1352..7308-

>mRNA_H-elongata_contig15275.3486.1 ID=mRNA_H-elongata_contig15275.3486.1|Name=mRNA_H-elongata_contig15275.3486.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3744bp|location=Sequence derived from alignment at H-elongata_contig15275:1352..7308- (Himanthalia elongata Himel1 dioecious)
TTGGCGGAGTCGACTCAAGAACCCTTGTACTTCACAGCGCTCAACCTTTA
TCAAGTCCGGGACGGGAAACCCGGTATGGACTACCCCTGGTTGAAGGACT
TCAAGGTTATCGAGCCTCACCGAGAGACATACCTGACGGTGACGAACCCA
CGTGACGGTTTCGGGTATCGATGGGAGGTCCGCGCAGGAGACTCAAGCGG
CGACACTGTCCTTGTTTCTGCGATGGGTGCAAGTACGGCTGCTATCCTTA
CAAAGCTCGACGAGAACGTGATCACGCTAGAGGAGGTGGGCGAGGAGGGG
AAGGTTTCCCGTCGCCTGGATGAGACGGTGATGGTCAAGTACGTACGCAG
GGAGATCAGATCACTTACTGAAGAAGATAGAAACGACCTGCTCGATGCGT
TGGCGGAGTCGACTCAAGAACCCTTGTACTTCACAGCGCTCAACCTTTAT
CAAGTCCGGGACGGGAAACCCGGTATGGACTACCCCTGGTTGAAGGACTT
CAAGGTTATCGAGCCTCACCGAGAGACATACCTGACGGTGACGAACCCAC
GTGACGGTTTCGGGTATCGATGGGAGGTCCGCGCAGGAGACTCAAGCGGC
GACACTGTCCTTGTTTCTGCGATGGGTGCAAGTACGGCTGCTATCCTTAC
AAAGCTCGACGAGAACGTGATCACGCTAGAGGAGGTGGGCGAGGAGGGGA
AGGTTTCCCGTCGCCTGGATGAGACGGTGATGGTCAAGTACGTACGCAGG
GAGATCAGATCACTTACTGAAGAAGATAGAAACGACCTGCTCGATGCGAT
GCATGAGTTGTGGGAAGAACGAGTGGAAGGCGGCAACGGCAAGGAGAAAT
ATGGTGATGGGTACTCTGACATTTGGGCGATCAACCGCCTACACTTCAAG
GCTGCGACCATCGACTACTGCGATCATATGCATGAGTTGTGGGAAGAACG
AGTGGAAGGCGGCAACGGCAAGGAGAAATATGGTGATGGGTACTCTGACA
TTTGGGCGATCAACCGCCTACACTTCAAGGCTGCGACCATCGACTACTGC
GATCATTTCCACGACGGCCTCGGCTTCATGGTGAGCCACACGCTTACCTC
CAACACCTTCGAGCACAGCCTCCAGATCATCAATCCCAAGCTCACTCTCC
CCTACTGGGACTTTACGATTGAGTCATCTTCCTCAGCGGAGCCGACGTAT
GATCCGACCGATCCCAGCACCAAGAGCTGGGTTCTGCAGCCATCCGTTTT
CGGCTCGTGCGACACCCGTGACCACATCTTCCACGACGGCCTCGGCTTCA
TGGTGAGCCACACGCTTACCTCCAACACCTTCGAGCACAGCCTCCAGATC
ATCAATCCCAAGCTCACTCTCCCCTACTGGGACTTTACGATTGAGTCATC
TTCCTCAGCGGAGCCGACGTATGATCCGACCGATCCCAGCACCAAGAGCT
GGGTTCTGCAGCCATCCGTTTTCGGCTCGTGCGACACCCGTGACCACATC
GTTAAAGATGGTCGCTGGGCTTACACAAAGGTCGCCTCGGCGTTGCCCGG
CAACCCGGGTAACCTCAACACGGACGTCTACGGCAATTTACGATCACCTT
GGACCACCAACGACAGACCGTTAAAGATGGTCGCTGGGCTTACACAAAGG
TCGCCTCGGCGTTGCCCGGCAACCCGGGTAACCTCAACACGGACGTCTAC
GGCAATTTACGATCACCTTGGACCACCAACGACAGACCATATATTTCGAG
GGGAATGGGACAGATGTGCAACATTAACTTCGATGAGTACCTCCCGTGGC
CGACATGCCAAATTCACTACGACATCGTCACCGGGTACGATACCTTTTAC
AGCTGGGCTTGGAATAGCTTGGGAGGTCCCCACGGCCCCGTCCACTTTTG
GATCGGAGATATATTTCGAGGGGAATGGGACAGATGTGCAACATTAACTT
CGATGAGTACCTCCCGTGGCCGACATGCCAAATTCACTACGACATCGTCA
CCGGGTACGATACCTTTTACAGCTGGGCTTGGAATAGCTTGGGAGGTCCC
CACGGCCCCGTCCACTTTTGGATCGGAGGAAATATTGATTGCACGAACAC
ATACAAAAGGATCGGCGACTTGGTGGGCCCGGCTATCTCTGTCGAACTCG
TTTATCTGGCGAATGCCCATCGCAAAACTCTATACTACGATCGTATCTGG
AGATGCGATGGTAACGTGGACTCTAGCGTAAAGCCGTACAAGGTGAGAGA
AATATTGATTGCACGAACACATACAAAAGGATCGGCGACTTGGTGGGCCC
GGCTATCTCTGTCGAACTCGTTTATCTGGCGAATGCCCATCGCAAAACTC
TATACTACGATCGTATCTGGAGATGCGATGGTAACGTGGACTCTAGCGTA
AAGCCGTACAAGGTGAGACTCTCTGCCGACAAGATCTGCGGCTGCCTAGG
GTATGATCTGGAACAAGGAGGCGACTACAAGTTCTTGATGGAGAAGTTGG
AGTTCCTAGAATTCTTCATCGGCCACTTCGATGAGAACACTCAACGAGAG
GTCGTTAAGGGCATTTGCGGTGGCGTACTAAACTTCGGCGAACACGGGCA
GCTCTCTGCCGACAAGATCTGCGGCTGCCTAGGGTATGATCTGGAACAAG
GAGGCGACTACAAGTTCTTGATGGAGAAGTTGGAGTTCCTAGAATTCTTC
ATCGGCCACTTCGATGAGAACACTCAACGAGAGGTCGTTAAGGGCATTTG
CGGTGGCGTACTAAACTTCGGCGAACACGGGCAGTCGAGCTCCTCGCTGG
ACCCGTCCTTCTGGCCGATGCACCCTACCATGGATCGCCTGTGGCACTAC
TCTGTGCTCACCGAGAGCATCACCGATTTCCACTGGCCGGACAATGACGT
GAGTATAACCCTTCCAAGCGGCGAAGTCATATCGGAAGTGACCAGTAGCT
ACTACGAGAAATGCTTTGGTCACCGCGGAATGGACGTCTTTCCCTTCGGA
TTACTGGACGGCGACGGGGACGACTTTGAAGTGTGGACCGGCATACGTGG
GTTGGGCGTTGGCAACAACCTCACGAACCGAGAAGTCCTAGCAGCTTTCG
ACCCTCGATTCAATTCCATGAACTACATCTATGACACCTTCAAGTGGCCG
CACTGCGAGAAGGATGGCGTTTTCTTTGACGATGCGTGGGGGGACACGAG
CAGTAATGTAAAGTCCGCAGACCACAGGTTTTTCGAGAGGACGGCGCCTC
TGTCCGGTATGTATTCGAGCTCCTCGCTGGACCCGTCCTTCTGGCCGATG
CACCCTACCATGGATCGCCTGTGGCACTACTCTGTGCTCACCGAGAGCAT
CACCGATTTCCACTGGCCGGACAATGACGTGAGTATAACCCTTCCAAGCG
GCGAAGTCATATCGGAAGTGACCAGTAGCTACTACGAGAAATGCTTTGGT
CACCGCGGAATGGACGTCTTTCCCTTCGGATTACTGGACGGCGACGGGGA
CGACTTTGAAGTGTGGACCGGCATACGTGGGTTGGGCGTTGGCAACAACC
TCACGAACCGAGAAGTCCTAGCAGCTTTCGACCCTCGATTCAATTCCATG
AACTACATCTATGACACCTTCAAGTGGCCGCACTGCGAGAAGGATGGCGT
TTTCTTTGACGATGCGTGGGGGGACACGAGCAGTAATGTAAAGTCCGCAG
ACCACAGGTTTTTCGAGAGGACGGCGCCTCTGTCCGGTATGTAT
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