mRNA_H-elongata_contig15264.3478.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A6H5KU25_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU25_9PHAE) HSP 1 Score: 324 bits (830), Expect = 8.640e-105 Identity = 172/252 (68.25%), Postives = 197/252 (78.17%), Query Frame = 1
Query: 136 ACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTV-------DMTRSSGGNAVTPDDFNKLLESTLLGDP--ALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSR---RPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
A E+RDRFIP+RSSMCM RSNYLMSK+N+ + GGN+ +F K+LES LLG P A G+R+L F NKAPAQ+EGYQNG +V YSQNK +R S RPTRHIPS PVRILDAP+L++DYYLNLLSWGSNDVLAVALGQCVYLWNA++GDITEL SL G DYVSSV+WT SGTHLAVGT GGETQFWD++ +T LR+MNGHSARVGALAWNEH++TSGS DTTAVHHDLR
Sbjct: 78 AVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENTAPGGAGFTSAAVDGGNSG---EFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSGAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWGSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLR 326
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: W7UCG6_9STRA (Cell division cycle 20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCG6_9STRA) HSP 1 Score: 231 bits (588), Expect = 2.480e-70 Identity = 134/307 (43.65%), Postives = 189/307 (61.56%), Query Frame = 1
Query: 1 PFTTLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNS---------------------SDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTK-SGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
PF + VMPRW+RKKLQ+ S + + + ++ S DRFIP RS M M++++Y +SK+N + D ++ + V ++++ LE+ LL E +R+L F NKAP KEG+QN +V Y+QNK A S R RHIPS P RILDAP+L++DYYLN++ WG+++VLA+AL Q +YLWNA GDITEL+S+ A DY++SV+W + +G+HLA+GT +TQ WD AA ++R+MNGHSARV ALAW H+++SGS D T VHHD+R
Sbjct: 38 PFESKVMPRWERKKLQKL-------GSAAGAGLDGDKTGS----------HDRFIPNRSGMHMDKAHYALSKENPNPQGDDDKKDDSASLVEDRAMGEDGMEKVSKQEASMVQKKEYHQALEAQLLDG----EKEHRVLAFRNKAPLPKEGFQNHLQVLYTQNKGTAPS-SLRSYRHIPSAPERILDAPDLLDDYYLNIMDWGASNVLAIALTQTLYLWNAATGDITELMSVPDADDYITSVSWIQDTGSHLAIGTASAQTQLWDVAAQKQVRSMNGHSARVSALAWKRHILSSGSRDATIVHHDVR 322
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S1TZ58_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ58_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.070e-68 Identity = 131/283 (46.29%), Postives = 182/283 (64.31%), Query Frame = 1
Query: 10 TLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSG-THLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
T MPRWQRK+L + S S + SS E DRFIP+R++M M+ S+Y ++ K N + + GG + NK L+++LL + G+R+L F NKAPA ++GY+N +V Y+ NK A + + TRHIPS P+RILDAP+L++DYYLNL+SW S + +AVALG VYLW+A G I+EL++L YVSSV+W + G THLAVGT+ TQ WD +A ++R+M+GH++RVGALAWN+HL+ SGS DTT V+HD+R
Sbjct: 23 TSKMPRWQRKQL-----------AASLSGESGGAGDSSG------EGTDRFIPSRANMDMDHSHYSVNSKENGENGI------GGKSPAKASLNKALKNSLL------DKGHRVLAFKNKAPAPRDGYENHLRVLYTANKGAADKAAVKSTRHIPSAPLRILDAPDLLDDYYLNLVSWSSTNTVAVALGPSVYLWDAATGGISELMTLEDESQYVSSVSWIQEGGTHLAVGTSTALTQLWDVSATKQVRSMDGHTSRVGALAWNQHLLASGSADTTVVNHDVR 276
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S2WBP6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBP6_9STRA) HSP 1 Score: 217 bits (553), Expect = 8.030e-64 Identity = 129/281 (45.91%), Postives = 179/281 (63.70%), Query Frame = 1
Query: 16 VMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSGT-HLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
V PRW+RK LQQ+ A S +R S + ++ + DRFIP R +M + +++ + K+NNS+ S+ ++ T +FNK L +++ G +R+L F KAPA EGY+N KV Y+QNK + G + +P RHIPS P RILDAP+L++DYYLNL+ WGS+++LAVALGQ VYLWNA G I EL G DY++SV + + G +LAVGT ET+ WD LRNM+GHSARV +LAWN+H+++SGS D+T VHHD+R
Sbjct: 27 VQPRWKRKALQQRV------AKTPKSGRKRSR-SKTPAKGKNTPQHDRFIPNRGAMDLANAHFNLMKENNSA------ASNAVDSPTRAEFNKALANSMGA------GDHRVLAFKKKAPAPPEGYENSLKVLYTQNKAKL-GKTHKPARHIPSAPERILDAPDLLDDYYLNLVDWGSSNMLAVALGQTVYLWNAETGGIEELCQCEGEDDYITSVKFVQEGGGYLAVGTNFCETKLWDIETSKLLRNMDGHSARVSSLAWNQHILSSGSRDSTIVHHDVR 287
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S3UT71_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT71_HETAK) HSP 1 Score: 206 bits (525), Expect = 6.690e-63 Identity = 111/226 (49.12%), Postives = 149/226 (65.93%), Query Frame = 1
Query: 181 MCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSG-THLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
M M+ +NY +SK+N S N N +L+ LL + +RIL +KAPA KEG+QN K+ YSQN+ A + RHIPS P RILDAP++++DYYLNLLSW ++VLAVAL Q VYLW A G ITEL+S+ + DY+SSV+W + G +HLA+GT +TQ WD A ++R+MNGH+ARVG+LAWN H+++SGS D+T VHHD+R
Sbjct: 1 MNMDMANYALSKEN-----------SDPNCPEEQGRNDMLKQNLLSAGDDSDKAHRILSLKHKAPAPKEGHQNSLKILYSQNQGCATYAKSK--RHIPSAPSRILDAPDVVDDYYLNLLSWSKSNVLAVALNQSVYLWEAATGSITELMSVTDSDDYISSVSWIQEGGSHLAIGTANAKTQLWDCTASRQVRSMNGHAARVGSLAWNRHILSSGSRDSTIVHHDVR 213
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S3GA86_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GA86_9EUKA) HSP 1 Score: 209 bits (533), Expect = 3.050e-61 Identity = 112/234 (47.86%), Postives = 155/234 (66.24%), Query Frame = 1
Query: 154 DRFIPTRSSMCMERSN-YLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGAGDYVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
DRFIP+R +M E S+ YL +N+SS R SG + +++ L STLL D L + +IL F NKAP KEG+QN K Y+QNK + ++ TRHIP P +ILDAP L++DYYLNLL W ++++LAVAL Q VYLWNA +GDI EL+ + YVSSV+W + G++LAVG + GE Q W+ + ++R M GHS+RVG+L+WN ++++SGS D T H D+R
Sbjct: 33 DRFIPSRPAMDFELSHSYLTQPENDSS----FNRPSGPQSPLKEEYRSTLASTLL-DTDLSQDSSKILAFKNKAPEPKEGWQNSMKALYTQNKVKEVQRKQKVTRHIPQAPEKILDAPQLLDDYYLNLLDWNADNILAVALSQTVYLWNATSGDIDELMQVDGELYVSSVSWIQEGSYLAVGISNGEVQLWEVSQKKKIRTMFGHSSRVGSLSWNSYILSSGSRDATIRHSDVR 261
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A4D9DDJ3_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDJ3_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.390e-60 Identity = 106/196 (54.08%), Postives = 143/196 (72.96%), Query Frame = 1
Query: 271 VTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTK-SGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
V ++++ LE+ LL E +R+L F NKAP KEG+QN +V Y+QNK A S R RHIPS P RILDAP+L++DYYLN++ WG+++VLA+AL Q +YLWNA GDITEL+S+ A DY++SV+W + +G+HLA+GT +TQ WD AA ++R+MNGHSARV ALAW H+++SGS D T VHHD+R
Sbjct: 17 VQKKEYHQALEAQLLDG----EKEHRVLAFRNKAPLPKEGFQNHLQVLYTQNKGTAPS-SLRSYRHIPSAPERILDAPDLLDDYYLNIMDWGASNVLAIALTQTLYLWNAATGDITELMSVPDADDYITSVSWIQDTGSHLAIGTASAQTQLWDVAAQKQVRSMNGHSARVSALAWKRHILSSGSRDATIVHHDVR 207
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S3VH96_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VH96_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.700e-60 Identity = 127/292 (43.49%), Postives = 179/292 (61.30%), Query Frame = 1
Query: 7 TTLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRP----SSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGP--SRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGAGD---YVSSVAWTKSG-THLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
T+ MPRW+RK+L+ +Q N+ + S S + + SS+S + C RFIP R++M E+S + + + ++SSD S G++ D++ L S +LG +RIL F KAPA K N KV YS + ++ S+ TR IPS P RILDAP+L++DYY+NLLSW ++LAVAL Q VYLWNA +GDI EL S + YVSSV+W K G THLA+GT+ G TQ WD A RLR+M+GH+ RVG+L+WN H++++G D+ V+HD+R
Sbjct: 25 TSAAMPRWKRKQLEAAMSQAENNVNASPSKKEALKQPLAQSSTSGPSGC-----RFIPNRAAMDFEKSAHALRRSDSSSDLE-----SDGSSSMEDEYRTSLNSEILGSDD--SSSHRILSFKEKAPAPKGDTVNNLKVLYSASGYGSKNSQSSKLTTRSIPSAPSRILDAPDLLDDYYVNLLSWSDTNILAVALAQTVYLWNASSGDIQELCSFEGPENDTYVSSVSWVKEGGTHLAIGTSMGTTQLWDVQAGKRLRSMDGHTDRVGSLSWNRHILSTGGRDSIVVNHDVR 304
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A2R5GRF9_9STRA (WD repeat-containing protein slp1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRF9_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.320e-60 Identity = 123/281 (43.77%), Postives = 173/281 (61.57%), Query Frame = 1
Query: 16 VMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGA-GDYVSSVAWTKSGT-HLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
V PRW+RK L A S NR + S+ + DRFIP R +M + +++ + K+N+SS S+ + T +FNK L S++ G R+L F KAPA EGY+N KV Y+QNK++ +++P RHIPS P RILDAP+L++DYYLNL+ WG++++LAVALGQ VYLWNA G I EL A DY++SV + + G +LAVGT ET+ +D LRNM+GHS+RV +L+WN+H+++SGS D+ VHHD+R
Sbjct: 31 VEPRWKRKALA---------ARTPKSSRKRNRSGKTPSKGKSTPQHDRFIPNRGAMDLANAHFNLMKENSSS------ASNQSESPTRAEFNKALASSMGA------GDSRVLAFKKKAPAPPEGYENSLKVLYTQNKEKM-SRAQKPVRHIPSAPERILDAPDLLDDYYLNLVDWGASNMLAVALGQTVYLWNAETGGIEELCQCEAEDDYITSVKFVQEGGGYLAVGTNFSETKLFDVETCKLLRNMDGHSSRVSSLSWNQHVLSSGSRDSIIVHHDVR 289
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A0L0DAZ6_THETB (Cdc20 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DAZ6_THETB) HSP 1 Score: 205 bits (522), Expect = 3.010e-59 Identity = 121/287 (42.16%), Postives = 179/287 (62.37%), Query Frame = 1
Query: 10 TLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSEN-----ACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGAGD-YVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
T V+PRW+RK +++ Q + A+ S S +T++ +++ S + + DRFIP R++M M + + ++NN + D SG + +++ + L+ TLL R +IL F KAPA GYQN KV YSQNK A G R+ TRHIP P R+LDAP++++DYYLNLL W ++LAVALGQ VYLWNA NG ITEL + D +++S++W + G++LAVGT + Q WD A ++R M GH +RVG+LAWN+ +++SGS D+ +HD+R
Sbjct: 21 TKVIPRWKRKAMEKAQQ---SSANASTSAITASSLATTPSRGTKRRGSGTPQCDRFIPNRAAMDMSLGKFAL-QENNPTLGED---GSGAYSPAKEEYQQTLQETLLNG---RTECAKILAFKAKAPAPPVGYQNSLKVLYSQNKASA-GRKRKVTRHIPQAPERVLDAPDMLDDYYLNLLDWNKQNILAVALGQTVYLWNAENGSITELCTTEEPDNFITSLSWIEDGSYLAVGTNTADVQLWDTEASRQVRCMKGHHSRVGSLAWNQFILSSGSRDSMIFNHDVR 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15264.3478.1 >prot_H-elongata_contig15264.3478.1 ID=prot_H-elongata_contig15264.3478.1|Name=mRNA_H-elongata_contig15264.3478.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp MPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPback to top mRNA from alignment at H-elongata_contig15264:5219..6070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15264.3478.1 ID=mRNA_H-elongata_contig15264.3478.1|Name=mRNA_H-elongata_contig15264.3478.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=852bp|location=Sequence derived from alignment at H-elongata_contig15264:5219..6070+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15264:5219..6070+ >mRNA_H-elongata_contig15264.3478.1 ID=mRNA_H-elongata_contig15264.3478.1|Name=mRNA_H-elongata_contig15264.3478.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig15264:5219..6070+ (Himanthalia elongata Himel1 dioecious)back to top |