mRNA_H-elongata_contig15224.3451.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15224.3451.1
Unique NamemRNA_H-elongata_contig15224.3451.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 8.790e-107
Identity = 187/350 (53.43%), Postives = 245/350 (70.00%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLMDE-AGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPWPRFRPSRIWIPRRCASVASLD 1047
            KI+IVAWQILTQFTSVANV YP VY+ FL+ +DV NFD+SW+LSAGC   +DFH +LL  T+ P+  + FL+GT+  A   +R   E+L VI +KHVS +L + FL+YSS S+ +F+ F CE L+DG NYLRADYTI+CD  KHKA  +YA FM+++Y +GIPA YA+LLF++RHVL D  A R       S S LWKPY+PS FYYEV+ECGRR++L+G ++    ++AAQIA+TL +AF F ++SEGL+P+ SK + W+ R GH VVF SMY ALLLKVDVS E    Q  +EIVL+  H  MIL V+ E  V  +SL  +Q + P  RFR  +++   R    A  D
Sbjct:  917 KIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGKLFRSGRGLESAQDD 1266          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 4.520e-103
Identity = 187/370 (50.54%), Postives = 243/370 (65.68%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVL-MDEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPWPRFRPSRIWIPRR--------CASVASLDTDE*TQRDEIVL 1083
            KI++VAWQI+TQFTS ANV YP VYQ FLN +DV NFDISW+LSAGC + +DFH +LLL T+GPI  + FL+ T+    R +R +   L ++  +HVS +L ++FLVYS  SSVVFQTF C+ L+ G  YLRADY IECD  KH+   +YA FMILLYP+GIPAFY  LL ++R VL  D  GR D   V SIS+LW+PYRPS +YYEV+ECGRRI+L+G ++    ++AAQIA+TL +  VF V+SE L PY    + W+ R+ HAVVF S+Y ALLLKVDVSNE    Q  FE VL+  H  MIL V+ E  + G     ++ + P PR     + +           CA  +S + D+    +E  L
Sbjct:  678 KILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPRVGGDSVTMRFSYTNEMKVGCAGNSSAEDDDDDHMNEAGL 1047          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 2.280e-100
Identity = 180/338 (53.25%), Postives = 246/338 (72.78%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLMDE-AGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQ--VEAPWPRFRPSR 1005
            KI+IV+WQILTQFTSVANV YP VYQ  L+++DV NFD+SW+LSAGC V ++FHG+LL+ T+ PI  +  L+ T+  A R +R   E LN+I +KHV+ +L + F VYSS SS +F+ F C+ LD   +YLRADY+IEC+  +H+ + +YA FMI++Y +GIPA YA LLF++R VL DE   R +   V+SIS+LW+PY+P+ FYYEV+EC RR++L+G ++    ++AAQIAVTL +AF F ++SEGL+PY S+ + W+ R+GH VVF SMY ALLLKVDVS+E    Q  FE VL+  HV MIL V+ EAAV  +SL  ++  + A  PRFR  +
Sbjct: 1173 KIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGK 1510          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 5.910e-100
Identity = 181/332 (54.52%), Postives = 234/332 (70.48%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLMDE-AGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPWPRF 993
            KI++V+WQILTQFT+VANV YP VYQ FL+ + V NFD+SW+LSAGC VVVDFH +LL+ T+GPI  + FL  T+  A R +R + E L VI ++HVS +L +   VYSS SS +FQTF CE L DG  YLRADY I CD  KHKAL +YA  M+++Y +GIPA Y  LLF++R VL    A R +   V S S LWKPY+PS FYYEV+ECGRR++L+G ++    ++A QIA+TL +AF F V+SEGL+PY S+ + W+ R+GHAVVF SMY ALLLKVDVSNE  + Q  FE+VL+  H  MIL ++ E  V   +L   + + P  RF
Sbjct: 1728 KIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRF 2059          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 5.750e-99
Identity = 181/342 (52.92%), Postives = 236/342 (69.01%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLM--DEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQ------VEAPWPRFRPS 1002
            KI++VAWQI+TQFT+VANV YP VYQ+FLN ++V NFD+SW+LSAGC V VDFH +LL+ T+GPI     L  T+  A R HR + E L  +RHKHV  +L + F VYSS S+ +F+TF CE L+DG  YL ADY IECD  KHK   +YA FM+LLY  GIPA Y++LLF++R VL   + AG++      S S LWKPY+PS FYYEVVEC RR++L+G ++    +S+AQIA+TL +AF F +ISEGL+PY S+ + W+ R+GH VV +SMY ALLLKVDVS E    Q  FE VL+  HV+M++  +AE  V   +L  ++       E   PRFR S
Sbjct: 1272 KIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSS 1613          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 2.510e-98
Identity = 178/338 (52.66%), Postives = 236/338 (69.82%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLM-DEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPWP-RFRPSRI 1008
            KI+IV+WQILTQF S ANV+YP VYQ FL+ + V  FD+ W++SAGC + + FHG+LL  T+GPI  +  L+GT+  A R +R + E L +I  KHV   L + FLVYSS SS +F+TF C+ L+DG NYLR DY IECD  KHK   +YA FMILLYPLGIP  Y+ LLF++R VL  D+A R+D+  V+S S LW+PY+PS FYYEV+ECGRRI+L+G ++    ++AAQ+A+TL +AF F ++SE +SPY S+   W+ R+GH VV  SMY ALLLKVDVS+E    Q+ FE VL+T H  MIL+V+ E  V    L  +++    P RFR  + 
Sbjct: 1088 KIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWTRRLREDLPARFRRGKF 1424          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 4.850e-97
Identity = 178/338 (52.66%), Postives = 236/338 (69.82%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLM-DEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPWP-RFRPSRI 1008
            KI+IV+WQI+TQF S ANV+YP VYQ F++ + V  FD+ W+LS GC + +DFHG+LL  T+GPI  +  L+GT+  A R +R + E L +I  KHV   L + FLVYSS SS +F+TF C+ L+DGN YLR DY IECD  KHK   +YA FMILLYPLGIP  Y+ LLF++R VL  D+A RND+  V+S S LW+PY+PS FYYEV+ECGRR++L+G I+    ++AAQ+A+TL +AF F ++SE +SPY S+   W+ R+GH VV  S+Y ALLLKVDVS+E    Q+ FE VL+T H  MIL+V+ E  V    L  Q++    P RFR  + 
Sbjct: 1148 KIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWRQKLREDVPARFRRGKF 1483          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 2.130e-96
Identity = 172/320 (53.75%), Postives = 221/320 (69.06%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLM-DEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSL 957
            KI+IVAWQILTQFTSVAN+ +P VYQ FL+ +++ NFD+ W+LSAGC   VDFH +LL+ T+ PI  + FL+  +  A R    S E L  + HKHVS +L + FLVY+S S+V+FQTF CE LDD  NYLRADY IECD  KH A  +YA FMI+LY +GIPA Y   LF++  VL  DEA R     +   + LWKPYRPS FYYEV+EC RR++L+G ++    ++AAQIAV L +A VF +ISE L+PY S+ + W+CR+GHAVV  SMY ALLLKVDVS+E    Q  FE +L+  HV M+  V+ E  +   SL
Sbjct:  638 KIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISL 957          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.950e-92
Identity = 171/319 (53.61%), Postives = 219/319 (68.65%), Query Frame = 1
Query:   37 FTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVL-MDEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPWPR 990
            FTS ANV YP VYQ  LN +DV NFDISWI+SAGC + +DFH +LLL T+GPI  +  L+ T+    R +R +   L ++  +HVS +L ++F+VYSS SSVVFQTF C+ L+ G  YLRADY IECD  KH+   +YA FMILLYP+GIPAFY  LLF++R VL  D  GR D   V SIS+LW+PYRPS +YYEV+ECGRRI+L+G ++    ++AAQIA+TL +  VF V+SE L PY    + W+ R+ HAVVF S+Y ALLLKVDVSNE    Q  FE VL+  H  MIL V+ E  + G     ++ + P PR
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPR 2746          
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.260e-91
Identity = 161/328 (49.09%), Postives = 225/328 (68.60%), Query Frame = 1
Query:    1 KIIIVAWQILTQFTSVANVIYPKVYQSFLNIVDVLNFDISWILSAGCFVVVDFHGKLLLLTLGPITIIFFLSGTFNYAGRRHRTSLEALNVIRHKHVSTLLWVLFLVYSSASSVVFQTFDCEVLDDGNNYLRADYTIECDGKKHKALMIYAWFMILLYPLGIPAFYAYLLFQNRHVLMDEAGRNDALSVRSISSLWKPYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISEGLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVLITTHVIMILTVIAEAAVTGYSLHNQQVEAPW 984
            KI++V WQILTQF+ VANV YP +YQ FL+++DVLNFDI W++SAGC V  DFH  LL  T+GPI ++  L  T+  A  R+R S EA+  +  KHVS +L V FLVYSS SS VF+ F C+ L D N+YLRADY+I+C   KH+AL I+A FM+LLYP+GIP FY  LL+  R  L D + R      ++IS+LW+PY P R+Y EVVECGRR++L+G ++    +SAAQIA++L + F F VISE L+P+ S  + W+ R GH ++F +M+ ALLLKVDVS+E +  Q  F  +L+ T++++    +AE      ++  ++  +PW
Sbjct:  705 KIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKMEENGSPW 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15224.3451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI8.790e-10753.43Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI4.520e-10350.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE2.280e-10053.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G5Y7_ECTSI5.910e-10054.52Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LSC0_ECTSI5.750e-9952.92Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G2X5_ECTSI2.510e-9852.66Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K7Z1_9PHAE4.850e-9752.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z8_ECTSI2.130e-9653.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI1.950e-9253.61LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FRV1_ECTSI1.260e-9149.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15224contigH-elongata_contig15224:1567..6941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score195.3
Seed ortholog evalue2.8e-47
Seed eggNOG ortholog2880.D7G301
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons2
Model size2477
Cds size618
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15224.3451.1prot_H-elongata_contig15224.3451.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15224 4906..5523 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929900.0774295-UTR-H-elongata_contig15224:1566..16021622929900.0774295-UTR-H-elongata_contig15224:1566..1602Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15224 1567..1602 +
1691679200.578821-UTR-H-elongata_contig15224:1566..16021691679200.578821-UTR-H-elongata_contig15224:1566..1602Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15224 1567..1602 +
1622929900.0950356-UTR-H-elongata_contig15224:4500..49051622929900.0950356-UTR-H-elongata_contig15224:4500..4905Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15224 4501..4905 +
1691679200.5974357-UTR-H-elongata_contig15224:4500..49051691679200.5974357-UTR-H-elongata_contig15224:4500..4905Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15224 4501..4905 +
1622929900.1305687-UTR-H-elongata_contig15224:5523..69411622929900.1305687-UTR-H-elongata_contig15224:5523..6941Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15224 5524..6941 +
1691679200.6124492-UTR-H-elongata_contig15224:5523..69411691679200.6124492-UTR-H-elongata_contig15224:5523..6941Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15224 5524..6941 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929900.1157696-CDS-H-elongata_contig15224:4905..55231622929900.1157696-CDS-H-elongata_contig15224:4905..5523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15224 4906..5523 +
1691679200.6053016-CDS-H-elongata_contig15224:4905..55231691679200.6053016-CDS-H-elongata_contig15224:4905..5523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15224 4906..5523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15224.3451.1

>prot_H-elongata_contig15224.3451.1 ID=prot_H-elongata_contig15224.3451.1|Name=mRNA_H-elongata_contig15224.3451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MIYAWFMILLYPLGIPAFYAYLLFQNRHVLMDEAGRNDALSVRSISSLWK
PYRPSRFYYEVVECGRRIVLSGAILVADDDSAAQIAVTLNLAFVFFVISE
GLSPYESKTNDWMCRLGHAVVFSSMYYALLLKVDVSNETKKGQNAFEIVL
ITTHVIMILTVIAEAAVTGYSLHNQQVEAPWPRFRPSRIWIPRRCASVAS
LDTDE*
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mRNA from alignment at H-elongata_contig15224:1567..6941+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15224.3451.1 ID=mRNA_H-elongata_contig15224.3451.1|Name=mRNA_H-elongata_contig15224.3451.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5375bp|location=Sequence derived from alignment at H-elongata_contig15224:1567..6941+ (Himanthalia elongata Himel1 dioecious)
AAGATTATAATTGTAGCGTGGCAAATCTTGACCCAGGTAAGCTACGACGT GAGTTCTGGGAGGAAGGACGTTAAATACCTCTGAGAACACCGTGCATTTG GGGATTTCTGGGGGATGTGTAGAGCTAGTATTTCCTTTCCCCAAAAGCTC TCTACCATTCCGGTACAATCATCTGCCAATCGAGTGATATTACTATCGTA TGCTTTTGATATTGAGCGTAGTGCAACTTTTACTATATATTGTGGAATAA TAATGGCCTTAAAACAGTTTTGGAATAACAACACCCCCTGTTTTGTCCTT CGCTGCACATATATTTTCATAGCAAGACTACAGTAGACACGAAGAGCAAT ATCGCTCGTCTGAGATAATGCTACTCATTATAGAACATATTGTTAGACAC TCCATGGTGCATTATGAGCATTAATATATTTACCTTCTATTGTTGGGTAC TGCTAGAGCCAAACCATTTCATCAAAAAGAAGTAAGTCAAACTATTTGTA GAATTTTAAACCCTATGTATGTTGAGTGAACCTAAACATTGGTCGATCGT ACTTCGCAGTTATCTCAAGTCCTGTAATAACATTAGCCGTTCTGTTGTAA GCTGGCCACGATGATCCATTTTCCATTGCGTTGTAAACGTTTGTACGCCA ATATGGCTTTAGCGCACAAAATATATAGACGAAACGTTGCATGCAGTCGT TCTACGATATGCCCGCGTCCCGATAGCCACACGCTGTTCGTTAAGAACAG TATGTGTTCTCTTTTTTGTGTTTCTTTTTCTTTGGAGACGTCGCTTTTTC CGAGTATTTGTATTGTGCGCCATTCTTCCCGTTTCATTTTGTATTGAACG TTTTTCTTCTTCTGGATGTTTTTTTTCTACCTTCTGACCACGAGCTGGAT CTTGACATCAGCTTATTATGTGATAATTCAACAATTTCAAAATTCAATCA GTTGTAACTCTCTGCTAGAACTCCTCATCCCCCTTTTACGTCTATATAAA GACAGACGGAATAACATGGCTTATTTTCCGTCTCCAGTGAACATTAAGAA ACCAAACAGCTAAAAACAATAGATTCGTCAGTTCCAAACCACCAGCCACT CCGTTTGGCAACCCCCTCGCTTTAGGTTATGTTCCACCAATCTTTTCAAA TATTTTTTTCTTGCATCGTGTCCAAATCTGAGTTGTACTTGTATTCAACA GTAGTGAAGGTTGATGATCCGACTTCAGTCTGGCAGTAACCTTCCACCTG CTATCGATCCCGCTGCTTTTAAAAATACCACCGTTACCCCCCAGCACACG TATCGTGAGCGATATGTTGGAGAGGCTTTGCAATTTAAAGATTTCAGCAA AGAAAGCCTGGCACAAAAGAAACAAACACGTACAGTATGTAACCATATTT GTATCTAGGATATAATCGTCATAAACCCAGAGTTTAATATAACTCTGAAG TCTTTATAACTAGCATTTGGGGCTACCCCGCGCTTGCTTGTAGTCTGTTC TTCCGAATATCGTCTCCGTCCTGTCATTATTTTTATAATTCAATGTTTCC CCAATTGATTTCACCACAATGTTCACACCATACGCACACATATATACATT TCGGGACAAGACTATAAGTTCTTCGTGTTACTGAAGATAGAAGCGCGAAA CATCTGCCTCCGACCCTTATTAATGGGGAAGTGAGTATTACTACTACATT AGGTGTTTTGGGGTAATATTCCTCTTCGTTTTCATATATTTTTCTTCGTT TTCATATATTTTACCGCTGTATTTTCTGGAGCAATATGTCCAAAGCGTTC CATATATCACATATAGCAGAGTAAGCAAAATCTGGATTTAGTTGCTACCT ACTACTGGTGGTCAGATTAATAGGGAAATAATATTTCCTCGTCCCCATTC ATTCGCGCCTAAGACTTTTATTCTCGTGACACGGAATCGGCCATCCCGTC CGGCGTCAGTCCGCAAATAATTCTCTCAGCCCAGGCTAAATATGCTATGT ACTCGCAGAGTCATCACGATAAAGTTATTTTCCGTAACGGTGTCCTTCTC TACCGTCAACTATCATCAGGTCAATCCCGATTTCGTTACGTCACGCATAT GCGTACCGAGGGCGCTTTTCACCAAGAGACCACCGGCACTGAAGTAGTAG ATTTTAAGATTGCTTGAGTTACTTACGTGTTTGTGTGTGTAGCCTACTCA GTCAGGTAACTCGATGGACTAATTATTATATTCCTCTCTTTCACCACACT CACAGACAGTATTCACCACAAACATTTCGTCCTTTGCATTTTGTTCGATT ATTGGCTCGTCTTGCTCATCCTCTTGCTCTTCTTTTATGCCTCCGAGATA GCGAGCCCATCGCATTATTGTTCGTTCGCTCCGTACTCAACTAAATGTCA TTGGAAAGCGAGATTATATCAATATATTCCCGGACACTTCTCTGCCGAAG GTAGGAAAGCTTTAGCGCTTTCATACTACTTGTTATTGCTCAGCAGCTCT TACACTATAACGCATGTAGTTATAACTACGGCGGAAACCTTGCCTCAAGA ACCCACCCCGCTACCCTTCTTGGGATAACGAGCCTCATGATATGTGATCT TAATTGTAGTGAGGCAAACCCAGCAGAGTTCAATGTAATTTAATTTTCCC ATTCGATGTCATGTGTTCAACAACAAAAATATTGCATCCTACAAATAAAA GTCCAGAATCATTGTTTACTGTAGTATAATAGCCTACCCGTTTTATTTAG CGGATAGTCGAAGTACCTTATCACGTCTTTTAAGGGTTGGATTGATGGAC AGTTCGTCAACAGGGGTCGGTGCTGGATATAGTGTTTATTAGGCAAATCA TTATAAACTATGTCCTACATGCTACTAACACCGTTTTCGTTGACCGCTCG TCCCCGACACAACACCGGCGATTGTTCATTGAAGTTCACTTCTGTGGCTA ATGTTATATATCCTAAGGTATATCAGAGCTTCCTGAACATCGTGGACGTG CTTAATTTCGATATTTCGTGGATACTCTCTGCGGGGTGCTTTGTCGTCGT GGACTTCCACGGCAAGCTTTTACTGTTGACACTCGGGCCAATCACGATAA TATTTTTCCTGAGCGGCACCTTCAACTATGCCGGTCGCAGACATCGAACT TCACTGGAGGCCCTAAACGTTATTCGGCACAAGCACGTGTCCACACTGCT CTGGGTATTGTTTCTTGTGTACTCTAGCGCTAGCTCTGTGGTTTTTCAGA CTTTCGACTGCGAGGTCCTCGACGATGGTAACAATTACCTCCGCGCAGAT TACACAATCGAATGTGACGGGAAAAAGCACAAGGCTCTTATGATATATGC ATGGTTCATGATCCTGCTATATCCTCTTGGAATCCCTGCATTTTATGCAT ACCTTCTGTTTCAAAATCGACATGTGTTAATGGATGAAGCGGGTCGAAAC GATGCCTTGAGTGTAAGGTCTATCTCAAGCCTGTGGAAACCGTACAGACC GTCGCGGTTCTACTACGAGGTCGTTGAGTGCGGTCGGCGAATCGTTCTCT CGGGGGCAATCCTGGTTGCTGATGATGACTCTGCCGCCCAGATTGCGGTG ACACTAAACCTCGCTTTTGTCTTCTTCGTTATCTCGGAGGGCTTATCACC ATACGAATCGAAAACGAACGATTGGATGTGCCGGTTGGGACACGCTGTGG TGTTTTCTAGCATGTATTATGCTCTGTTGTTGAAAGTCGACGTTTCGAAC GAAACCAAGAAAGGCCAGAATGCGTTCGAGATTGTTCTGATCACCACCCA CGTGATAATGATTCTTACAGTGATCGCGGAAGCTGCGGTGACGGGGTACT CACTCCATAATCAACAGGTGGAAGCCCCGTGGCCAAGATTCCGGCCGTCA AGGATTTGGATACCCCGTCGGTGCGCAAGTGTGGCATCCTTAGATACCGA TGAATAGACACAACGCGATGAAATTGTACTTGCTCGAACCCAGCCAACAG AGCCATTATAATAATAGACTGAATAATTGTTTGCGGATTTGGTAGTCTTT GGACGCTAATATGGTTTCCCATGTATCTCTTCCGGCTAATGAGTGTGAGT AAGAAGGGGAAATCAAAGTGGACTTCTCGCTACTGAGTTGAACGTTTTAT CATTATGGCCCCACAGATAGATGCGATCGCTATACTGTGTCTGCTAAGAT TTCATCCTCCTTGCTGCTGGCGGTTTTGATTAAGGTTAACTTGGTGCTAA AACGTAATCCCGAGATATATTCTAAGTTTTACTTTTGATGCCATATTGGA AGTTGGTATGGAGCAAGTAGCTGGTTATCAAACTTCATTGTGATTTTTTT GTAGCAATGGATGCAGTAGGCACACTTACTTGAAGTCGGTATTCCGTCTT CAGATAATTTATTGAAGAGTAAACGTAGCTCTGTTACTCGTAGGTATTTT GACAGAGCCTCCGGTACATCATTTCGTTTTCCTTATTTGGTTTCACCAGT AGGGCTTATGTTTCCGTGTAACCTACATGGTGCACGTTTGTTTGTTTTTT CTGGGCGGAGCATTCTGCTAACAACGAGGTGATACCCTTTCTCAAGGGAC AGTTCGTCTTGATTTAGGGCTAGATATGATGAATTTCAGTCTTATTTTTT ATGAGGGGATATTAAAGGGTGAGACATGGGGTTAGCGACAAGATCTTGCG GAGCTGCGAGGTTCTAATATGGGGTCTGCAGGTGTTGGACGGGTTCTCCG CTCCCCCAAAACTTTACTCGACTAAGGCTTATGTAATATTATTTTCGGTA GTATTTTACGCCGTGGATTTATATCGCTGGACCGCATCCATGTCATAACC GAACGCAGTGGAAGGATTTGGAAATTGAACTACGTTTTTATACGGCTCTT TCGTAGTGTATAGTTTATTATGGAGTATTTATTATGCTTATGTGCTTATT TGTATTCGAGCTAAATAAGGAATTTCGTCAAAGCTAGCAATTTAGTTAGG TGGGCGAGGTGGTTACTCTTCATTGCAGAGAATAATTTCATGTAGCAGTA CGCAAGAAATTCCCTGTGCATTTCATTTTTCGTATCCTTATGTAATATAT ATACTCTGTGTAGAAGTAGAGTTTTGTTTTAATATTTTTCTTAAAAAAAC AACCTTGGGCTCATTCCAATCCCCCGAGACATCCACGCGTTCTTAGCATC GTAATAGGTGAAGTCTAGGGGACCCATAATCGTCAGGGTTAATACTGTAC ATGAGTACGAGGTGTGAGCACAAAATCGTCACGTATGATTAATCGTGTTC CCCAATAATATACTTATTGGGTAGACCTTTTTAGTTTTGCCCTCTTGGTA CTGTCTTTGTTACCTTGTTTGTACG
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Coding sequence (CDS) from alignment at H-elongata_contig15224:1567..6941+

>mRNA_H-elongata_contig15224.3451.1 ID=mRNA_H-elongata_contig15224.3451.1|Name=mRNA_H-elongata_contig15224.3451.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig15224:1567..6941+ (Himanthalia elongata Himel1 dioecious)
ATGATATATGCATGGTTCATGATCCTGCTATATCCTCTTGGAATCCCTGC
ATTTTATGCATACCTTCTGTTTCAAAATCGACATGTGTTAATGGATGAAG
CGGGTCGAAACGATGCCTTGAGTGTAAGGTCTATCTCAAGCCTGTGGAAA
CCGTACAGACCGTCGCGGTTCTACTACGAGGTCGTTGAGTGCGGTCGGCG
AATCGTTCTCTCGGGGGCAATCCTGGTTGCTGATGATGACTCTGCCGCCC
AGATTGCGGTGACACTAAACCTCGCTTTTGTCTTCTTCGTTATCTCGGAG
GGCTTATCACCATACGAATCGAAAACGAACGATTGGATGTGCCGGTTGGG
ACACGCTGTGGTGTTTTCTAGCATGTATTATGCTCTGTTGTTGAAAGTCG
ACGTTTCGAACGAAACCAAGAAAGGCCAGAATGCGTTCGAGATTGTTCTG
ATCACCACCCACGTGATAATGATTCTTACAGTGATCGCGGAAGCTGCGGT
GACGGGGTACTCACTCCATAATCAACAGGTGGAAGCCCCGTGGCCAAGAT
TCCGGCCGTCAAGGATTTGGATACCCCGTCGGTGCGCAAGTGTGGCATCC
TTAGATACCGATGAATAGATGATATATGCATGGTTCATGATCCTGCTATA
TCCTCTTGGAATCCCTGCATTTTATGCATACCTTCTGTTTCAAAATCGAC
ATGTGTTAATGGATGAAGCGGGTCGAAACGATGCCTTGAGTGTAAGGTCT
ATCTCAAGCCTGTGGAAACCGTACAGACCGTCGCGGTTCTACTACGAGGT
CGTTGAGTGCGGTCGGCGAATCGTTCTCTCGGGGGCAATCCTGGTTGCTG
ATGATGACTCTGCCGCCCAGATTGCGGTGACACTAAACCTCGCTTTTGTC
TTCTTCGTTATCTCGGAGGGCTTATCACCATACGAATCGAAAACGAACGA
TTGGATGTGCCGGTTGGGACACGCTGTGGTGTTTTCTAGCATGTATTATG
CTCTGTTGTTGAAAGTCGACGTTTCGAACGAAACCAAGAAAGGCCAGAAT
GCGTTCGAGATTGTTCTGATCACCACCCACGTGATAATGATTCTTACAGT
GATCGCGGAAGCTGCGGTGACGGGGTACTCACTCCATAATCAACAGGTGG
AAGCCCCGTGGCCAAGATTCCGGCCGTCAAGGATTTGGATACCCCGTCGG
TGCGCAAGTGTGGCATCCTTAGATACCGATGAATAG
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