mRNA_H-elongata_contig15175.3424.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15175.3424.1
Unique NamemRNA_H-elongata_contig15175.3424.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 6.880e-65
Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASI--DESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 444
            QMDWLSKR  EAT  S RY WHQQPAA VLA+F GKGEGEDGVGFV  AS   DE++ + +G+VLD +SFYAEGGGQIYD G+LS  DGSGS AV+QV++FGAY LHIG+V AGT+SVGS V+C+VDYERRA VAPNHTMTHVLNFALRK
Sbjct:  499 QMDWLSKRDTEATEASGRYTWHQQPAAKVLALFVGKGEGEDGVGFVPSASAVADEADQQTVGVVLDCTSFYAEGGGQIYDIGELSLSDGSGSFAVRQVSSFGAYTLHIGQVKAGTLSVGSDVVCKVDYERRANVAPNHTMTHVLNFALRK 648          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 3.250e-49
Identity = 93/131 (70.99%), Postives = 107/131 (81.68%), Query Frame = 1
Query:   76 AALVLAVFGGKGEGEDGVGFVSCAS--IDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIG------EVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 444
            A  VLA+F GKGEGEDGVGFV  AS  +DE++ + +G+VLD +SFYAEGGGQIYD G+LS  DGSGS AV+QV+NFGAY LHIG      EV AGT+SVGS V+C+VDYERRA VAPNHTMTHVLNFALRK
Sbjct:  386 AEQVLALFVGKGEGEDGVGFVPSASAVVDEADQQTVGVVLDCTSFYAEGGGQIYDIGELSLSDGSGSFAVRQVSNFGAYTLHIGQYYGAVEVKAGTLSVGSDVVCKVDYERRANVAPNHTMTHVLNFALRK 516          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7R9WDE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDE1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 8.500e-40
Identity = 71/153 (46.41%), Postives = 100/153 (65.36%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPAALVL-AVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKARTT 456
            Q  +L   G++ T    +Y+W+++       A+F G+GE EDG+GFV   S D     ++G+VLD++SFYAE GGQIYDTG +    G  ++ +  V ++G +VLH+GEVT GT+ +G  V C VDY RR+ VA NHTMTH+LNFAL+ A  T
Sbjct:    5 QTAYLVNDGVKGTDDEAKYVWNEELGGCTAKALFVGRGETEDGIGFVDTISADSG---SVGLVLDKTSFYAEAGGQIYDTGIIKSTAGGCTIKIDNVQSYGQFVLHVGEVTQGTLKLGEEVTCGVDYGRRSPVASNHTMTHILNFALKDALIT 154          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: W7TIB5_9STRA (Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIB5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.400e-38
Identity = 70/148 (47.30%), Postives = 102/148 (68.92%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 444
            Q  WL  RG+E T +S +Y+WH +P+A V+A++ GK      VGFV   + ++     + ++L+ +SFYAE GGQI+DTG ++  DG+ ++ V  V ++G YVLHIG + +G + VG    C VDYERRA++APNHTMTHVLN+ALR+
Sbjct:  505 QTAWLQSRGVEITDSSLKYVWHHEPSARVMALYKGKA-----VGFVEEVTAEDGV---VAVILNTTSFYAEQGGQIHDTGVITNLDGTDTLRVDSVQSYGGYVLHIGPLESGALRVGDTATCMVDYERRARIAPNHTMTHVLNYALRR 644          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A6V2C2S3_9STRA (Alanine--tRNA ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2C2S3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 8.820e-37
Identity = 72/153 (47.06%), Postives = 103/153 (67.32%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPAAL-VLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKARTT 456
            Q  +L+ + + ATV  D+Y+W Q+ +      +F G+GE EDG+GFV   S   SE   +G+VLD++SFYAE GGQ+ D+G L+   G+ ++ V  V  +G + LH+GEVT+GT+S+G  V CQVDY+RR  +A NHTMTHVLN+AL+    T
Sbjct:  492 QTSFLAGKEVPATVDDDKYVWDQELSGCKACGLFIGRGETEDGIGFVDSIS---SESGGVGIVLDKTSFYAEAGGQVADSGTLTTSSGA-TIRVDNVQMYGMFALHLGEVTSGTLSLGDEVTCQVDYQRRKPIASNHTMTHVLNYALQDVLVT 640          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7S1ZG71_TRICV (Alanine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG71_TRICV)

HSP 1 Score: 142 bits (358), Expect = 2.250e-36
Identity = 76/149 (51.01%), Postives = 102/149 (68.46%), Query Frame = 1
Query:   13 LSKRGIEATVTSDRYIWHQQPAALVL-AVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKARTT 456
            L   G+EAT    +Y+W+Q+       A+F G+GE EDGVGFV   SI+ +E   +G+VLD+++FYAE GGQIYDTG +    G G V V  V  +G +VLHIGEVT GT+++G  ++C VDY+RR+ +A NHTMTHVLNFAL+    T
Sbjct:  558 LVSDGVEATDDEAKYMWNQELGGCAAKALFVGRGETEDGVGFVP--SIN-AESGMVGLVLDKTAFYAEAGGQIYDTGSIK-TSGGGVVRVDNVQAYGQFVLHIGEVTEGTVNLGDELICCVDYKRRSPIAANHTMTHVLNFALKDVLVT 702          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7R9U5A7_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5A7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.910e-36
Identity = 73/150 (48.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTN---FGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALR 441
            Q  WL+ +G   + T  +Y W+  P   V A F G+G G+DG+GF    S  +     +G+VLD +SFYAE GGQI+DTG +    G+ + A+ +V +   FG+YVLHIG V  G  + GSRV C VDY RR +VAPNHTMTHVLN+ALR
Sbjct:  574 QTSWLANQGFGPSETRGKYNWNSTPTVTVQACFLGRGLGKDGIGFADSVSPGDEV---VGLVLDSTSFYAEAGGQIFDTGVIRGASGAEANAIMRVESVQVFGSYVLHIGVVEMGAFTPGSRVTCMVDYARRERVAPNHTMTHVLNYALR 720          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7S4GJP2_9EUGL (Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJP2_9EUGL)

HSP 1 Score: 141 bits (355), Expect = 5.710e-36
Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 1
Query:   13 LSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALR 441
            L + G+E T   D+Y WH  P+A V A+F G GEGE G+GFV  A         +G+VLD S FY E GGQ+ DTG+L    G G++ V+    +G +VLH G V  G + VG  V C VDYERRA VAPNHTMTHVLN ALR
Sbjct:  555 LQQTGVEVTDAGDKYNWHVTPSATVKALFIGVGEGEGGLGFVDVADASTGP---VGVVLDASPFYPEAGGQVADTGRLQ---GPGTMHVENTQIYGGFVLHTGSVPTGELRVGDAVQCAVDYERRAHVAPNHTMTHVLNHALR 691          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A8J9T9Q1_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T9Q1_PHATR)

HSP 1 Score: 138 bits (348), Expect = 3.080e-35
Identity = 74/149 (49.66%), Postives = 99/149 (66.44%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPA-ALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 444
            Q  +L  + I AT  + +Y+WH++ A  +V A F G+ E ED +GFV   S + S    +G+VLD+SSFYAE GGQ+YD G L+   G+  V +  V  +G +VLH+GEV +GT+SVG  V C VDY RRA +A NHTMTHVLN ALR+
Sbjct:  286 QTSYLVGQNISATDDAAKYVWHEELADCVVKACFIGRNETEDMIGFVDSISPESSA---VGIVLDKSSFYAEAGGQVYDVGTLTSSTGA-VVKITNVQAYGQFVLHLGEVASGTLSVGDTVKCSVDYVRRAPIASNHTMTHVLNHALRE 430          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: B7G5M3_PHATC (Alanine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5M3_PHATC)

HSP 1 Score: 138 bits (348), Expect = 4.940e-35
Identity = 74/149 (49.66%), Postives = 99/149 (66.44%), Query Frame = 1
Query:    1 QMDWLSKRGIEATVTSDRYIWHQQPA-ALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 444
            Q  +L  + I AT  + +Y+WH++ A  +V A F G+ E ED +GFV   S + S    +G+VLD+SSFYAE GGQ+YD G L+   G+  V +  V  +G +VLH+GEV +GT+SVG  V C VDY RRA +A NHTMTHVLN ALR+
Sbjct:  482 QTSYLVGQNISATDDAAKYVWHEELADCVVKACFIGRNETEDMIGFVGSISPESSA---VGIVLDKSSFYAEAGGQVYDVGTLTSSTGA-VVKITNVQAYGQFVLHLGEVASGTLSVGDTVKCSVDYVRRAPIASNHTMTHVLNHALRE 626          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP9_ECTSI6.880e-6574.00Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L0C8_9PHAE3.250e-4970.99Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A7R9WDE1_9STRA8.500e-4046.41Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
W7TIB5_9STRA7.400e-3847.30Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A6V2C2S3_9STRA8.820e-3747.06Alanine--tRNA ligase n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1ZG71_TRICV2.250e-3651.01Alanine--tRNA ligase n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9U5A7_9STRA2.910e-3648.67Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4GJP2_9EUGL5.710e-3651.75Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnasti... [more]
A0A8J9T9Q1_PHATR3.080e-3549.66Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B7G5M3_PHATC4.940e-3549.66Alanine--tRNA ligase n=1 Tax=Phaeodactylum tricorn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15175contigH-elongata_contig15175:4979..6804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score134.8
Seed ortholog evalue3.4e-29
Seed eggNOG ortholog2850.Phatr47999
KEGG rclassRC00055,RC00523
KEGG koko:K01872
KEGG ReactionR03038
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
EggNOG free text desc.Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
EggNOG OGs2XACW@2836,COG0013@1,KOG0188@2759
EC6.1.1.7
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categoryother localisation
Exons4
Model size459
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15175.3424.1prot_H-elongata_contig15175.3424.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15175 4979..6801 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929897.494112-CDS-H-elongata_contig15175:4978..51131622929897.494112-CDS-H-elongata_contig15175:4978..5113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 4979..5113 -
1691679199.6458545-CDS-H-elongata_contig15175:4978..51131691679199.6458545-CDS-H-elongata_contig15175:4978..5113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 4979..5113 -
1622929897.508149-CDS-H-elongata_contig15175:5458..55571622929897.508149-CDS-H-elongata_contig15175:5458..5557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 5459..5557 -
1691679199.6589537-CDS-H-elongata_contig15175:5458..55571691679199.6589537-CDS-H-elongata_contig15175:5458..5557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 5459..5557 -
1622929897.521236-CDS-H-elongata_contig15175:6222..63631622929897.521236-CDS-H-elongata_contig15175:6222..6363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 6223..6363 -
1691679199.6688526-CDS-H-elongata_contig15175:6222..63631691679199.6688526-CDS-H-elongata_contig15175:6222..6363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 6223..6363 -
1622929897.5349984-CDS-H-elongata_contig15175:6720..68011622929897.5349984-CDS-H-elongata_contig15175:6720..6801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 6721..6801 -
1691679199.6777432-CDS-H-elongata_contig15175:6720..68011691679199.6777432-CDS-H-elongata_contig15175:6720..6801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15175 6721..6801 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929897.5472057-UTR-H-elongata_contig15175:6801..68041622929897.5472057-UTR-H-elongata_contig15175:6801..6804Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15175 6802..6804 -
1691679199.6871433-UTR-H-elongata_contig15175:6801..68041691679199.6871433-UTR-H-elongata_contig15175:6801..6804Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15175 6802..6804 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15175.3424.1

>prot_H-elongata_contig15175.3424.1 ID=prot_H-elongata_contig15175.3424.1|Name=mRNA_H-elongata_contig15175.3424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MDWLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASI
DESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGA
YVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKART
T*
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mRNA from alignment at H-elongata_contig15175:4979..6804-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15175.3424.1 ID=mRNA_H-elongata_contig15175.3424.1|Name=mRNA_H-elongata_contig15175.3424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1826bp|location=Sequence derived from alignment at H-elongata_contig15175:4979..6804- (Himanthalia elongata Himel1 dioecious)
CAGATGGACTGGCTGTCTAAGAGGGGCATCGAGGCGACTGTTACTTCTGA CCGCTACATTTGGCACCAGCAGCCCGCCGCTCTGGTGAATACGCCCCAGA ACAGCAGCAATGCCATTGCGTAGATAACGTAGGCACCTTATACGCCATAG ATGATCTAGATGCCACACATATCGTTAGTAATGGAATACGATAACACATT GTAGCATATTATGTTCGATCGAGACCTTAGGGGGTTTGTTGTTCCCATAG CGTAGCATGCAGCTGCCGTACTTTGACGCGAGCTTGTCAAGTATTCGGTG TGTACTGAACCAGAGACTTGCCTCAGCGAAAGCAAGGGACTGTCATTTTA GAGGGGGATATGCTAACAAGGACACTATTAATACCCCGATCTAACCTTCA ACGTTAACGTTTACACCTTCCCTTCCCTTTGAGACTGTAAGGTACTGGCA GTGTTCGGCGGCAAGGGGGAGGGAGAGGACGGGGTAGGGTTCGTGTCTTG TGCATCTATCGACGAGTCCGAGCCGAAAAACATCGGTATGGTGCTGGACA GGAGCAGTTTTTACGCCGAAGGAGGCGGCCAGGTGCCGTTGCCGTCCGAA TCGTTAGCCTGTCTAGATCAGCAGCCTATCATGAGAGCAATGCGTTGTCT TCGTCTTCATCGCGGAAACCTATAGTATTACTATTATTAGTGGTTCTATA GTATTACTAGTATTAGTGGCTCTATAGTATTACTAGTATTAGTGGATCTA TAGTATTACTAATAGTATTATTATAATGTTCTTATTTGTAAAAGTAGCAG TCGGGAGGCAATAACTTTTATAACTTTTCATGGTTATTATTCCATCTTTA TATTAATAGAAATTGGCAATCTTTATAATATTGTATTAATAGTGTAATAG CCCATCGTTTCATCTATTGCTTAAATACATATCTTCACATTTCTTCATAA ATTGATTATGTCGTGTATTAGGCATCGTCTCAAGTTCGCCGAGCGCCCCG GTCGATGCATTATGCCTGTCAACGCTTTCAGAACTACTTTATTTTCCGTC TTGGGTGTGATCTGATGAAGATGATCTATCGCCTTCCTAGAGTTTTCGTG TAATCGTGGAGGCGTTTTTTTTCAGGGGTTCGTAGTGGCTTATTTAATAC CCCCCCCCGTATCCCCTCTTCTCTAGTATAATCCCTTTCGTCAAAATAAC TTTTTATTTATAAATAACTTTTATTGTTTCTTTGCTTCGGGCTTTAGATC TATGACACTGGCAAACTTTCCTTCGAGGACGGTTCAGGATCAGTTGCGGT CAAGCAGGTGACCAACTTCGGGGCGTACGTTCTGCACATTGGTGAGGTGA GATCTTCACAAAAAGAAGTGTTACTGTACGGTGTACAGTATATTTTAAGG ATATATAATTAATGCTGCAATTATTGGCCATTCACGCTTGTGACTGGCAG CATTAATAGCGTGCTGCTGGGAGGCCATACCGCGTAAGTCCGCTCAACGT TGAGATTTACTGCAATTAATGTAACAGTTACAGCGTCGCCTTGAGCTCAG GCCCTCAAGATTGTCCAGCACTGCAATACCACAATGTATGATTCATGTTC AACGACGTTGCTATCTTCATGGCGACCAGATGATCTCCCAGCCCACTCTC TTGCGTCGCCATTATATTCAATAATTGCATACACATGACAGGTTACCGCT GGCACCATATCCGTGGGTTCTCGAGTCTTGTGCCAAGTGGATTACGAGAG ACGTGCCAAAGTTGCGCCCAATCATACCATGACTCACGTCTTGAACTTCG CTCTCCGAAAGGCGCGTACTACATAA
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Coding sequence (CDS) from alignment at H-elongata_contig15175:4979..6804-

>mRNA_H-elongata_contig15175.3424.1 ID=mRNA_H-elongata_contig15175.3424.1|Name=mRNA_H-elongata_contig15175.3424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig15175:4979..6804- (Himanthalia elongata Himel1 dioecious)
ATGGACTGGCTGTCTAAGAGGGGCATCGAGGCGACTGTTACTTCTGACCG
CTACATTTGGCACCAGCAGCCCGCCGCTCTGATGGACTGGCTGTCTAAGA
GGGGCATCGAGGCGACTGTTACTTCTGACCGCTACATTTGGCACCAGCAG
CCCGCCGCTCTGGTACTGGCAGTGTTCGGCGGCAAGGGGGAGGGAGAGGA
CGGGGTAGGGTTCGTGTCTTGTGCATCTATCGACGAGTCCGAGCCGAAAA
ACATCGGTATGGTGCTGGACAGGAGCAGTTTTTACGCCGAAGGAGGCGGC
CAGGTACTGGCAGTGTTCGGCGGCAAGGGGGAGGGAGAGGACGGGGTAGG
GTTCGTGTCTTGTGCATCTATCGACGAGTCCGAGCCGAAAAACATCGGTA
TGGTGCTGGACAGGAGCAGTTTTTACGCCGAAGGAGGCGGCCAGATCTAT
GACACTGGCAAACTTTCCTTCGAGGACGGTTCAGGATCAGTTGCGGTCAA
GCAGGTGACCAACTTCGGGGCGTACGTTCTGCACATTGGTGAGATCTATG
ACACTGGCAAACTTTCCTTCGAGGACGGTTCAGGATCAGTTGCGGTCAAG
CAGGTGACCAACTTCGGGGCGTACGTTCTGCACATTGGTGAGGTTACCGC
TGGCACCATATCCGTGGGTTCTCGAGTCTTGTGCCAAGTGGATTACGAGA
GACGTGCCAAAGTTGCGCCCAATCATACCATGACTCACGTCTTGAACTTC
GCTCTCCGAAAGGCGCGTACTACATAAGTTACCGCTGGCACCATATCCGT
GGGTTCTCGAGTCTTGTGCCAAGTGGATTACGAGAGACGTGCCAAAGTTG
CGCCCAATCATACCATGACTCACGTCTTGAACTTCGCTCTCCGAAAGGCG
CGTACTACATAA
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