mRNA_H-elongata_contig1510.3388.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1510.3388.1
Unique NamemRNA_H-elongata_contig1510.3388.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: D7FQR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR8_ECTSI)

HSP 1 Score: 654 bits (1686), Expect = 1.460e-227
Identity = 366/611 (59.90%), Postives = 443/611 (72.50%), Query Frame = 1
Query:    1 QEEIRQKVVMTGDKEKAVSELEAGRRTIVRDEDDPEMEANLLDGLMVSRVDDFEEELRAAYMPADSELRGRGGGKKFDGGFASTIEGAEAFFNKPSPFQKAARYKAQEEATTG------------STAGIDLAADAIDGAETAVEAAGEVMAEASGRLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWTSKFQQARLMSGDKEKKYDAVYFDKDLDGRPKASSVFAVEDAKEVLMFASKYRGGVSSSRIINAFEFLKKRSEEAVLAAKREAAALKREEAQLPPASTRQPTIDETPDGGDNEAANENLEGKSLELKRRRPPWERKTESAFPKGGAGLMSLMGDASSLEQRVQGGWNLVIKAGGSKVEVLRRDSSLVLSPGGSATAVEPAGPL-SVAKEGQWEMDANDRMVKLDFKSSKWVGLVDLGGGQENLEVLALDDKLLVASES 1794
            Q+++R  +V+ GDK+KAVSELEAGRRTIVRD DDP  EAN+LD LMVSR +D E+ELRAAY    S     G   KFDG + ST++GAEAFFNKPSPFQKAA YK +  A +              T+      DA++ AETA E  G V+ ++  ++TGSVGGRWEK KEG +VDTHKPVVSTWGVFERPKD+SKAFGGGRDPTL++ DPEE +RR+E T+A+L SYRG +  DL++E+ +E +IK ALA SKRAMKFGDTFGAVSALE +KQ+CS +GPLGAVVFLELAMALE TGRSYQAQDIYKVL+RSKNRE+++QAKRLNEGLEAMDML  GR          +KMWT+ F     MSGD+EKKY  VY++KD DGRP    VFAVEDAK+VL FASKY+GG+S +RII AF+FLK+RSEEA LAA+                                         + +    ++ PWE+  ES  P+GGAGL+SLMGD S+LE+R+QGGW L IKAGGS V+VL+RDS  VL+PGG  TAVEP+GPL SV KEG+W++DA++R++KLDF SSKW GLV+ GG QE LEVLALDDKLLVA ES
Sbjct:   17 QDKLRDNLVVKGDKDKAVSELEAGRRTIVRDPDDPMQEANILDDLMVSRDEDLEDELRAAYAAGSSSDVAAGEKPKFDGAYGSTMQGAEAFFNKPSPFQKAAEYKEESAAASAXXXXXXXXXXXAGTSADARVLDAVESAETAAETTGTVIEDSFEKVTGSVGGRWEKPKEGADVDTHKPVVSTWGVFERPKDMSKAFGGGRDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDLKREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEAMDMLKFGRVXXXXXXXXXTKMWTASF---TPMSGDQEKKYSQVYYEKDADGRPSEDGVFAVEDAKQVLTFASKYKGGISKNRIIAAFDFLKQRSEEASLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEM-FALKKTPWEKNAESTLPQGGAGLVSLMGDMSNLEERIQGGWKLTIKAGGSSVDVLQRDSPFVLNPGGKLTAVEPSGPLLSVTKEGEWKLDADNRVIKLDFASSKWAGLVNTGGAQEGLEVLALDDKLLVALES 623          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A6H5JWJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ1_9PHAE)

HSP 1 Score: 601 bits (1550), Expect = 2.920e-206
Identity = 339/580 (58.45%), Postives = 413/580 (71.21%), Query Frame = 1
Query:    1 QEEIRQKVVMTGDKEKAVSELEAGRRTIVRDEDDPEMEANLLDGLMVSRVDDFEEELRAAYMPADSELRGRGGGKKFDGGFASTIEGAEAFFNKPSPFQKAARYKAQEEATT------------GSTAGIDLAADAIDGAETAVEAAGEVMAEASGRLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWTSKFQQARLMSGDKEKKYDAVYFDKDLDGRPKASSVFAVEDAKEVLMFASKYRGGVSSSRIINAFEFLKKRSEEAVLAAKREAAALKREEAQLPPASTRQPTIDETPDGGDNEAANENLEGKSLE--LKRRRPPWERKTESAFPKGGAGLMSLMGDASSLEQRVQGGWNLVIKAGGSKVEVLRRDSSLVLSPGGSATAVEPAGPL-SVAKEGQWEMDANDRMVKLDF 1695
            Q+++R  +V+ GDK+KAVSELEAGRRTIVRD DDP  EAN+LD LMVSR +D E+ELRAAY    S     G   KFDG + ST++GAEAFFNKPSPFQKAA+YK +  A                T+      + ++ AE A E  G V+ ++  ++TGSVGGRWEK KEG +VDTHKP VSTWGVFERPKD+SKAFGGGRDPTL++ DPEE +RR+E T+A+L SYRG +  DL++E+ +E +IK ALA SKRAMKFGDTFGAVSALE +KQ+CS +GPLGAVVFLELAMALE TGRSYQAQDIYKVL+RSKNRE+++QAKRLNEGLEAMDML  GR           KMWT+ F     MSGD+EKKY  VY++KD DGRP    VFAVEDAK+VL FASKY+GG+S +RII AF+FLK+RSEEA LAA+                                         K+ E     ++ PWE+ TES  P+GGAGL+SLMGD S LE+R+QGGW L IKAGGS V+VL+RDS  VL+PGG  TAVEP+GPL SV KEG+W++DA++R++KLDF
Sbjct:  119 QDKLRANLVVKGDKDKAVSELEAGRRTIVRDPDDPMQEANILDDLMVSREEDLEDELRAAYAAGSSSDVAAGKKPKFDGAYGSTMQGAEAFFNKPSPFQKAAKYKEESAAAXXXXXXXXXXXXXAGTSADARVLEVVESAEAATETTGTVIEDSFEKVTGSVGGRWEKPKEGADVDTHKPAVSTWGVFERPKDMSKAFGGGRDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDLKREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEAMDMLKFGRVXXXXXXXXXXKMWTASF---TPMSGDQEKKYSQVYYEKDADGRPSEDGVFAVEDAKQVLTFASKYKGGISKNRIIAAFDFLKQRSEEASLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEEELFALKKTPWEKNTESTLPQGGAGLVSLMGDMSKLEERIQGGWKLTIKAGGSSVDVLQRDSPFVLNPGGKLTAVEPSGPLLSVTKEGEWKLDADNRVIKLDF 695          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S2YC46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC46_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.480e-29
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 1
Query:  433 RLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDML 969
            + T  +GG W++ +   E + +KP   +WG F RP+DISKA+GGGR      ++ E   + +E+T   L+ YR     D+E E+ +  +I+EAL +   AM+ G    AVSALE + + CSTN  +G  VFLELAMA E  GR+ +A  +Y VL RS+  +++  AKRL  G+EAM  +
Sbjct:   27 KTTSGIGGSWKRNETAPE-EMYKPKTGSWGAFPRPRDISKAYGGGRRVGPGYSNEEAKLKSQESTRERLKKYREKVGIDVESEKEHADEIEEALKIGSLAMQRGMYSTAVSALEKVTKHCSTNSKVGGKVFLELAMAYEAVGRTPEAIKVYSVLSRSRMEDIKFDAKRLLYGIEAMQFM 204          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S3KWU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWU3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.650e-29
Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  406 GEVMAEASGRLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDML 969
            GE+ +E   +LT  VGG+W K +  VE D +KP   +WG F RP+DISKA+GGGR      +D E   +  E T   L+ YR     +++ E+ +  +I +AL ++  AM+ G    AVSALE + Q CSTN  +G  VFLELAMA E  GR+ +A  +Y  L RS+  +V+  AKRL  GLEAM  +
Sbjct:  258 GEITSEK--QLTSGVGGKWSKNETAVEEDVYKPKSGSWGAFPRPRDISKAYGGGRRIGPGFSDEEARLKSTEETRERLKRYREKMGIEVQSEKEHADEINQALEIAALAMRRGVYSTAVSALEKVTQWCSTNSKIGGKVFLELAMAYEAVGRTQEAITVYSTLSRSRMEDVKFNAKRLLYGLEAMQFM 443          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S0PVG5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PVG5_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 9.290e-27
Identity = 81/204 (39.71%), Postives = 115/204 (56.37%), Query Frame = 1
Query:  421 EASGRLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTL--RKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWT 1026
            EAS R T SVGGRW    E V+ D HKP VSTWGVFERP DIS+ FGGG+   +   +   EE  R+ + TE  L++YR     DLE ER + ++IK A A + + ++FG+   A+  LE +K  C  N  LG    +EL +  +  GRS +A  I+  L+RS   +VR  A+++    EA   L +       E ++I+K+ T
Sbjct:  109 EASKR-TSSVGGRWSPPSEVVKADVHKPKVSTWGVFERPADISRTFGGGKRIGVGGNQVSDEERARKNKETEERLKAYRASQGGDLELEREHTEEIKAARAEAFQLVRFGELRAAIEQLEQVKDYCCYNTELGGQALIELGVNYDANGRSDEASQIFGRLQRSPVVKVRKVAQQMLFQKEARSFLKVNEEDAAAEWAKIAKIRT 311          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S4D540_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D540_HETAK)

HSP 1 Score: 124 bits (310), Expect = 1.160e-26
Identity = 91/259 (35.14%), Postives = 142/259 (54.83%), Query Frame = 1
Query:  484 EVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLR--KTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVL-KRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWTSKFQQARLMSGDKEKKYDAVYF-DKDLDGRPKASS-VFAVEDAKEVLMFASKYRGGVSSSRIINAFEFLKKRSEE 1245
            E +T KP VSTWGVFERPKDISKA+GGGR   +   +   EE +RR+E T  LL      S A+ E E  + ++I  A+   KR ++FGD +GA+  LE ++   +     G    LEL M LE   R  +A  +Y +L  +S+  +++  AK L+ G+ A++ +N        + +E    W   F + +      + +Y + Y  D+D DG P +++   +V  A+  L+   KYR G+S+ RI+ A +FL+ RS+E
Sbjct:    5 EQETLKPKVSTWGVFERPKDISKAYGGGRRIGVGGFQMSAEERQRRDEETRRLLEEALQGSTAERELEEEHAEEIDAAMGRVKRLLQFGDRWGALEELEGVRPWLNPKSERGGRALLELGMVLESAKRQQEAVQVYNLLYSKSRIGDIKKNAKALSAGIAAINDMNF-------KTAEYESQWIWDFPEIQT-----DNRYASGYVQDRDADGVPASTNEAKSVTSARFTLLNVFKYRKGISAQRIVKALKFLQSRSDE 251          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S3V4N3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4N3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.110e-25
Identity = 133/481 (27.65%), Postives = 217/481 (45.11%), Query Frame = 1
Query:  433 RLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGR----DPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWTSKFQQARLMSG---DKEKKYDAVYFDKDLDG----RPKASSVFAVEDAKEVLMFASKYRGGVSSSRIINAFEFLKKRSEEAVLAAKREAAALKREEAQLPPASTRQPTIDETPDGGDNEAANENLEGKSLELKRRRPPWERKTESAFPKGGAGLMSL-MGDASSLEQRVQGGWNLVIKAG--GSKVEVLRRDSSLVLSPGGSAT--AVEPAGPLSVAKEGQWEMDANDRMVK-------------LDFKSSKWVGLVDLGGGQENL--EVLALDDKLLV 1782
            + T  +GG W K  E    ++++P    WG F RPKDISKA+GGG+    D      D    ++  E T   LR YR     +++ E+ +  +I EAL +++RAM+ G    A S+LE + Q CSTN  +G  VFLELAMA E  GRS +A  IY  L   +   ++  AKRL  G+EAM  +      E + +S   K  T  F +   +     + + KY+  Y D D  G    +   S V ++ +A+++++ A+   G V  ++I+ A   + +   +A+      A  +K+ E    P +                     + GK +E K        K ++    G AGL S+ +GD + + + + G W L + A   G  V    +  S            A  P+G LSV++ G + +D   R++               D  S++  G V       NL  +++++D +LL+
Sbjct:  230 KTTTGIGGAWAK-NETSPGESYRPANGGWGYFPRPKDISKAYGGGKRIGADIVTTMEDERRKEKAVEDTREKLRRYREKVGIEVQSEKDHAAEIAEALELAQRAMQRGIYGTATSSLEKVTQYCSTNSEVGGQVFLELAMAYEAVGRSGEAIQIYTTLSTCRMETIKFNAKRLLYGIEAMQFMRE----EAKVKSFSKKRATETFIETTGLGNIADNFDDKYNTAYIDLDRRGGFYKKLTESVVRSIREARQIILAATN-SGEVDRTKIVQALRSIDRSFSDAL------AKEMKKNEPDPEPLAM--------------------MNGKPIERK--------KDDNELIAGIAGLESINLGDMNQVLENLSGEWKLQLMADSKGDGVNFFNKTISWQSFDAEEKNYKAFSPSGFLSVSQTGSFAIDDIKRVISRSEVSKEGSAAFFTDLYSTRLTGAV----AAVNLPQQIISIDSELLI 666          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S2A140_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A140_TRICV)

HSP 1 Score: 119 bits (298), Expect = 9.210e-25
Identity = 92/276 (33.33%), Postives = 145/276 (52.54%), Query Frame = 1
Query:  439 TGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWTSKFQQA---RLMSGDKEKKYDAVYFDKDLDGRPKA--SSVFAVEDAKEVLMFASKYRGGVSSSRIINAFEFLKKRSEEAV 1251
            T  +GG W   +   E  T +P   +WG FERP DISKA+GGGR     K D    ++  E T A L+ YR     +++ E+ + ++I+ AL ++ RAM+ G    AVSALE + + CSTN  +G  VFLELAMA E  GR+ +A  +Y  L   +  E++  AKRL  G+EAM+ +      E + ++   K     F  A   R  + + + +Y+  + D D     +   S V  V +A+++LM A+   G V   +++ A   + +  +EA+
Sbjct:  148 TTGIGGSWTANRTATET-TRRPSRGSWGYFERPNDISKAYGGGRRIDPGKVDKAAMEKSVEDTRARLQRYREKVGIEVQSEKDHAEEIETALGIASRAMERGVYGTAVSALEKVTKHCSTNSKVGGRVFLELAMAYEAVGRTPEAVRVYTALSTCRIEEIKHNAKRLLYGVEAMEFMR----NEAKSKAFSKKSVADPFIDATGLRNFAENFDDRYNTAWIDMDSGFYKQLTESVVRGVREARQILMRATG-SGEVDRMKVVQALRSVSRYFDEAL 417          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A1Z5KS82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS82_FISSO)

HSP 1 Score: 119 bits (297), Expect = 1.710e-24
Identity = 75/176 (42.61%), Postives = 106/176 (60.23%), Query Frame = 1
Query:  433 RLTGSVGGRWEKAKEGVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAM 960
            +LT  VGG W+K  E +EV+ +KP V +WG F RPKDISKA+GGGR      ++ E ++   EAT   L+ YR     D++ E+ +  +I  AL     AM+ G    AV+ LE + + CS+N  +G  VFLELAMA E +GR  +A  +Y+ L +S+  E++  A RL  GLEAM
Sbjct:  134 QLTTGVGGSWKK-NETLEVEYYKPKVGSWGAFARPKDISKAYGGGRRVGPGYSNEELSEASVEATRERLQQYREKVGIDVKSEKDHAAEIDLALRKGAYAMQRGMYSAAVTDLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAM 308          
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Match: A0A7S0T4K8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4K8_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 1.070e-23
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1
Query:  496 HKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDP----EEAKRREEATEALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEAIKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQAKRLNEGLEAMDMLNMGRPG 987
            HKP VSTWGVF RP +ISKA+GGGR        P    EE +++ + T+ALL SYR     D ++E  + + + EA+A S++ +K    + AV  LE++K+  ST   LG  + +ELA+ALEV GR+  A+++Y  L++S    + ++AK+L+ G  AM  L +   G
Sbjct:   54 HKPKVSTWGVFPRPDNISKAYGGGRTIPRGGLQPREETEEDRKKAQRTKALLDSYRTAMGIDTKREEQHRETVLEAIAKSRKLLKDSRPYEAVRLLESVKEYVSTKSELGGELHMELALALEVVGRTEDARELYAELRKSPVSRIASKAKQLSFGFSAMQELKLDSDG 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1510.3388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR8_ECTSI1.460e-22759.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWJ1_9PHAE2.920e-20658.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2YC46_9STRA1.480e-2940.78Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S3KWU3_9STRA1.650e-2943.09Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S0PVG5_9EUKA9.290e-2739.71Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S4D540_HETAK1.160e-2635.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3V4N3_9STRA4.110e-2527.65Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2A140_TRICV9.210e-2533.33Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A1Z5KS82_FISSO1.710e-2442.61Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S0T4K8_9RHOD1.070e-2339.88Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1510contigH-elongata_contig1510:6622..13334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score659.8
Seed ortholog evalue1.2e-186
Seed eggNOG ortholog2880.D7FQR8
EggNOG OGs28KSY@1,2QT92@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_000260.1
Exons10
Model size1794
Cds size1767
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929893.1265638-UTR-H-elongata_contig1510:6621..66481622929893.1265638-UTR-H-elongata_contig1510:6621..6648Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1510 6622..6648 +
1691679198.1293724-UTR-H-elongata_contig1510:6621..66481691679198.1293724-UTR-H-elongata_contig1510:6621..6648Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1510 6622..6648 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929893.1400676-CDS-H-elongata_contig1510:6648..68101622929893.1400676-CDS-H-elongata_contig1510:6648..6810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 6649..6810 +
1691679198.1391509-CDS-H-elongata_contig1510:6648..68101691679198.1391509-CDS-H-elongata_contig1510:6648..6810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 6649..6810 +
1622929893.1521568-CDS-H-elongata_contig1510:9561..97921622929893.1521568-CDS-H-elongata_contig1510:9561..9792Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 9562..9792 +
1691679198.1478846-CDS-H-elongata_contig1510:9561..97921691679198.1478846-CDS-H-elongata_contig1510:9561..9792Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 9562..9792 +
1622929893.163055-CDS-H-elongata_contig1510:9971..101951622929893.163055-CDS-H-elongata_contig1510:9971..10195Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 9972..10195 +
1691679198.157543-CDS-H-elongata_contig1510:9971..101951691679198.157543-CDS-H-elongata_contig1510:9971..10195Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 9972..10195 +
1622929893.184315-CDS-H-elongata_contig1510:10464..106061622929893.184315-CDS-H-elongata_contig1510:10464..10606Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 10465..10606 +
1691679198.1764982-CDS-H-elongata_contig1510:10464..106061691679198.1764982-CDS-H-elongata_contig1510:10464..10606Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 10465..10606 +
1622929893.1997337-CDS-H-elongata_contig1510:10896..110451622929893.1997337-CDS-H-elongata_contig1510:10896..11045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 10897..11045 +
1691679198.1840641-CDS-H-elongata_contig1510:10896..110451691679198.1840641-CDS-H-elongata_contig1510:10896..11045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 10897..11045 +
1622929893.213055-CDS-H-elongata_contig1510:11307..114221622929893.213055-CDS-H-elongata_contig1510:11307..11422Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 11308..11422 +
1691679198.1919315-CDS-H-elongata_contig1510:11307..114221691679198.1919315-CDS-H-elongata_contig1510:11307..11422Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 11308..11422 +
1622929893.228366-CDS-H-elongata_contig1510:11755..118601622929893.228366-CDS-H-elongata_contig1510:11755..11860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 11756..11860 +
1691679198.2000237-CDS-H-elongata_contig1510:11755..118601691679198.2000237-CDS-H-elongata_contig1510:11755..11860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 11756..11860 +
1622929893.4979756-CDS-H-elongata_contig1510:12055..124471622929893.4979756-CDS-H-elongata_contig1510:12055..12447Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 12056..12447 +
1691679198.2095184-CDS-H-elongata_contig1510:12055..124471691679198.2095184-CDS-H-elongata_contig1510:12055..12447Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 12056..12447 +
1622929893.515834-CDS-H-elongata_contig1510:12768..129211622929893.515834-CDS-H-elongata_contig1510:12768..12921Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 12769..12921 +
1691679198.219276-CDS-H-elongata_contig1510:12768..129211691679198.219276-CDS-H-elongata_contig1510:12768..12921Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 12769..12921 +
1622929893.534158-CDS-H-elongata_contig1510:13240..133341622929893.534158-CDS-H-elongata_contig1510:13240..13334Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 13241..13334 +
1691679198.2290568-CDS-H-elongata_contig1510:13240..133341691679198.2290568-CDS-H-elongata_contig1510:13240..13334Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1510 13241..13334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1510.3388.1prot_H-elongata_contig1510.3388.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1510 6649..13334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1510.3388.1

>prot_H-elongata_contig1510.3388.1 ID=prot_H-elongata_contig1510.3388.1|Name=mRNA_H-elongata_contig1510.3388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=589bp
MTGDKEKAVSELEAGRRTIVRDEDDPEMEANLLDGLMVSRVDDFEEELRA
AYMPADSELRGRGGGKKFDGGFASTIEGAEAFFNKPSPFQKAARYKAQEE
ATTGSTAGIDLAADAIDGAETAVEAAGEVMAEASGRLTGSVGGRWEKAKE
GVEVDTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDPEEAKRREEAT
EALLRSYRGVSDADLEKERSNEKQIKEALAVSKRAMKFGDTFGAVSALEA
IKQDCSTNGPLGAVVFLELAMALEVTGRSYQAQDIYKVLKRSKNREVRAQ
AKRLNEGLEAMDMLNMGRPGEVQEESEISKMWTSKFQQARLMSGDKEKKY
DAVYFDKDLDGRPKASSVFAVEDAKEVLMFASKYRGGVSSSRIINAFEFL
KKRSEEAVLAAKREAAALKREEAQLPPASTRQPTIDETPDGGDNEAANEN
LEGKSLELKRRRPPWERKTESAFPKGGAGLMSLMGDASSLEQRVQGGWNL
VIKAGGSKVEVLRRDSSLVLSPGGSATAVEPAGPLSVAKEGQWEMDANDR
MVKLDFKSSKWVGLVDLGGGQENLEVLALDDKLLVASES
back to top

mRNA from alignment at H-elongata_contig1510:6622..13334+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1510.3388.1 ID=mRNA_H-elongata_contig1510.3388.1|Name=mRNA_H-elongata_contig1510.3388.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6713bp|location=Sequence derived from alignment at H-elongata_contig1510:6622..13334+ (Himanthalia elongata Himel1 dioecious)
CAGGAGGAAATTCGGCAGAAAGTGGTGATGACGGGCGATAAGGAAAAAGC GGTCAGCGAGCTGGAAGCTGGGCGACGGACGATCGTGAGAGACGAGGACG ATCCGGAAATGGAGGCCAACCTCCTGGATGGCCTCATGGTCTCAAGGGTG GATGACTTCGAGGAAGAACTGAGGGCGGCTTATATGCCGGTGAGATCTCA ATCAATTGACTGATCGAATGTAATACTTTGCTATATGTAATGACCACACG TCACCGCGTTTCCAATTCAGGTACTGGCCAACGGACGAGAAAACACGTCT CAGAAAAATCGTTGTATGAAAATTATTTTCACAAAATATATTTACCAAAC TTTGTTAAGTCTTATAATATCACTCTGGCGGTGCCAGCAGAGTGCAGAGG ATGTACAGTAGTTTGTAGTATTTGTCGTAAAAAGACATATGAACTCATTC CAACCCTCCGAACATTCACGCCTTCTTAGCACCGTGAGAGGTGCAATCCA GGGGACCAACTATCGTCAGATTCGAATGTGTATATTACTATATTTGAGCA CAAAATCGTCACATGTGATTAATTGTGTTCATTATTAATAGTAAGTTAAT CGGGTCGACGGTATAATATCGGGGGGATATATCCCATTATTATCCCATAC GTACTGTCTGTGACTGTATCGCACATGCCCACTCTACCAATAATGGGTGT GGAAAAAGAGAGGCGCACAATAATTGGTCCATGGGGTTACCAGAATAGGC TGCACCCGTTACTCAAGCTACCTTGAGGACTGTTGGCTCAGTATCGGCGG ACTCTCGGTAGTAAATGCCATCGGTACGCAATTGCGTGACCTGATGAAAT CGGGATTGACCCGATGTCGTTTGACGGTAGAGATGGACGCCGTCGCGAAA AACGAGAGGATCGAGAGGATCCCGAGAGTAAGCACCAGATTCAGCCTGGG TTGGGAGAATGAGCAGGCTGACGCGGGACGAGACTGCCGAACCCGTCTCG CGAGACCAAATTATCAGGCGCGAACGGGGACAGGGAAAAAATATTTTTCC CTGTTCAGCTGACCACAAGCAGGAGGCAACCAAATCCGGTCGATCCCTAC TCTTCTATATGTCAAGATGTGAAGACCGCACATTTACATTATTCATCATG TGGGGACGTCAAACCAGAGTACTATAGCCTAGAGAGTAAGATGTAGTTAG CAAGGGTTCTTAGGTATGGGTAAGGCTCGGTAGAGGTATTTCTATTTCTA TATCAAATTATTTTGGTTAGAGGAAAAAAAAGGGGTGCGGGAGTATTTGA AAATACAAGAGCATGCTCCATTGTGTGTGTGGTCATGACGTCATTACAAT ATAGCCTTTAGTATGGATCAACCGGATATGCTTGTCAATCCTGCTTGTGG TTAGCTGAATAGCTGAATAGGGGAAATGAATTTTCCCTGTCCCCGTTCGC TCCTGAGAATTTGGTCTTGCAAGACGGCCGAAGCCGTCTCGTCCCGCGTC AGCCCGTTCATTCTTCCAACTCAGGCTGAATATGATGCGTACTCTTGAGA TCCTCTCGATCCTCTCGCTTTCCGCAACGGCGTCCACCTCTGCCGTCAAC CGCCATCGGGTTAATCCCGATTTCATCAGGTCGCGCAGCGTGCAGATGCA TTTACCACCGAGAGATCGCCGGCACTGAGCCAGTAGTCCTCCAGGTAGCT TTTGAGTAACGGGTGCAGCCTATTCAGGTAACCCCATGGACCAATGATTG TGAGCCTCTCTTTTCTTACACCCACTATTGGTATTATAGTGGACATGTGC TGTAGATACAGTACAAAGACAGTATCGGAGGCGGTTATGCTGCCTTGTAT CTGACATGCGGACAGCGAGCGGATATAAATTTTATTGTGCTTCCCTGACG TCATGCTCGGCAGAGTTTAGTTTATAGGTGATTTTATTATAGAAGATCTC GTTAGTCCAGGGGTAAGCCTTCGATGCTTGAGAGGGGGGGGGGGTAGTTA TATTAAATACATGCCCTATCCAAACGGCGATAGACCATGTATCCCAACAA TGCCGAAACGGAGCGAAATGCCGGGTTTTCTCCGTCCACGCTGCGTTTCA CGAGAAAGATATCAGTTTCTAGTCGTCATAGTTGCGTTTGCTGTGCCAAA TCGGGCACACCATGCCATGGGTTAATTGAATAAATGTTGCACGTTCAACG GGTGCGACTTTGACTATTCTATACTATATACTATACTCCAAGTACCGAAA ACGGACTTTGATCTCCGCGCTAACAGATAAGCACCGAACCCACACCACAT ATCCTCAGGCTATAATCTACTCGTGAATAATCTTGGCGACGTAATCGCCT CCGATACTATACTGTCTTGACTGTATCAAACATATTCACGGTATCAATAG TGGGTGTGGAAAAATATAGGCGTTCCATGGGGTCACCAGAATAGGCTGCA CCCGTTACTCAAGCTACCTTAAGGATTGATGGCTCAGTGTCGGCGGACTC TCATGGGTAAACAATATCGGTACCCAATTGCATGACCTGATGAAATCGGG AATGACCCGAGGGCGGTTGAAGGTAAAGATGGACGCCGTCGCGCAAAAGA AGAGGATCGAGAGGATCCCGGGAGTACGCATCATAATAAGCCTGGGTTGA GAGAATGGACAGGCTGACGCGGGACGGGACGGCCGATACCGTCTCGCGAG ACCAAATTCTCAGGCGCGAACGGGGAAAGGGGAAATTAATTCTCCCTGTT CAGTTGACCACGAGCAAATTTGGCAGCCAAATCCGGTTAATCCATACTAT AGGTTTCATTCCTTTGGGGGAATAGAGAGAGAGAGAGAGAGAGACAAGGA TCTTCGACCGAATAATCTTGAGATGATATGCCACGCACTGCATGAACTCC CCCATGTTCTATGAATATAGCATGCTGTTGCTGTTGGCAGGCCGATTCGG AGCTAAGGGGACGAGGAGGGGGGAAAAAGTTCGACGGAGGCTTCGCTTCT ACGATCGAAGGAGCCGAGGCGTTCTTCAACAAGCCTTCGCCCTTCCAGAA GGCAGCTCGGTACAAGGCTCAGGAGGAGGCAACGACAGGATCTACGGCAG GCATCGATCTCGCCGCGGACGCCATCGACGGCGCAGAAACCGCTGTCGAG GCCGCGGGAGAAGTCATGGCGGTGAGGGGAGCTATTGTCAGTTTGTAACC ACAGTATGTCGTTGACGTAACGGCACACAAGAAACACGGGTTTTTATGAC AATGTCGCAAGGTTCGATGACTGTAACGCGTCTGTCTTGTTTGGCGGCGA CTGTAACGCTACCCTCCTGCGTCTTGCGTCAGGACGCGATGACAGGAAAG GAAGCGTCCGGGAGACTAACGGGAAGTGTTGGTGGACGGTGGGAAAAGGC GAAGGAAGGGGTAGAAGTCGACACCCACAAGCCGGTGGTGAGCACGTGGG GTGTATTCGAGCGGCCCAAGGATATCAGCAAGGCGTTCGGGGGGGGGCGA GACCCCACGCTGCGAAAGACGGACCCTGAAGAGGCGAAGAGACGAGAGGA AGCGACGGAGGCCTTGTTGAGAAGGTACCTTATGTTCGGAAGCAGTCGAT GTCGGAGGAGTTCCTCGCGCGGGCTTTACCTGATTTAGGCATGGAAAAGC TCGATAATAACTGCGGCGCTTCATGAGTTCAGCCATTGTTTCGATGTATC GATCACGGCCAAGTGATTTCCCATTGATAAGCTCTATTGTTTCAATATCG TATGTAGGACAGGCCAAAACTCGGCCCAGGAATATAAGATATTTACTGAT TGTTAATCTCCGATGTGTTACTCGTGCGTTGCGGTAACGTCAGCTATCGT GGGGTGTCGGACGCGGACTTGGAGAAGGAGAGGTCCAACGAAAAGCAGAT CAAGGAGGCCCTCGCGGTGTCCAAGCGGGCCATGAAGTTCGGGGACACTT TCGGCGCTGTGTCTGCTCTTGAGGCAATCAAGCAGGTGACCCCTCCTCTG CCTCGAGACAAACGGCGCAACGCAAGGAGTTGTCCTCCTTCGAAAAATGA AGCACGTTGACAACCCGATCCTCGCTCGGAGACTCTTTTAATCTCCTTGA CGTAGCCAGTTGGAGCAGCGTCTCGTCTCGCTTTCGCGTTTCTCCTCTGT TGCTGATTTGTCTTTGCGCTGTAAGCTACCAGTTGTCCAGCACCAATCCT CCCGCGATGATAGGAAGGTCACAACTTCACCGCCTTTCCGCGCCTATTCC CTTTCTACCCAACCCGCACCGGCAGGATTGCTCCACGAACGGCCCGCTGG GGGCCGTCGTTTTTCTGGAGCTGGCAATGGCGTTAGAGGTCACGGGGAGA TCTTACCAAGCTCAAGACATCTACAAGGTCCTGAAGCGGTCCAAAAACCG CGAGGTGCGGGCGCAGGCCAAGAGGTGGGAGCTCGAAAGCCGCGATTTGC AGAAGAGTGGGGCGCGGACATGATGCGGGCTGTCGACGAGCCCGTTCGGG ATCGAATTAAAAACTAAATAAATAAAAAAGTGTGCGGAAATGTCCACGCA CCACCATTCCTCTTTAGTATAGGAAAATATTATCGACGTAGGTTTGTCTA GAGAGGGCGTTGTTGTTTTTTCGTTTGCAGACGTGTCGAGTCCTGTCGCG GTGGGGCATGGGCGCGGACGACGGTAATGTCGGCAGGCTGAACGAGGGGT TGGAGGCGATGGACATGCTCAACATGGGACGGCCGGGGGAAGTGCAAGAG GAATCCGAGATCAGCAAGATGTGGACTTCCAAGTTCCAGCAGGCACGACT CGTTGTTCTTGCTACATTACATTTTGAAAAAAAGTACAGTTTTTTGTTGT TGCCATGGTTGACCATGGCACCAAGCATTGCCGCCGCACGAGTCGAGAGG GTTGCGGAAACGTAATTTTTCAACGGCTATGACCGAAGGAAAGATCTTGG GCGGTGCTTTTGTCACCCCATCCGACTTCCCGCCCAATCGGAGATCCCTC ATCCCCGAGGAAACACTCTTGTTTGTTTCTCTGGTCGAAACCACACCTTT TGGTGTTATTTGTTAGTATGTTTATTGCGTAACGTAAGGTATCTTTTGGC ATATTTCACACTTGGTGTCGTGCGCGTGATGCAGATGTCGGGGGATAAGG AGAAGAAATACGACGCCGTATACTTCGACAAGGATTTGGACGGGAGGCCA AAGGCGTCAAGCGTATTCGCGGTGGAAGACGCCAAGGAAGTGAGGGCGAG GTTTTCACGTTGTCGAAATGAGGCGTTCGTGTGCGCTTCTCAACATTCCA CGGTGACGAAATCGATCTCGATCTATCCTACGGTGTAGAGCACATCATCG TCTCCTCGGCGCGCAATCGAAATCGACCATCTTGCAACACCCTCTACGAC GCAGAAGGTTCTGCTGCTGTTGCTTGCCTTTCAGGTGCTCATGTTCGCGT CCAAGTACCGCGGAGGAGTATCCTCGAGCCGCATCATCAACGCGTTCGAG TTCTTGAAGAAGCGCTCCGAGGAAGCGGTCCTCGCTGCGAAGAGAGAAGC CGCGGCCCTAAAGAGGGAGGAGGCTCAACTTCCCCCCGCGAGTACACGGC AGCCGACGATCGACGAGACCCCCGACGGTGGCGATAACGAGGCGGCGAAT GAAAATTTAGAGGGAAAATCTTTGGAGTTGAAGAGGCGACGACCGCCATG GGAGAGAAAAACAGAGAGTGCATTTCCAAAGGGTGGCGCCGGGCTGATGT CGTTGATGGGTGACGCGTCGAGCCTGGAGCAGAGGGTACAGGGCGGATGG AATCTTGTGATCAAAGCCGGCGGCAGGTGAATTTTCGGTGTGGACGATTT CCGGACTAAATCGACTCATGACCCGCTCTTCAAAATATGGCGTATTATAC ACTTCTTGGAGTAGATTCATGTTTTTATGCTCTGTACCTGTAGACTAGAG GCTAACGAAGGCCACCTGATCAAAGCGGGCCAACCAATAACTATCCTTAT AAAAACAGCAGCGTATCACGCTAATACGAACATACTTTTACGAAGTACTT GTGTTTCGTTCCCGCCGTCGCTTGCGCGTTGGCCCGAGCCTAAACCCGCG GTTCTCCTCAATCCATGGATCTCGCACGGGCTTATCGCGACTCGCAGCAA AGTAGAGGTGCTCCGACGGGACTCGTCGCTCGTCCTGAGTCCAGGGGGCT CGGCGACTGCCGTCGAGCCGGCCGGGCCTCTCTCTGTCGCGAAGGAGGGC CAATGGGAAATGGACGCGAATGATCGGATGGTCAAGCTTGACTTCAAGAG GTGAGGCCTCCAAAATGGGTTAACGCCGTAGCTGCTCATAGCAGGAAATA TTTTGCAGCCACGGGGCTGGCGGGAACGGACGCTTTGTTTGATCGGCGGT CTGAACTTGTTCGTGGAGCACGGCTAGTGGACATGCCAGCGCAACTGGTC TGTTAGATAGCTTACCGATACGAAGCTTGACGAACAGACAAGACTTCCAC ACATTAAGTATGAAGCAATGTAACATCGCGAGAAGGCGAGAAATGCGTTC GCTGATTGGAACAGCATCCAAACGCTTTGGCCAATCATCGATTATTTTGT GCCCTTAAACCAATGACAGCTCCAAGTGGGTCGGCCTGGTTGATCTAGGC GGCGGACAAGAGAACCTGGAGGTGCTGGCCCTAGACGATAAGCTCTTGGT CGCGTCGGAATCG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig1510:6622..13334+

>mRNA_H-elongata_contig1510.3388.1 ID=mRNA_H-elongata_contig1510.3388.1|Name=mRNA_H-elongata_contig1510.3388.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3534bp|location=Sequence derived from alignment at H-elongata_contig1510:6622..13334+ (Himanthalia elongata Himel1 dioecious)
ATGACGGGCGATAAGGAAAAAGCGGTCAGCGAGCTGGAAGCTGGGCGACG
GACGATCGTGAGAGACGAGGACGATCCGGAAATGGAGGCCAACCTCCTGG
ATGGCCTCATGGTCTCAAGGGTGGATGACTTCGAGGAAGAACTGAGGGCG
GCTTATATGCCGATGACGGGCGATAAGGAAAAAGCGGTCAGCGAGCTGGA
AGCTGGGCGACGGACGATCGTGAGAGACGAGGACGATCCGGAAATGGAGG
CCAACCTCCTGGATGGCCTCATGGTCTCAAGGGTGGATGACTTCGAGGAA
GAACTGAGGGCGGCTTATATGCCGGCCGATTCGGAGCTAAGGGGACGAGG
AGGGGGGAAAAAGTTCGACGGAGGCTTCGCTTCTACGATCGAAGGAGCCG
AGGCGTTCTTCAACAAGCCTTCGCCCTTCCAGAAGGCAGCTCGGTACAAG
GCTCAGGAGGAGGCAACGACAGGATCTACGGCAGGCATCGATCTCGCCGC
GGACGCCATCGACGGCGCAGAAACCGCTGTCGAGGCCGCGGGAGAAGTCA
TGGCGGCCGATTCGGAGCTAAGGGGACGAGGAGGGGGGAAAAAGTTCGAC
GGAGGCTTCGCTTCTACGATCGAAGGAGCCGAGGCGTTCTTCAACAAGCC
TTCGCCCTTCCAGAAGGCAGCTCGGTACAAGGCTCAGGAGGAGGCAACGA
CAGGATCTACGGCAGGCATCGATCTCGCCGCGGACGCCATCGACGGCGCA
GAAACCGCTGTCGAGGCCGCGGGAGAAGTCATGGCGGAAGCGTCCGGGAG
ACTAACGGGAAGTGTTGGTGGACGGTGGGAAAAGGCGAAGGAAGGGGTAG
AAGTCGACACCCACAAGCCGGTGGTGAGCACGTGGGGTGTATTCGAGCGG
CCCAAGGATATCAGCAAGGCGTTCGGGGGGGGGCGAGACCCCACGCTGCG
AAAGACGGACCCTGAAGAGGCGAAGAGACGAGAGGAAGCGACGGAGGCCT
TGTTGAGAAGGAAGCGTCCGGGAGACTAACGGGAAGTGTTGGTGGACGGT
GGGAAAAGGCGAAGGAAGGGGTAGAAGTCGACACCCACAAGCCGGTGGTG
AGCACGTGGGGTGTATTCGAGCGGCCCAAGGATATCAGCAAGGCGTTCGG
GGGGGGGCGAGACCCCACGCTGCGAAAGACGGACCCTGAAGAGGCGAAGA
GACGAGAGGAAGCGACGGAGGCCTTGTTGAGAAGCTATCGTGGGGTGTCG
GACGCGGACTTGGAGAAGGAGAGGTCCAACGAAAAGCAGATCAAGGAGGC
CCTCGCGGTGTCCAAGCGGGCCATGAAGTTCGGGGACACTTTCGGCGCTG
TGTCTGCTCTTGAGGCAATCAAGCAGCTATCGTGGGGTGTCGGACGCGGA
CTTGGAGAAGGAGAGGTCCAACGAAAAGCAGATCAAGGAGGCCCTCGCGG
TGTCCAAGCGGGCCATGAAGTTCGGGGACACTTTCGGCGCTGTGTCTGCT
CTTGAGGCAATCAAGCAGGATTGCTCCACGAACGGCCCGCTGGGGGCCGT
CGTTTTTCTGGAGCTGGCAATGGCGTTAGAGGTCACGGGGAGATCTTACC
AAGCTCAAGACATCTACAAGGTCCTGAAGCGGTCCAAAAACCGCGAGGTG
CGGGCGCAGGCCAAGAGGATTGCTCCACGAACGGCCCGCTGGGGGCCGTC
GTTTTTCTGGAGCTGGCAATGGCGTTAGAGGTCACGGGGAGATCTTACCA
AGCTCAAGACATCTACAAGGTCCTGAAGCGGTCCAAAAACCGCGAGGTGC
GGGCGCAGGCCAAGAGGCTGAACGAGGGGTTGGAGGCGATGGACATGCTC
AACATGGGACGGCCGGGGGAAGTGCAAGAGGAATCCGAGATCAGCAAGAT
GTGGACTTCCAAGTTCCAGCAGGCACGACTCGCTGAACGAGGGGTTGGAG
GCGATGGACATGCTCAACATGGGACGGCCGGGGGAAGTGCAAGAGGAATC
CGAGATCAGCAAGATGTGGACTTCCAAGTTCCAGCAGGCACGACTCATGT
CGGGGGATAAGGAGAAGAAATACGACGCCGTATACTTCGACAAGGATTTG
GACGGGAGGCCAAAGGCGTCAAGCGTATTCGCGGTGGAAGACGCCAAGGA
AATGTCGGGGGATAAGGAGAAGAAATACGACGCCGTATACTTCGACAAGG
ATTTGGACGGGAGGCCAAAGGCGTCAAGCGTATTCGCGGTGGAAGACGCC
AAGGAAGTGCTCATGTTCGCGTCCAAGTACCGCGGAGGAGTATCCTCGAG
CCGCATCATCAACGCGTTCGAGTTCTTGAAGAAGCGCTCCGAGGAAGCGG
TCCTCGCTGCGAAGAGAGAAGCCGCGGCCCTAAAGAGGGAGGAGGCTCAA
CTTCCCCCCGCGAGTACACGGCAGCCGACGATCGACGAGACCCCCGACGG
TGGCGATAACGAGGCGGCGAATGAAAATTTAGAGGGAAAATCTTTGGAGT
TGAAGAGGCGACGACCGCCATGGGAGAGAAAAACAGAGAGTGCATTTCCA
AAGGGTGGCGCCGGGCTGATGTCGTTGATGGGTGACGCGTCGAGCCTGGA
GCAGAGGGTACAGGGCGGATGGAATCTTGTGATCAAAGCCGGCGGCAGGT
GCTCATGTTCGCGTCCAAGTACCGCGGAGGAGTATCCTCGAGCCGCATCA
TCAACGCGTTCGAGTTCTTGAAGAAGCGCTCCGAGGAAGCGGTCCTCGCT
GCGAAGAGAGAAGCCGCGGCCCTAAAGAGGGAGGAGGCTCAACTTCCCCC
CGCGAGTACACGGCAGCCGACGATCGACGAGACCCCCGACGGTGGCGATA
ACGAGGCGGCGAATGAAAATTTAGAGGGAAAATCTTTGGAGTTGAAGAGG
CGACGACCGCCATGGGAGAGAAAAACAGAGAGTGCATTTCCAAAGGGTGG
CGCCGGGCTGATGTCGTTGATGGGTGACGCGTCGAGCCTGGAGCAGAGGG
TACAGGGCGGATGGAATCTTGTGATCAAAGCCGGCGGCAGCAAAGTAGAG
GTGCTCCGACGGGACTCGTCGCTCGTCCTGAGTCCAGGGGGCTCGGCGAC
TGCCGTCGAGCCGGCCGGGCCTCTCTCTGTCGCGAAGGAGGGCCAATGGG
AAATGGACGCGAATGATCGGATGGTCAAGCTTGACTTCAAGAGCAAAGTA
GAGGTGCTCCGACGGGACTCGTCGCTCGTCCTGAGTCCAGGGGGCTCGGC
GACTGCCGTCGAGCCGGCCGGGCCTCTCTCTGTCGCGAAGGAGGGCCAAT
GGGAAATGGACGCGAATGATCGGATGGTCAAGCTTGACTTCAAGAGCTCC
AAGTGGGTCGGCCTGGTTGATCTAGGCGGCGGACAAGAGAACCTGGAGGT
GCTGGCCCTAGACGATAAGCTCTTGGTCGCGTCGGAATCGCTCCAAGTGG
GTCGGCCTGGTTGATCTAGGCGGCGGACAAGAGAACCTGGAGGTGCTGGC
CCTAGACGATAAGCTCTTGGTCGCGTCGGAATCG
back to top