mRNA_H-elongata_contig15095.3385.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: D7FX94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX94_ECTSI) HSP 1 Score: 361 bits (926), Expect = 7.140e-123 Identity = 199/282 (70.57%), Postives = 234/282 (82.98%), Query Frame = 1
Query: 10 SDSAGMDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKNGEFIVPLTQERLGSLRQSIKIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQGSRRGDTGTVGKASNAP--RRTPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIENAVPEERPPPGMLE 849
SDSAGMDT+I++LK APD + LTLKVSK VQ+VAQPAFFLR+AE AE+A D +Q+ + LA +VT+ LERLV+FAEEKMDDSSSLLQI+VTSAAEKNGEF+VPL++ERL +LRQS+KIHR QLDNNFLATVQAWMEK K EEM+GMVVILQKILQMYASQ+IL + TG G+A A +RTPA LL++IL DAD+WDG+L GL+ G+GMTGGVTK+GLLGA+QVAVE +LQQENGSMAQRVQAE+LSELCKRIE A PE+ PGMLE
Sbjct: 2 SDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEQQRVKLENLATQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSMKIHRDQLDNNFLATVQAWMEKSGKEEEMQGMVVILQKILQMYASQEILLG--SAEPSATGEAGEADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVTKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACPEQPLGPGMLE 281
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A6S9G5L4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9G5L4_HETAK) HSP 1 Score: 170 bits (431), Expect = 9.020e-48 Identity = 105/281 (37.37%), Postives = 176/281 (62.63%), Query Frame = 1
Query: 1 IMQSDSAGMDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKNGEFIVPLTQERLGSLRQSIKIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQGSRRGDTGTVGKASNAPRR---TPAGA-LLDKILETDADQWDGILN-GLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIENAVPEER 828
+ S ++ + +ID ++AA P+ L ++K ++KVA P+FF+ IA+RA+ A + ++ A RLA E T L+ L+K AE +MD + +++ IV SAAE +G+F+VPL+ ER +++ ++ ++LD+NFL+TV WM+K + ++M+GMV ILQ++LQ+YA+ + APRR PA + L D +L++D + W G++ GL + + + L+GA+QVA+E+ V+QQENGSM+QRVQAE+L EL + ++ +E+
Sbjct: 47 LRMSTNSDYEYIIDAMRAA-KPEELPGIIAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAEE-DKMDGMVGILQRVLQLYAANAL-----------------KLGAPRREGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERR-----CSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQVQEK 303
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S1ZNW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNW5_TRICV) HSP 1 Score: 167 bits (424), Expect = 5.770e-46 Identity = 109/274 (39.78%), Postives = 162/274 (59.12%), Query Frame = 1
Query: 25 MDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLTQERLGSLRQSIK-IHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQ-----------QGSRRGDTGTVGKASNAPRRTPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIE 807
MD +I +L A P L VSK+++ V+ P FFLRIAERA+ D +KA L+ + LE +V E+++D+ + +++ +V +AAE + GEF+VPL+ ER+ ++R+++ I LD FL+TV AWM K + + M+GMV ILQK+LQ+YA +I + G +G V PA ALL+++++TD D WD L +++ + GGV+ + ++G VQ +E VL ENGSMAQRVQAEYL EL RIE
Sbjct: 99 MDDMITKLSNA-KPYELPQAVSKAIRVVSSPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSHQ-DGMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELR-RSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIE 369
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S1ZMP8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMP8_TRICV) HSP 1 Score: 158 bits (399), Expect = 1.370e-43 Identity = 99/250 (39.60%), Postives = 149/250 (59.60%), Query Frame = 1
Query: 97 VQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLTQERLGSLRQSIK-IHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQ-----------QGSRRGDTGTVGKASNAPRRTPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIE 807
++ V+ P FFLRIAERA+ D +KA L+ + LE +V E+++D+ + +++ +V +AAE + GEF+VPL+ ER+ ++R+++ I LD FL+TV AWM K + + M+GMV ILQK+LQ+YA +I + G +G V PA ALL+++++TD D WD L +++ + GGV+ + ++G VQ +E VL ENGSMAQRVQAEYL EL RIE
Sbjct: 1 IRVVSPPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSHQ-DGMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELR-RSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIE 248
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S2AZA7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZA7_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.560e-43 Identity = 99/234 (42.31%), Postives = 143/234 (61.11%), Query Frame = 1
Query: 106 VAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKNGEFIVPLTQERLGSLRQSIKIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQGSRRGDTGTVGKASNAPRRTPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIE 807
V+ P FF+RIAE +++A ++K A LA + N LE +V+ EEK+D +S+LLQ I+ AAE +GEF+VPL + +LR+++ +R LD++FL+TVQAWM KC +EGMV ILQ++LQ+YAS ++ +V S A + ALLDK+ T +D WD +L + + + E LL VQ +ET VL QE GS +QRVQAE+L EL +RI+
Sbjct: 3 VSSPTFFVRIAELSDAAKSEDEKMALSSLATNLVNTLEVIVQRTEEKVDGASTLLQEILAVAAEDDGEFMVPLAPAKAAALREAVLENRASLDDSFLSTVQAWMRKCTD-NGLEGMVTILQQVLQLYASSMLIADD---------SVNADSEA---ASSAALLDKVFATSSDGWDALLRESLLGDSPVC---SSELLLAEVQARIETVVLAQEAGSYSQRVQAEFLRELSQRIQ 220
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S1FS16_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FS16_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.880e-43 Identity = 114/277 (41.16%), Postives = 168/277 (60.65%), Query Frame = 1
Query: 10 SDSAGMDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAA-EKNGEFIVPLTQERLGSLRQSIK-IHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQ---GSRRGDTGTVGKASNAPRR-----TPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIEN 810
+D MD +ID L P + L VS++V+ V P FF+RIAER++ D+ KA F LA + LE +V EEK+D +S+ ++ I+ +AA E+ GEF VPL +++ + +I+ I LD FL TV ++M+K RK + ++GMVVILQK+LQ+YA + I++ + G+R G T + + +P+ LLDKIL++D + WDG+L+ ++ K V+K LLG VQ +E VL ENGSMAQRVQAE++ EL RIEN
Sbjct: 55 TDIQTMDEMIDRLIDVPAYE-LPAAVSRAVRVVGSPLFFVRIAERSDEVKDSATKAKFSALADNIVRTLEVVVSTTEEKLDSNSADVEKIIKAAADEETGEFFVPLNFDQIQKMSAAIREIDPYNLDEGFLTTVDSYMDKSRK-DGLDGMVVILQKVLQLYAGEMIIKGRAENLGARVGATVSGLDPDDVVEEQQSTSSPSSDLLDKILKSDVELWDGLLDS-SIGRKDSD--VSKPQLLGEVQRTMEAVVLGLENGSMAQRVQAEFMRELLMRIEN 326
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S1UWK8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWK8_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.280e-42 Identity = 105/274 (38.32%), Postives = 161/274 (58.76%), Query Frame = 1
Query: 25 MDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPD-NEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLTQERLGSLR-QSIKIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQGSRRG-DTGTVGKASNAPRRTPAGALLDKILETDADQWDGIL-----NGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIENAVP 819
MD +I +L A P L V ++ + + P FFLRIA R + AP ++ K LA+ + + LE +V E+++D ++ ++ I+ +A+E GEF+VPL+++RL +R + +K+ +LD +FL+TV +W K K + M+GMVVI QK+LQMYA + ++ S++G D T TPA L+DK+LETDAD WD ++ N + S +TK ++ +Q +ET V ENGSMAQR+QAEYL EL R+E+ P
Sbjct: 106 MDEMITKLSRA-QPWELPNAVRRAFRVCSSPQFFLRIASRIDQAPKGSDDKERLSALASNMVSTLEAIVSTTEDQLDSRATSVESILKAASEPGTGEFLVPLSEDRLQDMRTEMLKVDASELDESFLSTVDSWTNKS-KLDGMDGMVVIFQKLLQMYAGLSVSRSREASKKGFDKST----------TPASELMDKLLETDADTWDDVVKEAFSNQKSSSTSSEDALLTKGTIVAEIQKTMETVVFGLENGSMAQRIQAEYLKELLSRVEDVAP 367
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A6T8FN14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FN14_9STRA) HSP 1 Score: 155 bits (392), Expect = 8.410e-42 Identity = 110/269 (40.89%), Postives = 164/269 (60.97%), Query Frame = 1
Query: 25 MDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEK-NGEFIVPLTQERLGSLRQSI-KIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQGSRRGDTGTVGKASNAPRRTPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIENAVPEE 825
+D +I +L AAP + L VSK+++ V+ P FFLRIAER + A + +K LA + + LE +V E+ +DD++ ++ IV +AAE +GEF+VPL ER+ S+R+ + +I +LD FL T+ +WM K + + M+GMVVILQK+LQ+YA I +R +TG +AP +PA L +++L D D WD L G+ + ++ E L+ +Q +E+ VL ENGSMAQRVQAEYL EL R+E A+P+E
Sbjct: 72 IDDMITKLLAAPSHE-LPRVVSKAIRVVSSPRFFLRIAERTDMATSDAEKDKLSELAGNLVSTLEAVVSTTEKVLDDTALDVENIVKAAAEPLSGEFLVPLLPERIASMREVMDQIESPRLDEGFLTTIDSWMNKSGQ-DGMDGMVVILQKVLQIYAGTVI------TRARNTG------DAP--SPAAVLFEELLNMDTDNWDFQLRNKIGEGEEL---LSSEALMAEIQRTIESVVLGLENGSMAQRVQAEYLRELITRVE-AMPQE 320
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S0XTZ8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTZ8_HEMAN) HSP 1 Score: 154 bits (389), Expect = 2.700e-41 Identity = 97/248 (39.11%), Postives = 151/248 (60.89%), Query Frame = 1
Query: 85 VSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAEKNGEFIVPLTQERLGSLRQSIKIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILERQQGSRRGDTGTVGKASNAPRRTPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIENAVPEER 828
V+ +++ V+QP+FF++IAERA+ A D E K LA V LE ++ EEKMDD+S L+Q +++SAAE+NGEF VPL ER+ +R +K R+ +D LATV A+M+K + ++++G+V+ILQK+LQ++A+++++ P +L+++L + +WDG+L +G+ T E + AVQ VE VLQQ +GS QRVQAE+L EL R++N PEE+
Sbjct: 105 VAANIKAVSQPSFFIKIAERADEA-DEEGKEKLSALADNVVATLEAVMARTEEKMDDASELVQTLLSSAAEENGEFDVPLKPERVAFMRAKVKEQRELIDEGILATVFAYMKKANE-DQLDGLVLILQKLLQLWAAEELVAA---------------------GPGNEVLERLLLAEESEWDGLLQEAVAAGETDT-----ESMQSAVQSCVERVVLQQASGSHGQRVQAEFLRELLSRLKNT-PEEK 323
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Match: A0A7S4UFJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFJ3_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.770e-41 Identity = 109/274 (39.78%), Postives = 159/274 (58.03%), Query Frame = 1
Query: 25 MDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESAPDNEQKAAFDRLAAEVTNALERLVKFAEEKMDDSSSLLQIIVTSAAE-KNGEFIVPLTQERLGSLRQSI-KIHRQQLDNNFLATVQAWMEKCRKAEEMEGMVVILQKILQMYASQDILE-RQQGSRRGDTGTVGKASNAPRR----------TPAGALLDKILETDADQWDGILNGLAVSGKGMTGGVTKEGLLGAVQVAVETAVLQQENGSMAQRVQAEYLSELCKRIE 807
MD +I +L A P L VS++V+ V+ P FFLRIAERA+ A + +K LA + + LE ++ E+++D+ + ++ +V +AAE ++GEF+VPL+ ER+ +++ ++ K+ LD FL+TV AWM K + + M+GMV ILQK+LQMYA I+ R Q G++ + TPA ALL+K++ D D WD L + GG++ L+G VQ +E VL ENGSMAQRVQAEYL EL RIE
Sbjct: 82 MDDMITKLADA-KPYELPNAVSRAVRVVSSPRFFLRIAERADMATSDIEKEKLSALAENLVSTLEAVLSTTEDRLDERAKEVESVVKAAAEPESGEFLVPLSAERVNAMQTTLRKLDPISLDEGFLSTVDAWMNKSHQ-DGMDGMVGILQKVLQMYAGTAIVRARSQLQANVGAAVSGQSQEQADKVIAKEEEKGLTPAAALLEKLMAMDTDLWDAELRSNITA----EGGISPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIE 349 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15095.3385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15095.3385.1 >prot_H-elongata_contig15095.3385.1 ID=prot_H-elongata_contig15095.3385.1|Name=mRNA_H-elongata_contig15095.3385.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=283bp MQSDSAGMDTLIDELKAAPDPDTLTLKVSKSVQKVAQPAFFLRIAERAESback to top mRNA from alignment at H-elongata_contig15095:2800..6807- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15095.3385.1 ID=mRNA_H-elongata_contig15095.3385.1|Name=mRNA_H-elongata_contig15095.3385.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4008bp|location=Sequence derived from alignment at H-elongata_contig15095:2800..6807- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15095:2800..6807- >mRNA_H-elongata_contig15095.3385.1 ID=mRNA_H-elongata_contig15095.3385.1|Name=mRNA_H-elongata_contig15095.3385.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1698bp|location=Sequence derived from alignment at H-elongata_contig15095:2800..6807- (Himanthalia elongata Himel1 dioecious)back to top |