mRNA_H-elongata_contig149766.3329.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A6H5L6Q5_9PHAE (SREBP regulating gene protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q5_9PHAE) HSP 1 Score: 174 bits (440), Expect = 3.070e-47 Identity = 135/353 (38.24%), Postives = 159/353 (45.04%), Query Frame = 1
Query: 22 LGPDAIPSTLLYQRRL------PSLPGDIRKG--LVDNT-LDTGIKGGGGTVDRKRG---------CSNTVQGISLLTDSEGRVCRRRDQDPQ---------RPGCCA--------------------------------------ASPHQNGRYLLVKEDGGLEELRSDLDLVGAGA--------SLGPTTEDFPPIEAFFMPFSCWSCDVGKEGSS--------------CCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDF--DEGNIAGHQQPQPPP------HPPV-----KSQRAALLR-----AFDLCAFRCRTYSGSVAHENTYRGPLKHCFGKFRPP 765
LGPDAIPS LL +R P+LPG RK LVD T G GGGG + G C NTVQG +L+ DSEGRVC R + + RPG A+PH + G+E S ++LV G FPP EA PFSCWSCDVG++G S SYEFCVSCCQ+P R +E EAI+ + A +GHPAY D N A +++ PPP H KSQ A R AF CAFRCRTYSGSV HEN+YR PLKHCFG+FRPP
Sbjct: 158 LGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDVTGAVLGDGGGGGEIRGGEGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELIVEEGDDXXVRHRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKHKHPPAAPHSGPATTRTETRRGVEGGVS-VELVELGELAHGXXXXXXXXXXXXFPPEEALSTPFSCWSCDVGEDGPSGNXXXXXXXXXXXXXXSSYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRDLLGPGNNDASNRRELPPPRQLQASHAAAEAGVEKSQEEAEERDAREMAFAHCAFRCRTYSGSVVHENSYRSPLKHCFGRFRPP 509
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: D7FXG4_ECTSI (SREBP regulating gene protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG4_ECTSI) HSP 1 Score: 149 bits (376), Expect = 4.720e-38 Identity = 120/354 (33.90%), Postives = 138/354 (38.98%), Query Frame = 1
Query: 22 LGPDAIPSTLLYQRRL------PSLPGDIRKG--LVDNTLDTGIKGGGGTVDRK-RG---------CSNTVQGISLLTDSEGRVCRRRDQDPQRPGCCAASPHQNGRYLLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPI-----------------------------------------------------EAFFMPFSCWSCDVGKEG--------------SSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDF-DEGN--IAGHQQPQPPPHPPVK------------------SQRAALLRAFDLCAFRCRTYSGSVAHENTYRGPLKHCFGKFRPP 765
LGPDAIPS LL +R P+LPG RK LVD + GGGG R RG C NTVQG +L+ DSEGRVC R + + EA PFSCWSCDVG++G SSCC SYEFCVSCCQ+P R EE EAI+ + A +GHPAY D GN A ++P +R A AF CAFRCRTYSGSVAHEN+YR PLKHCFG+FRPP
Sbjct: 159 LGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDPA--GAVPGGGGGETRGGRGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELVVEEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALSTPFSCWSCDVGEDGPSGSNGGGNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANGREPXXXXXXXXXXXXXEAGGVEKNGQQVEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPP 510
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A7S3UXD3_HETAK (SREBP regulating gene protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXD3_HETAK) HSP 1 Score: 107 bits (267), Expect = 1.290e-23 Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 1
Query: 166 CSNTVQGISLLTDSEGRVCRRRDQDPQRPGCCAASPHQNGRYL--LVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFMPFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGPLKHCFGKFRP 762
CSNTVQG + DSEG VC R +P+ GCC+A + + L K GG + ++ D + +F + +SC+SCD GS CC+ YE CVSCC DP + LE + +++ H Y H P+ F+ C ++CRT SGSV +EN+YR P+K+C+G+ P
Sbjct: 15 CSNTVQGSKFIADSEGYVCFRAYVNPET-GCCSAFYPSEEKKIGKLSKTVGGSSQSDAE-DSSPSQTFSKDLAVNFDQTQPQLGQYSCFSCD---SGSHCCQEYEMCVSCCMDPANRDVLEKFK---SQSTHFVYQ-----------------HTPL---------GFEFCRYKCRTSSGSVQNENSYRNPVKYCYGELLP 181
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: T0QMQ3_SAPDV (SREBP regulating gene protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMQ3_SAPDV) HSP 1 Score: 81.6 bits (200), Expect = 2.440e-14 Identity = 48/124 (38.71%), Postives = 55/124 (44.35%), Query Frame = 1
Query: 391 PIEAFFMPFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGPLKHCFGKFRP 762
P+ A + FSC SC+V CC YE CVSCC P E L + A HP Y A H L F CAFRCRT S SV H+N+YR KHC+G RP
Sbjct: 204 PVAASTVTFSCTSCNVAAP--HCCSEYERCVSCCMSPDHREILRHF-LLHANPAHPVYG-------APHH-----------------LSVFGFCAFRCRTSSASVQHQNSYRSTKKHCYGLHRP 300
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: UPI000771B89A (UPF0454 protein C12orf49 homolog n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B89A) HSP 1 Score: 77.8 bits (190), Expect = 4.590e-13 Identity = 59/195 (30.26%), Postives = 80/195 (41.03%), Query Frame = 1
Query: 166 CSNTVQGISLLTDSEGRVCRRRDQDPQRPGCCAASPHQNGRYLLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFMPFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGP-LKHCF 747
C N+VQG +L+ D G VC R++ P GCC++ QN DG E P I+ +SC SC+ CC YE+CVSCC PG+ + R A + N +++ + R L F +C CRT S SV HENTY+ P KHC+
Sbjct: 103 CRNSVQGKALIVDERGLVCARQEVLPS--GCCSSEQEQNSL------DG----------------------EPRPTIKR--ERYSCESCNA----QGCCAVYEYCVSCCLQPGKIK---------GRRDREADPEHTRTNNKKNRRVED-----TIKHRLRNLDRFQVCLATCRTSSASVRHENTYKDPHSKHCY 247
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A0L7QZ93_9HYME (SREBP regulating gene protein n=1 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7QZ93_9HYME) HSP 1 Score: 75.9 bits (185), Expect = 2.460e-12 Identity = 59/202 (29.21%), Postives = 84/202 (41.58%), Query Frame = 1
Query: 166 CSNTVQGISLLTDSEGRVCRRRDQDPQRPGCCAASPHQNGRYLLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFMPFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRA-EELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGP-LKHCFGKFRPP 765
C N+VQG L+ D G VC R+D P GCC + + + ED T E + SC +C+ CC YE+CVSCC +PG+ + + + + + + + A+ D D V +R L F +C CRT S SV HENTY+ P KHC+ +PP
Sbjct: 113 CRNSVQGKVLIVDERGIVCSRQDILPN--GCC----NMEEKDSIRNED----------------------TATIIKRERY----SCKTCNA----QGCCAIYEYCVSCCLNPGKQIKGRKDVLLGLLKDNNKAHKDQD-----------------VVKKRIRNLDRFQVCLAACRTSSASVRHENTYKDPHSKHCY-TLQPP 260
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A2P6QUA7_ROSCH (SREBP regulating gene protein n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6QUA7_ROSCH) HSP 1 Score: 74.7 bits (182), Expect = 3.500e-12 Identity = 51/155 (32.90%), Postives = 67/155 (43.23%), Query Frame = 1
Query: 283 GRYLLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFMPFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGPLKHCF 747
GRYLL ++G + + S V + P D FSC C+V E CC SYE+CVSCCQDP R + + + V +A+ P + + + + FD CA RCR S SV HEN YR HCF
Sbjct: 43 GRYLLSDDNGHVCDALS----VNPQSRCCPEKGD---------KFSCHGCNVVSE---CCNSYEYCVSCCQDPSRIIKEQVLEVKIAK--------------------------PASAGKYSSV--FDFCAGRCRHNSESVVHENAYRSDFHHCF 153
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A6J0BKG2_NEOLC (SREBP regulating gene protein n=10 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BKG2_NEOLC) HSP 1 Score: 74.3 bits (181), Expect = 6.080e-12 Identity = 62/197 (31.47%), Postives = 83/197 (42.13%), Query Frame = 1
Query: 166 CSNTVQGISLLTDSEGRVCRRRDQDPQRPGCCAASPHQNGRYLLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFMP--FSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGP-LKHCF 747
C N++QG +L+ D G VC R + P GCC+ EE+ A+ T E I+ SC +C+ EG CC +E+CVSCC PG+A E E I+ A ++ E N+ H R L F +C CRT S SV HENTY+ P KHC+
Sbjct: 89 CRNSIQGKALIVDEHGYVCTRGEVLPS--GCCS------------------EEI---------SAANVKTEETDTNIQTLVKRERHSCQTCNA--EG--CCAVFEYCVSCCLRPGKANEPE-IKSAYDQSRRTKKA---EENVFRH--------------RLRTLDRFQVCLATCRTSSASVRHENTYKDPHSKHCY 234
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A3S4R4M0_9ACAR (SREBP regulating gene protein n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S4R4M0_9ACAR) HSP 1 Score: 73.9 bits (180), Expect = 6.140e-12 Identity = 51/155 (32.90%), Postives = 73/155 (47.10%), Query Frame = 1
Query: 292 LLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFMPFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGP-LKHCFGK 753
+L+ +D G R DL + G PTT+ +SCD E CC YE+C+SCC +PG+ L+ I ++R+ H A + G A V A++ F+ C +CRT S SV HEN+YR P KHC+G+
Sbjct: 121 VLIADDKGYVCNRKDLTVGGCCDKSQPTTK-------------LYSCDTCLE-HGCCAIYEYCISCCMEPGKQPLLQKI---ISRSDHGAPL----GGAAS-----------VDVLFASITDHFEFCLAKCRTSSQSVQHENSYRDPKAKHCYGE 243
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Match: A0A6J1GW16_CUCMO (SREBP regulating gene protein n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1GW16_CUCMO) HSP 1 Score: 72.0 bits (175), Expect = 1.100e-11 Identity = 48/159 (30.19%), Postives = 63/159 (39.62%), Query Frame = 1
Query: 283 GRYLLVKEDGGLEELRSDLDLVGAGASLGPTTEDFPPIEAFFM----PFSCWSCDVGKEGSSCCRSYEFCVSCCQDPGRAEELEAIRVAMARAGHPAYVDFDEGNIAGHQQPQPPPHPPVKSQRAALLRAFDLCAFRCRTYSGSVAHENTYRGPLKHCF 747
GRYLL + G + + S F P+ + F C C++ S CC SYE+CVSCCQDP R + + +++ +A+ G AG FD C RCR S SV HEN YR HCF
Sbjct: 44 GRYLLADDSGYVCDASS-----------------FDPMSRCCLGKGEKFPCHGCNLV---SQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPS-------TAGTYAG---------------------VFDFCVGRCRHNSESVVHENAYRSDYHHCF 154 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149766.3329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig149766.3329.1 >prot_H-elongata_contig149766.3329.1 ID=prot_H-elongata_contig149766.3329.1|Name=mRNA_H-elongata_contig149766.3329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=255bp KHERPPGLGPDAIPSTLLYQRRLPSLPGDIRKGLVDNTLDTGIKGGGGTVback to top mRNA from alignment at H-elongata_contig149766:128..892- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig149766.3329.1 ID=mRNA_H-elongata_contig149766.3329.1|Name=mRNA_H-elongata_contig149766.3329.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=765bp|location=Sequence derived from alignment at H-elongata_contig149766:128..892- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig149766:128..892- >mRNA_H-elongata_contig149766.3329.1 ID=mRNA_H-elongata_contig149766.3329.1|Name=mRNA_H-elongata_contig149766.3329.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1530bp|location=Sequence derived from alignment at H-elongata_contig149766:128..892- (Himanthalia elongata Himel1 dioecious)back to top |