mRNA_H-elongata_contig14931.3301.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 3.290e-173 Identity = 291/627 (46.41%), Postives = 387/627 (61.72%), Query Frame = 3
Query: 90 SIWDDKVENSGPANFTGCAFNGNQATDGGAIYSNAGYVMVVKSYFSGNVAGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSLFCGLGEYGFD---NSGEGSDYCRIEVVCSRCNIECNKVPGNITL-DEATVPVCEVVPTGVNRE-KARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGGSNASNYCAKGYAGPYCAVCEEGFTSGFQYNCYICQGSAKWAAVCGAVAVLIAALFMVTLVVVYLVRVEDRLISERSGRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLLSV 1955
S++DD SG N T C F GN A DGGA+YS AGY + F N+A +N+ +C G+YG++ E S CR VVCS C C PG++ + ++A VP+CE TGV+ +T+ L+LLRGYYRTS +SQ+V +CY+ EACIGG++ S YC +GY G YCAVC+EG+ SG+Q++C IC G +A+ +VA+ AL + LV+ LVRV D + + + W + L RD +V+AVPLT+IKIV V WQI+TQ S VV+V YP YE+FLA L+VVN +LG +LS+SC+ + NFY RL T+GP+ V G L+ Y + RN HS M+ K+KHL + F+ F++YSSVS+ IFQTFVC+ +D GV YLRADY L CST HTA M YAG+M LVYPVGIP ++WWL ++R + V L P R D + +DLW YK RYY+EV+ECGRR+AL GLA F+ P S+AQ+AIE + A +F AV ++LSPFA+ D WLYR+GA II+ SMYLALLLKVD +DE + SQ FA +LIAAH GM V+++ +LSV
Sbjct: 439 SLFDDDDPGSGSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNC-LGGAP-RLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSV 1063
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 474 bits (1219), Expect = 1.770e-143 Identity = 331/708 (46.75%), Postives = 424/708 (59.89%), Query Frame = 3
Query: 18 SFKGATFTGNSGIWGGGVAHFSSG---------------------------SIWDDK--------------------------------VENSGPANFTGCAFNGNQAT-DGGAIYSNAGYVMVVKSYFSGNVAGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSLFCGLGEYGFDNSGE-----GSDYCRIEVVCSRCNIECNKVPGNIT--LDEATVPVCEVVPTGVNREKARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGGSNASNYCAKGYAGPYCAVCEEGFTSGFQYNCYICQGSAKWAAVCGAVAVLIAALFMVTLVVVYLVRVEDRLISERSGR--WERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLV 1934
+FK A FT NS +WGG VA FSSG S +D + + S P F C F N A DGGA+YS A + M+ S F N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +N +C GE+G + + G+D CR VCSRC EC+ + +D T+P CE P G + T+ TL++L G+YR+S S D+REC+ +AC GGS YCA+GY GPYCAVC G++ G+ C C G +K +A+ A A+ AL V +V LV V + ++ G W R ++ V + VPLT +KIV V WQI+TQ S V VEYP AY++FL+ + VVNL+LG ILS +CV++TNFY+RL++ATIGP+ VLG L Y A RN H AMR V+ +HL V F++F++Y++VSYTIF+TFVCD +D G +YLRADY L C T HTA+ YAG+ LVYPVGIP F WWLF +R ++ D S+ L+ A DLW PYK + YYYEVVEC RR+AL G AVFIYP SSAQ+AI L A +F V EILSPFA ++ WLYR+G +++ SMYLALLL+VDV+DE + SQ +F+ +++ AH M V+V
Sbjct: 331 TFKNANFTRNSALWGGAVALFSSGGSASSSSFSSASGSTSKSREIAILTSGSGYDPEDLTPSLTTXXXXXXXXXXXXXXXXXXXXXXGEEDPSTPVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRP----------AADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVV 1028
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 3.660e-140 Identity = 329/718 (45.82%), Postives = 423/718 (58.91%), Query Frame = 3
Query: 18 SFKGATFTGNSGIWGGGVAHFSSGSIWDDKVENS--------------------------------------------------------GPAN---FTGCAFNGNQAT-DGGAIYSNAGYVMVVKSYFSGNVAGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSLFCGLGEYGFDNSGE-----GSDYCRIEVVCSRCNIECNKVPGNIT--LDEATVPVCEVVPTGVNREKARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGGSNASNYCAKGYAGPYCAVCEEGFTSGFQYNCYICQGSAKWAAVCGAVAVLIAALFMVTLVVVYLVRV-------EDRLISERSGRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLL 1949
+FK A FT NS +WGG VA FSSG +S GP+ F C F N A+ DGGA+YS A + ++ S FS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N +C GE+G + + G+D CR VCSRC EC +D T+P CE P G + T+ TL++L G+YR+S S D+REC+ +AC GGS YC++GY GPYCAVC G++ G+ C C G++K +A+ A A+ + AL V ++V LV V + S W R + V + VPLT +KIV V WQI+TQ S V +EYP AY++FL+ + VVNL+LG ILS +CV++TNFY+RL++ATIGP+ VLG L Y A RN H AMR V+ +HL V F++F++Y++VSYTIF+TFVCD +D G +YLRADY L C T HTA+ YAG+ LVYPVGIP F WWLF +R ++ D + L+ A DLW PYK + YYYEVVEC RR+AL G AVFIYP SSAQ+AI L A +F V EILSPFA ++ WLYR+G +++ SMYLALLL+VDV+DE + SQ +F+ +++ AH M V+V+ LL
Sbjct: 307 TFKNANFTRNSALWGGAVALFSSGGSASSSSLSSASGSTSESREIAILTSSSGYDPENLTPSLTXXXXXXXXXXXXXXXXXXXXXXXGEGGPSTTVKFLDCLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRP----------AADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 457 bits (1176), Expect = 2.610e-138 Identity = 314/615 (51.06%), Postives = 399/615 (64.88%), Query Frame = 3
Query: 123 PANFTGCAFNGNQAT-DGGAIYSNAGYVMVVKSYFSGNVAGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSLFCGLGEYGFDNSGEGSDYCRIEVVCSRCNIEC-NKVPGNITL-DEATVPVCEVVPTGVNREKARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGGSNASNYCAKGYAGPYCAVCEEGFTSGFQYNCYICQGSAKWAA--VCGAVAVLIAALFMVTLVVVYLVRVEDRLISERS-GRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLL 1949
P F C F N A+ DGGAIYS AG+ MV S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S +C G + + EG D CR +VCSRC EC +++ +T+ D +P CE VP G T+ TL++L GYYR+S S D+REC+ +AC GG YCA GY GPYCAVC GF+ G+ ++C C G ++ A V AV VL+ L V + LV V + S ++ RW++ ++ + + +PLT IKIV V WQI+TQ S V VEYP AY++FL+ + VVNL+LG ILSL+CV +T+FY+RL+L TI P VLG L Y AM VVK++HL V F++F++Y++VSYTIF+TFVCD +D G +YLR+DY L C T+THTA+ YAG+M LVYPVGIP F WWLF R ++ Q ER + A DLW PYK + YYYEVVEC RR+AL G AVFIYP SSAQ+AI L A++F V E LSPFA ++ WLYR+G +++ SMYLALLL+VDV+DE N SQ +F+ +L+ AH M V+V+ LL
Sbjct: 436 PTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEIEGEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLV--LLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL-----------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELK----------QEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 428 bits (1100), Expect = 9.500e-133 Identity = 237/519 (45.66%), Postives = 322/519 (62.04%), Query Frame = 3
Query: 384 NNSLFCGLGEYGFDNSGEGSDYCRIEVVCSRCNIECNKVPGNITLDEATVPVCEVVPTGVNREKARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGGSNASNYCAKGYAGPYCAVCEEGFTSGFQYNCYICQGSAKWAAVCGAVAVLIAALFMVTLVVVYLVRVEDRLISERSGRWERWLLG-FRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVI 1937
+N+L C GE +D E D CR E+ C+RC+ +C+ +P ++T+ ++T+PVC G + TV TLDL GYYRTS +SQ V ECY + AC GG++ NYCA GY GPYC+VC +G+ G Y C+ C G++ +AV A +V LVRV D S + R + L F VV A PLTT+KIV V WQIITQ + YP Y++FL AL+ VNL++G ILS SCV T+F++RL++ATIGP+ VL L++ + RN S A+R VKNKHL F++F +YSSVS+T+FQTFVCD +D GV+YLRADY L C T + AF YA +M VYP+GIPA FAW L ++R ++ D LQ DLW YK +RYYYE++E RR+ L G+AVF+ PGSSAQ+A+ L AV+F + E LSPF +D LYR G ++ S+Y+ALLLKV+V++EG+ + + F +LI A+ MA LV+
Sbjct: 514 SNTLNCPPGENAYDKEAE-DDSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQP----------LGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVV 1021
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.160e-118 Identity = 200/385 (51.95%), Postives = 264/385 (68.57%), Query Frame = 3
Query: 852 VTLVVVYLVRVEDRLISERSGRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLLSVLTDGTEVEVVEVSIPVR 2006
V LV+ LVRV D + + L R+ + +PLT+IKIV V WQI+TQ S VV+V YP YE FL+ L++VN N G ILS SCV +TNFY RL+ ATIGP+ VLGAL++ Y + RN HS ++ K+KHL + F++F++YSSVS+ IFQTFVC+ +D GV YLRADY L CSTDTHTA YAG+M VYP GIPA F WL ++R + VD + G + + + +DLW PYK RYY+EVVECGRR+AL GLAVFIYPGS+AQ+A+E +FA F + ++LSPFA+ LDAWLYRSGA +I++SM+L LLLKVD +DE + SQ +FA LLI+AH GM + + +LSV G+ V + + IP++
Sbjct: 22 VALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVD--ANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSV--KGSLVAMRDQPIPIQ 402
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 372 bits (954), Expect = 3.590e-118 Identity = 207/406 (50.99%), Postives = 268/406 (66.01%), Query Frame = 3
Query: 858 LVVVYLVRVEDRLISERS--GRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLLSVLTDGTEVEVVEVSIPVRNVS*PTRSAPSGERTILVLEE 2069
LV+V LVRV D +S G+WER+L RD + A+PLT IKI+ V WQI+TQ + VV VEYP YE FLAAL++VN NLG LS C+ ETNFY RL +TI P+A+LG L+ + A N HS MR +KHL + F++F +YSSVS+TIFQTF+C+ +D V YLRADY L CST THT YAG+M LVYP+GIPA FAWWL ++R + R G + PE + KDLW PYK RY+YE+VECGRR+ L GLAVF++PG++AQ+AIE FA VFE+L+PF + +DAWLYRSGAL+++ SMYLALLLKVD +DE + SQ +FA +L+AAH M +++ LLS G E +V + V+ TRS+ T+ EE
Sbjct: 3 LVIVDLVRVVDDGDGTKSRVGKWERFL-SCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQ----DRSGGTTTPENLRPM---KDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPVARNTRSSWRASETLGAEEE 400
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 339 bits (870), Expect = 4.770e-107 Identity = 180/344 (52.33%), Postives = 232/344 (67.44%), Query Frame = 3
Query: 918 WERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLL 1949
W + L R+ + VPLT+IKIV V WQI+TQ S V++V YP YE FL+ L+VVN NLG ILS+SC+ ++NFY ATI P+ V GA +V Y + RN HS M+ K+KHL + F++F++YSSV + IFQTFVC+ +D+G+ YLRADY L C T H A M YAG+M VYPVGIPA +AWWL R + V P+ L+ PE D + +DLW PYK +RYY+EVVECG R+AL GLA F+ P S+AQ AIE + A +F AV ++LSPF + DAWLYR G I SMYLAL VDV+DE N SQ +FA +LIAAH GM +V+V+ +L
Sbjct: 9 WGKRLTSCRERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNF-LERVPE-LDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLAL---VDVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 362 bits (928), Expect = 4.050e-106 Identity = 238/639 (37.25%), Postives = 338/639 (52.90%), Query Frame = 3
Query: 21 FKGATFTGNSGIWGGGVAHFSSGSIWDDK-VENSGPANFTGCAFNGNQAT-DGGAIYSNAGYVMVVKSYFSGNVAGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSLFCGLGEYGFDNSGEGSDYCRIEVVCSRCNIECNKVPGNITLDEATVPVCEVVPTGVNREKARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGG-SNASNYCAKGYAGPYCAVCEEGFTSGFQYNCYICQGSAKWAAVCGAVAVLIAALFMVTLVVVYLVR---VEDRLISERSGRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVFETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRVVKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAKDLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGM 1919
F GA F NS GG V+ SG++ ++ + P F C F N+AT GGAI S AG V S F GN AG N C G Y D + G+ Y E C C C+ + P C V + +T++ L + RGY+R S S++V CY S+AC+GG + + YC KGY GPYCAVC +G+T+ + C C G A G +A L A L +V L V + V + R+ RSG R LG + +PL ++KIV V WQI+TQ + V +V YP Y+ FL L V N +L +LS C+F+ +F++RL+ +T+ P+ L L+ Y AV N +++V+ NKH+ +V L F++YSSVS T+F+ FVC+ ++ G YLRADY ++C + H AF YAG M +VY VGIPA +A+ LF DR +++ ++ E+ + DLW PYK + +YYEV+ECGRR+ LAG+ VFI+P ++AQIAI + A F V E L+PFA+ DAWL R+G ++++SMY+ALLLKVDV+ E SQ ++ +L+AAH M
Sbjct: 615 FTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGT-GGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMY-LDYNASGNPY---EAACGGCETACD----GCFFEPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGA------GRIA-LAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVAR--LG------QYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKD--------HHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACM 1221
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 355 bits (912), Expect = 5.580e-105 Identity = 236/661 (35.70%), Postives = 344/661 (52.04%), Query Frame = 3
Query: 123 PANFTGCAFNGNQATDG--GAIYSNAGYVMVVKSYFSGNVAGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSLFCGLGEYGFDNSGEGSDYCRIEVVCSRCNIECNKVPGNITLDEATVPVCEVVPTGVNREKARITVDTLDLLRGYYRTSNQSQDVRECYKSEACIGG-SNASNYCAKGYAGPY-----CAVCEEGFTSGFQYNCYICQGSAKWAAVCGAVAVLIAALFMVTLVVVYLVRVEDRLISERSGRWERWLLGFRDMVVRAVPLTTIKIVAVTWQIITQISGVVSVEYPPAYENFLAALSVVNLNLGSILSLSCVF-ETNFYERLVLATIGPIAVLGALSVIYRYAVIRNGHSIRAMRV--VKNKHLFVVRFLLFILYSSVSYTIFQTFVCDLMDSGVAYLRADYGLECSTDTHTAFMTYAGIMALVYPVGIPAAFAWWLFTDRDSIENVDNPSRMGLQSEPERFDAVDAAK--DLWVPYKRNRYYYEVVECGRRLALAGLAVFIYPGSSAQIAIEALFAVMFYAVFEILSPFANSLDAWLYRSGALIIYLSMYLALLLKVDVADEGNYSQTIFAWLLIAAHGGMASVLVIYVLLSVLTDGTEVEVVEVSIPVRNVS*PTRSAPSGERTILVLE 2066
PA F+GC F N+A+ G GA+ + +G + F GN A V N L+C G Y D GE S R E VC C EC+ ++T T P CE+ + +T++TLD+ GY+R +++S + CY ++AC GG + A ++CA GY GP C+VCE GF + C C S + + AV + A+F + + YL+ E + E + F ++RAVP+ T+KI+ V WQI+TQ + V ++ YP AY++FL+A+ VVN +LGS L+ C++ + +F++RL+L T+GP+ +G L + YR AV RNG + ++KHL + L F++YSSVS T+FQTF C+ +D G+ YLR DY + C+ H AF YAGIM +VYPVGIP +A LF RD + + R D A LW PY+ R+YYEV+ECGRR+ L G+ FI+P +AQIAI L A F VFE++SP+ + D WL R G +I++LSM+ ALLLKVDV+ E SQ +FA + +A H + +V+ V+ L G + VE ++P + P G + V E
Sbjct: 441 PATFSGCKFFDNKASGGTGGAVETLSGRQEFISCDFEGNSAYV---GGAMRLGGTVDVRNCSFLSNSATSRGLAIAVVAFANISGASFDRNELYCEAGLYREDTEGEPS--ARFETVCLDCP-ECDDC--HVTRSSVT-PACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTE---VDEGNAGC------FHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDA-------------RADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLASGKK-RGVEEAVPSEGL--PVLRPRGGSDDVPVFE 1067 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14931.3301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14931.3301.1 >prot_H-elongata_contig14931.3301.1 ID=prot_H-elongata_contig14931.3301.1|Name=mRNA_H-elongata_contig14931.3301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=668bp MSFKGATFTGNSGIWGGGVAHFSSGSIWDDKVENSGPANFTGCAFNGNQAback to top mRNA from alignment at H-elongata_contig14931:2322..6163- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14931.3301.1 ID=mRNA_H-elongata_contig14931.3301.1|Name=mRNA_H-elongata_contig14931.3301.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3842bp|location=Sequence derived from alignment at H-elongata_contig14931:2322..6163- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14931:2322..6163- >mRNA_H-elongata_contig14931.3301.1 ID=mRNA_H-elongata_contig14931.3301.1|Name=mRNA_H-elongata_contig14931.3301.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4008bp|location=Sequence derived from alignment at H-elongata_contig14931:2322..6163- (Himanthalia elongata Himel1 dioecious)back to top |