mRNA_H-elongata_contig147525.3220.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: D8LDM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM0_ECTSI) HSP 1 Score: 132 bits (331), Expect = 2.550e-34 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLRSR 252
G+VTPEEWCRYY+MLSA + NDD+FELMMRNAWHLPGG GA+++T+ RRVL TRADGSQT+EEVKG G ++DKKA+L SLRS+
Sbjct: 408 GKVTPEEWCRYYSMLSAGMPNDDDFELMMRNAWHLPGGVGAMASTTGRRVLATRADGSQTIEEVKGAAGMGNSDKKAMLNSLRSQ 492
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A7S2UU94_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU94_9STRA) HSP 1 Score: 100 bits (248), Expect = 9.490e-23 Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLR 246
G+VTP EWCRYY ++SASI DD FELM+RNAWH+ GG G +N++ +RVLV ADG QTVEE++ G DK A++Q+L+
Sbjct: 400 GKVTPAEWCRYYGLISASIDEDDYFELMIRNAWHMSGGEGWCANSTCKRVLVNHADGKQTVEEIQNDLGMKPDDKDAMMQALK 482
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A067C837_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C837_SAPPC) HSP 1 Score: 97.4 bits (241), Expect = 8.200e-22 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSL 243
G+VTP+E+ RYYA +SASI +DD FELM+RNAWH+ GG G +N++ RRVLVT DG+QTVEEVK G S+TDK AI +L
Sbjct: 417 GKVTPDEFIRYYANVSASIDDDDYFELMIRNAWHISGGEGWCANSTCRRVLVTHPDGTQTVEEVKNDIGISATDKAAINANL 498
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A1W0A9S5_9STRA (Ribosome assembly protein 3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9S5_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.720e-21 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSL 243
G+VTP+E+ RYYA +SASI +DD FELM+RNAWH+ GG G +NT+ RRVLVT ADG QTVEEVK G SS D AI +L
Sbjct: 408 GKVTPDEFIRYYANVSASIDDDDYFELMIRNAWHISGGEGWCANTTCRRVLVTHADGRQTVEEVKNDIGVSSKDTAAINANL 489
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A1V9ZGF5_9STRA (Calcyphosin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGF5_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.900e-21 Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLRSR 252
G+VTP+E+ RYYA +SASI +DD FELM+RNAWH+ GG G +N++ RRVLVT DG+QTVEEVK G ++ DK+AI +L+++
Sbjct: 420 GKVTPDEFIRYYANVSASIDDDDYFELMIRNAWHISGGEGWCANSTCRRVLVTHPDGTQTVEEVKNDIGIAADDKEAINANLKAQ 504
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A6G0W894_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W894_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.900e-20 Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLRSR 252
G+VTP E+ RYYA +SASI NDD FELM+RNAWH+ GG G +NT+ RRVLVT ADG+QT+EEVK G T K AI +L+++
Sbjct: 423 GKVTPAEFIRYYANVSASIDNDDYFELMIRNAWHISGGEGWSANTTCRRVLVTHADGTQTIEEVKNDIGI--TGKDAIAAALQAQ 505
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A662XRY8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRY8_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.130e-20 Identity = 48/85 (56.47%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLRSR 252
G+V P E+ RYYA +SASI +DD FELM+RNAWH+ GG G ++NT+ RRVLVT ADGS TVEEVK G + + +AI +L+++
Sbjct: 114 GKVHPNEFVRYYANVSASIDDDDYFELMIRNAWHMSGGEGWVANTTCRRVLVTHADGSHTVEEVKDDIGIEAGNVEAIRANLQAQ 198
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A7S2F297_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F297_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.010e-20 Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLR 246
G+VT +E+ YY + AS+ +DD FELM+RNAWH+ GG G SNT+ RRVLVT DG QTVEE+K G S DK+ +LQ L+
Sbjct: 57 GKVTLKEFQNYYENIGASVPDDDYFELMIRNAWHISGGTGWCSNTANRRVLVTHTDGRQTVEEIKDDLGLSPDDKEGMLQRLQ 139
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A8K1FM79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM79_PYTOL) HSP 1 Score: 91.7 bits (226), Expect = 9.100e-20 Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLRSR 252
G+V P E+ RYYA +SASI +DD FELM+RNAWH+ GG G NT+ RRVLVT ADG QTVEEVK G S+ + +AI +L+++
Sbjct: 409 GKVYPNEFIRYYANVSASIDDDDYFELMIRNAWHISGGEGWCENTTCRRVLVTHADGRQTVEEVKNDIGISANNVEAIRANLQAQ 493
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Match: A0A7S2UVF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVF3_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.200e-19 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 1 GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGG-GALSNTSARRVLVTRADGSQTVEEVKGVPGSSSTDKKAILQSLR 246
G+VT EE+ YYA + ASI NDD FELM+RN WHL GG G +NT+ RRVLVT ADG QTVEE+K G D+ + + L+
Sbjct: 2 GRVTLEEFQNYYANVGASIDNDDYFELMIRNCWHLSGGEGWCANTANRRVLVTHADGRQTVEEIKDDLGVRKDDQATMRRMLK 84 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147525.3220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147525.3220.1 >prot_H-elongata_contig147525.3220.1 ID=prot_H-elongata_contig147525.3220.1|Name=mRNA_H-elongata_contig147525.3220.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp GQVTPEEWCRYYAMLSASITNDDEFELMMRNAWHLPGGGALSNTSARRVLback to top mRNA from alignment at H-elongata_contig147525:948..1464- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147525.3220.1 ID=mRNA_H-elongata_contig147525.3220.1|Name=mRNA_H-elongata_contig147525.3220.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=517bp|location=Sequence derived from alignment at H-elongata_contig147525:948..1464- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147525:948..1464- >mRNA_H-elongata_contig147525.3220.1 ID=mRNA_H-elongata_contig147525.3220.1|Name=mRNA_H-elongata_contig147525.3220.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig147525:948..1464- (Himanthalia elongata Himel1 dioecious)back to top |