mRNA_H-elongata_contig147260.3205.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: D7FWH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH0_ECTSI) HSP 1 Score: 317 bits (811), Expect = 2.530e-108 Identity = 149/188 (79.26%), Postives = 171/188 (90.96%), Query Frame = 1
Query: 28 MRWWRE-----GHPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKEGRSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFVGFERGKALFLDN 576
MRWWR+ G + P LGPLDKLRLELDEVW +GA+VRKN+ G++FLAGVARVMRGP+RY++GFMHVDELAPMVE+RGTFSANVYLKVPPTGGELA+WPLA+RSRWDF+RHAETLS+LTVQGE GQALLR++LPPPR+IKVAPGDLV++C QRPHAAQGFPMGTRVSVQSF+ FE+GKAL LDN
Sbjct: 1 MRWWRDNGGEAGQQQHQSPLLGPLDKLRLELDEVWPEGASVRKNEAGKAFLAGVARVMRGPTRYVEGFMHVDELAPMVESRGTFSANVYLKVPPTGGELAVWPLAVRSRWDFFRHAETLSHLTVQGEEGQALLRRKLPPPRVIKVAPGDLVLLCVQRPHAAQGFPMGTRVSVQSFLTFEKGKALLLDN 188
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A836CMD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD3_9STRA) HSP 1 Score: 234 bits (597), Expect = 4.790e-74 Identity = 114/191 (59.69%), Postives = 143/191 (74.87%), Query Frame = 1
Query: 1 AYFNSALAHMRWWREGHPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKEGRSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFVGFERGKALFLD 573
AYF +A A R R G PP L P+D+LRLELDE+W GA ++ GR+FL G+ R+MRGP+R + GF+HVD+LAP+ RG FSAN YL++PP GG LA++PLA+R+RWDFYRHA TLS L QG Q LR+ LPPP ++ APGDLV++CAQRPHAA+GFP+GTRVS+QSFV ERG+AL LD
Sbjct: 119 AYFAAARALQRRLRAPPAPGAPPLLPPIDQLRLELDELWPHGARAARDARGRAFLPGLPRIMRGPTRSLAGFVHVDDLAPLRAARGLFSANAYLRMPPAGGALAVYPLAVRTRWDFYRHAATLSGLMGQGAAAQDALRRALPPPLRVRPAPGDLVLLCAQRPHAAEGFPVGTRVSMQSFVTHERGQALTLD 309
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: W7TSJ1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ1_9STRA) HSP 1 Score: 219 bits (559), Expect = 3.380e-68 Identity = 112/207 (54.11%), Postives = 151/207 (72.95%), Query Frame = 1
Query: 1 AYFNSALAHMRWWREGHPEGNP-------------PPLGPLDKLRLELDEVWSDGATVRKN-KEGRSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGG-ELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFVGFERGKALFLDN 576
AYF+ ALA MR REG + P LGPLDKLRLELDE++ GATV K+ K+GR F+AG+ARVM+GP+R+++GF+H D++ P+ + G FSAN+YL++P TGG EL ++ L +RSR++FY++A TL+ LT GE GQ +LR RLP P++IK GDL++ICAQRPHA GFP+GTRVS+QSF+ ++GK L LDN
Sbjct: 112 AYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHKKGKPLQLDN 318
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A7S2F4Q8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4Q8_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.280e-62 Identity = 104/202 (51.49%), Postives = 134/202 (66.34%), Query Frame = 1
Query: 4 YFNSALAHMRWWREG-----HPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKE-GRSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPP-----PRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFVGFERGKALFLDN 576
Y + A A + W+R G H E L PLDKLRLELDE W+ GATV K++ GR FL GV R+ GP+ DGF+HVD+LAP+ + +G FSAN+YL+VPP GGEL +WP+A+R+ WDFYRHA+TLS LTV Q LR L P ++ GDL+++C QRPHA QG PMG+RVS+QSF+ + + L LDN
Sbjct: 54 YLDDAEASINWFRYGPASSRHIEEGTLRLSPLDKLRLELDEQWAHGATVLKDQRTGRPFLPGVGRITHGPTLGPDGFIHVDDLAPLTKQKGLFSANIYLEVPPQGGELQIWPVALRNNWDFYRHADTLSMLTVPDLPMQRRLRSILQELDGGSPLVVHPEVGDLILLCVQRPHAVQGIPMGSRVSIQSFITHVQNQPLVLDN 255
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A2R5GMH1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMH1_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.560e-58 Identity = 101/199 (50.75%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 1 AYFNSALAHMRWWREGHPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKEG--RSFLAGVARVMR-----GPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMG-TRVSVQSFVGFERGKALFLD 573
AYF +++ MR WR H E +GP+DK RLELDE+W++G + + K G + F AGV R+MR P+R+ GF HVDELA M +RG FSAN+YL+ P+GGEL +WP+ SRWDFYR+A TLS +Q QA LR+RLP P +KV PGDLV+IC QRPH +G +G RVS+Q F+ +ERG+ L L+
Sbjct: 121 AYFGNSVEAMRKWRY-HREDGVLAMGPMDKFRLELDEIWTEGCLLSREKGGDRQPFQAGVPRIMRPASRYDPARWTRGFAHVDELAIMSPDRGLFSANIYLRNAPSGGELQIWPVTFASRWDFYRNAPTLSLALLQDAQAQAALRERLPDPVTVKVRPGDLVLICTQRPHGVRGPVVGGPRVSIQGFLQYERGQPLRLE 318
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: K8Z8S2_NANGC (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z8S2_NANGC) HSP 1 Score: 197 bits (501), Expect = 1.930e-56 Identity = 102/196 (52.04%), Postives = 139/196 (70.92%), Query Frame = 1
Query: 1 AYFNSALAHMRWWREGHPEGNP-------------PPLGPLDKLRLELDEVWSDGATVRKN-KEGRSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGG-ELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFVG 543
AYF+ ALA MR REG + P LGPLDKLRLELDE++ GATV K+ K+GR F+AG+ARVM+GP+R+++GF+H D++ P+ + G FSAN+YL++P TGG EL ++ L +RSR++FY++A TL+ LT GE GQ +LR RLP P++IK GDL++ICAQRPHA GFP+GTR ++ G
Sbjct: 78 AYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRGAMAIATG 273
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A8J2T3U8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T3U8_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.270e-51 Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 1
Query: 4 YFNSALAHMRWWREGHPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKEGRSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMG-TRVSVQSFVGF 546
YF + + + W P G+ LD+LR +LD+ W G + +K+ GR+ G+ RVM GP+++ GF+HVDELAPM ++G FSAN+YLK+P GG L LWPL +RW+FY +A TLS L E Q LR RLPPP +++VAPGDLV++ QRPHA QG+ G +R S+QSFV F
Sbjct: 119 YFVEDVPNAKKWVRSLPGGDA-----LDRLRCDLDDAWPGGCSAKKDDAGRAHHVGLGRVMAGPTQWSQGFVHVDELAPMSPSKGHFSANLYLKLPSEGGHLELWPLQFENRWEFYTNAHTLSKLVSIDEDAQRELRARLPPPIVLEVAPGDLVMLSVQRPHAVQGWTSGDSRASLQSFVNF 295
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A7S2ENC7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENC7_TRICV) HSP 1 Score: 176 bits (447), Expect = 4.070e-51 Identity = 91/166 (54.82%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 67 PPLGPLDKLRLELDEVWSDGATVRKNKEG--RSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPPTG----GELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFVGF 546
P L P+DKLRLELDE W GA + + EG R F G+ RVM GP+R+ GF+HVDELAP+ E RG FSAN+YL++P + G+L +WPL +RSRWD+Y++A LS LT Q Q LR L P+++KV PGDLV++C QRPHAA GF GTRVS+Q FV +
Sbjct: 161 PRLWPMDKLRLELDEAWPGGAGLARETEGSKRPFGGGLPRVMAGPTRWQRGFIHVDELAPLSEVRGLFSANIYLQLPCSSESDEGDLHIWPLGVRSRWDWYKNAILLSGLTSQDAEMQVRLRSDLGTPKVVKVEPGDLVLLCVQRPHAAVGFRNGTRVSLQCFVQY 326
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A7S2WJU7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJU7_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.460e-50 Identity = 86/168 (51.19%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 67 PPLGPLDKLRLELDEVWSDGATVRKNKEG--RSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPP--------TGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSFV 540
P L PLDK RLELDE W GA + + G R F AG+ R+M GP+R+ G++HVDE+AP+ EN G FSAN+YL++P G+L +WPL +RSRWD+Y++A LS L+ Q Q LRK L P++I++ PGDLV++C QRPHAA GF GTRVS+Q F+
Sbjct: 160 PQLWPLDKFRLELDEAWHGGAGLARESGGDKRPFSAGLPRIMFGPTRWNRGYIHVDEMAPLSENEGLFSANIYLQLPEHSSSSENFNDGDLIIWPLGIRSRWDWYKNAILLSGLSTQDPESQVRLRKELGEPQIIRLEPGDLVLLCVQRPHAAIGFDKGTRVSLQGFI 327
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Match: A0A7S2UCX0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCX0_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.690e-49 Identity = 90/184 (48.91%), Postives = 118/184 (64.13%), Query Frame = 1
Query: 4 YFNSALAHMRWWREGHPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKEG--RSFLAGVARVMRGPSRYIDGFMHVDELAPMVENRGTFSANVYLKVPP----TGGELALWPLAMRSRWDFYRHAETLSYLTVQGEYGQALLRKRLPPPRLIKVAPGDLVVICAQRPHAAQGFPMGTRVSVQSF 537
YF +R R+GH L PLDK RLELDE W +GA + + G R F G+ RVM GP+R+ GF+HVDE+ P+ +RG FSAN+YL++P + G L +WPL +RSRWD+Y++A LS L++Q Q LR L P++I V PGDLV++C QRPHAA GF GTRVS+Q F
Sbjct: 129 YFEGVQTELRNRRQGHDS-----LWPLDKFRLELDEAWPEGAGLARETGGKKRPFSGGLPRVMLGPTRWKKGFIHVDEMGPLHPSRGLFSANIYLQLPDDTDASSGALHVWPLGIRSRWDWYKNALLLSGLSMQDPEMQVRLRSELLEPQIIHVEPGDLVLLCVQRPHAAVGFKTGTRVSLQCF 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147260.3205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147260.3205.1 >prot_H-elongata_contig147260.3205.1 ID=prot_H-elongata_contig147260.3205.1|Name=mRNA_H-elongata_contig147260.3205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp MRWWREGHPEGNPPPLGPLDKLRLELDEVWSDGATVRKNKEGRSFLAGVAback to top mRNA from alignment at H-elongata_contig147260:123..701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147260.3205.1 ID=mRNA_H-elongata_contig147260.3205.1|Name=mRNA_H-elongata_contig147260.3205.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=579bp|location=Sequence derived from alignment at H-elongata_contig147260:123..701+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147260:123..701+ >mRNA_H-elongata_contig147260.3205.1 ID=mRNA_H-elongata_contig147260.3205.1|Name=mRNA_H-elongata_contig147260.3205.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig147260:123..701+ (Himanthalia elongata Himel1 dioecious)back to top |