mRNA_H-elongata_contig147201.3200.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: D7FI93_ECTSI (DNA replication licensing factor MCM7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI93_ECTSI) HSP 1 Score: 151 bits (382), Expect = 4.070e-41 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2
Query: 2 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQDAKNGD 229
ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEP+VPEELTSYIVEAYVALRA+SGQDAKNGD
Sbjct: 533 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPHVPEELTSYIVEAYVALRAQSGQDAKNGD 608
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A835YVG8_9STRA (DNA replication licensing factor MCM7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.510e-22 Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = 2
Query: 2 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALR 196
ADME+D ALARHVT+VHQ NPELDF P DP F+K YISQAR +EPY+P EL Y+VEAYV LR
Sbjct: 533 ADMETDTALARHVTYVHQHGANPELDFVPLDPTFIKHYISQARTVEPYIPAELAPYVVEAYVELR 597
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A812Y919_9DINO (DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Y919_9DINO) HSP 1 Score: 92.4 bits (228), Expect = 5.570e-21 Identity = 40/74 (54.05%), Postives = 57/74 (77.03%), Query Frame = 2
Query: 5 DMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQDAKNG 226
D ++D+ALARH+T+VHQ++ +PELDF+P ++++ +AR LEPYVP+ LTSYIVE YVALR E + A +G
Sbjct: 83 DADNDLALARHITYVHQYEHHPELDFDPVASGVFRVFVEKARQLEPYVPKSLTSYIVEQYVALRTEEAKQASSG 156
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A7J7IG98_9RHOD (DNA helicase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG98_9RHOD) HSP 1 Score: 83.2 bits (204), Expect = 1.510e-18 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 2
Query: 5 DMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQ 211
D + D+ALARHVT+VH+ + P+L F+P P L+ YI+QAR P VP ELTSYIVE YVALRA+ Q
Sbjct: 20 DQDKDMALARHVTYVHRTGEAPDLGFQPVSPDLLRAYIAQARQSTPVVPSELTSYIVEHYVALRADDTQ 88
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: M1V6T0_CYAM1 (DNA replication licensing factor MCM7 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6T0_CYAM1) HSP 1 Score: 83.6 bits (205), Expect = 4.850e-17 Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 2
Query: 5 DMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQ 211
D + D+ALARHVT+VH+ + PEL FEP P L+ Y++QAR P VP ELT+Y+VE YVALRA+ Q
Sbjct: 628 DQDKDLALARHVTYVHRTGEAPELGFEPASPDLLRAYVAQARQCVPVVPSELTAYVVEHYVALRADDKQ 696
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A8K1FIE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIE6_PYTOL) HSP 1 Score: 82.0 bits (201), Expect = 1.690e-16 Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 2
Query: 2 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQD 214
A+ E D ALARHVT+VH+F KNP++ FEP P+ L+ +I+ A+ +P +PE L SYIVEAYV+LR + +
Sbjct: 580 ANYEKDEALARHVTYVHRFSKNPDMTFEPVRPEVLRYFIAIAKQYQPTIPEHLCSYIVEAYVSLRQQDANE 650
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A7S0JYJ4_CAFRO (DNA replication licensing factor MCM7 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JYJ4_CAFRO) HSP 1 Score: 81.6 bits (200), Expect = 2.300e-16 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 2
Query: 5 DMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQDAKNG 226
DM++D+ALA+H+T+VHQ ++P LDFEP +P L+ Y+ AR+LEP VP L +I EAYV +R A G
Sbjct: 621 DMDNDLALAKHITYVHQNAQHPPLDFEPVEPSVLRSYVQAARVLEPAVPRSLQGFIAEAYVGMRQREAAGAAKG 694
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A2K1JVY1_PHYPA (DNA replication licensing factor MCM7 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVY1_PHYPA) HSP 1 Score: 81.3 bits (199), Expect = 3.130e-16 Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 2
Query: 2 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALRAESGQ 211
ADM+SD+A+ARHV VHQ P LDF P D L+ YIS AR + PYVP +LT Y+ AY ALR E Q
Sbjct: 521 ADMDSDLAMARHVLHVHQHSAPPSLDFTPLDSSTLRAYISSARQVIPYVPRDLTEYMASAYSALRQEEAQ 590
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A2D4CAX7_PYTIN (DNA replication licensing factor MCM7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAX7_PYTIN) HSP 1 Score: 81.3 bits (199), Expect = 3.130e-16 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 2
Query: 2 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALR 196
A+ E D ALARHVT+VH+F KNPE+ FEP P+ L+ +I+ A+ +P +PE L SYIVEAYV+LR
Sbjct: 498 ANYEKDEALARHVTYVHRFCKNPEIGFEPVRPEVLRYFIAIAKQYQPSIPEHLCSYIVEAYVSLR 562
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Match: A0A2D4BFW7_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFW7_PYTIN) HSP 1 Score: 81.3 bits (199), Expect = 3.140e-16 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 2
Query: 2 ADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQARMLEPYVPEELTSYIVEAYVALR 196
A+ E D ALARHVT+VH+F KNPE+ FEP P+ L+ +I+ A+ +P +PE L SYIVEAYV+LR
Sbjct: 583 ANYEKDEALARHVTYVHRFCKNPEIGFEPVRPEVLRYFIAIAKQYQPSIPEHLCSYIVEAYVSLR 647 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147201.3200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147201.3200.1 >prot_H-elongata_contig147201.3200.1 ID=prot_H-elongata_contig147201.3200.1|Name=mRNA_H-elongata_contig147201.3200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp GRHGKRYRACKTRDIRAPVQEEPRARLRAFRPEVPQAIYLSGAHARTVRPback to top mRNA from alignment at H-elongata_contig147201:123..686+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147201.3200.1 ID=mRNA_H-elongata_contig147201.3200.1|Name=mRNA_H-elongata_contig147201.3200.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=564bp|location=Sequence derived from alignment at H-elongata_contig147201:123..686+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147201:123..686+ >mRNA_H-elongata_contig147201.3200.1 ID=mRNA_H-elongata_contig147201.3200.1|Name=mRNA_H-elongata_contig147201.3200.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at H-elongata_contig147201:123..686+ (Himanthalia elongata Himel1 dioecious)back to top |