mRNA_H-elongata_contig146745.3174.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0K072_9PHAE (Acetohydroxy-acid synthase small subunit n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K072_9PHAE) HSP 1 Score: 351 bits (900), Expect = 1.260e-121 Identity = 185/194 (95.36%), Postives = 192/194 (98.97%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGY+RITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEIT+DPGKI+ALQKVLEKYKILELIRTGEIGLLRESN+ST+SLREYPH EDN SQFNQ+NIK+LFPQEY
Sbjct: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYNRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITADPGKIIALQKVLEKYKILELIRTGEIGLLRESNVSTSSLREYPHAEDNFSQFNQDNIKDLFPQEY 194
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0F6Q2_AKKLU (Acetolactate synthase small subunit n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6Q2_AKKLU) HSP 1 Score: 258 bits (660), Expect = 3.410e-85 Identity = 135/192 (70.31%), Postives = 165/192 (85.94%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDN--LSQFNQENIKNLF 570
MKRT+SV+ EKDAGGLVRI+SL+TRRRFQIESIT+ ACER Y+RITI+VINQ DG D+A QLT+Q+RKL+NVVNVKDITYLP VQREL+LIKL+V+ ER EILNL Q+FRFKI+D+TD TLI+EIT+DPGKI+AL KVLEKY IL+L RTGEI L RES+++T+SLREYP E N + + +NI++LF
Sbjct: 1 MKRTISVLVEKDAGGLVRIVSLLTRRRFQIESITMAACERKCYERITIIVINQSDGSDAASQLTKQIRKLVNVVNVKDITYLPLVQRELLLIKLQVDLMERTEILNLAQVFRFKIIDMTDSTLIIEITADPGKIVALHKVLEKYTILQLSRTGEIALTRESSVNTSSLREYPEFEVNTVIGKNYNKNIEDLF 192
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A0S0G9Z6_COSCS (Acetolactate synthase small subunit n=19 Tax=Laminariales TaxID=2886 RepID=A0A0S0G9Z6_COSCS) HSP 1 Score: 258 bits (659), Expect = 5.550e-85 Identity = 134/194 (69.07%), Postives = 168/194 (86.60%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
MKRT+SV+ EKDAGGLVRI+SL+TRRRFQIESIT+ ACER Y+RITIVVINQ DG D+A QLT+QL+KLINVVNV+DITYLP VQRELILIKL+V+ ER EI+NL ++FRFKI D+T+ TLILEIT+DPGKI+ALQK+L+KY IL+L RTGEI L RES+++T+SL+EYP E + S+ + +NI+ LF ++Y
Sbjct: 1 MKRTISVLVEKDAGGLVRIVSLLTRRRFQIESITMAACERKCYERITIVVINQSDGSDAASQLTKQLKKLINVVNVQDITYLPLVQRELILIKLQVSVIEREEIINLAEVFRFKITDITESTLILEITADPGKIVALQKILKKYNILQLSRTGEIALTRESSVNTSSLKEYPEFETDTSRNSFKNIEELFYKDY 194
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0F7F2_9PHAE (Acetolactate synthase small subunit n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7F2_9PHAE) HSP 1 Score: 256 bits (655), Expect = 2.250e-84 Identity = 134/194 (69.07%), Postives = 165/194 (85.05%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
MKRT+SV+ EKDAGGL RIISL+TRRRFQIESIT+ ACER Y+RITIVVINQ DG D+A QLT+Q++KL+NVVNV+DITYLP VQRELILIKL+V+ ER EILNL Q+FRFKI D+T+ TLILE+T+DPGKI+ALQK+LEKY IL+L RTGEI L RES++ST+SL+EYP E + + +NI+ LF ++Y
Sbjct: 1 MKRTISVLVEKDAGGLARIISLLTRRRFQIESITMAACERKCYERITIVVINQSDGSDAASQLTKQVKKLLNVVNVQDITYLPLVQRELILIKLQVSVTEREEILNLAQVFRFKITDITESTLILELTADPGKIVALQKILEKYNILQLSRTGEIALTRESSVSTSSLKEYPEFEADTGRNYFKNIEELFYKDY 194
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: D1J7C0_ECTSI (Acetolactate synthase small subunit n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7C0_ECTSI) HSP 1 Score: 254 bits (649), Expect = 1.510e-83 Identity = 133/194 (68.56%), Postives = 161/194 (82.99%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
M+RT+SV+ EKD GGLVRIISL+TRRRF I+SIT+ CER GY+RI IVVINQ DG D+ KQLT+Q+RKLINVVNV+DITYLP ++REL+LIKL+VN ER EILNL QIFRFKI DVTD TLILE+T+DPGKI AL+KVLEKY IL+L+RTG I L+RES +ST+SL+EYP E Q NI++LF ++Y
Sbjct: 1 MERTISVLVEKDPGGLVRIISLLTRRRFHIKSITLSPCERKGYERIIIVVINQSDGVDAGKQLTKQIRKLINVVNVQDITYLPLIERELVLIKLKVNLIERTEILNLAQIFRFKITDVTDSTLILEVTADPGKIAALEKVLEKYNILQLVRTGRIALIRESRVSTSSLKEYPEFEVLTGQNYLNNIEDLFKKDY 194
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A0R6LUP2_UNDPI (Acetolactate synthase small subunit n=5 Tax=Alariaceae TaxID=2887 RepID=A0A0R6LUP2_UNDPI) HSP 1 Score: 253 bits (645), Expect = 7.480e-83 Identity = 129/194 (66.49%), Postives = 166/194 (85.57%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
MKRT+SV+ EKDAGGLVRIISL+TRRRFQIESIT+ +CER Y+RITIVVINQ DG D+A QLT+Q++KL+NVVNV+DITYLP VQREL+LIKL+++ ER EILNL ++FRFKI D+T+ TLILE+T+DPGKI+ALQK+LEKY IL+L RTGEI + RES++ST+SL+EYP + + + +NI+ LF ++Y
Sbjct: 1 MKRTISVLVEKDAGGLVRIISLLTRRRFQIESITMASCERKCYERITIVVINQSDGSDAASQLTKQIKKLLNVVNVQDITYLPLVQRELVLIKLQISVTEREEILNLAKVFRFKITDITESTLILELTADPGKIVALQKILEKYNILQLSRTGEIAVTRESSVSTSSLKEYPEFDADTGRNYFKNIEELFYKDY 194
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0JXD3_9PHAE (Acetolactate synthase small subunit n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JXD3_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.320e-82 Identity = 132/193 (68.39%), Postives = 166/193 (86.01%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLS---QFNQENIKNLF 570
MKRT+SV+ EKDAGGLVRIISL+TRRRFQIESIT+ ACER Y+RITI++INQ DG D+A QLT+Q+RKL+NVVNVKDIT LP VQREL+LIKL+VN ER EILNL Q+FRFK++D+TD TLILEIT+DPGKI+AL +VL+KY IL+L RTGEI L RES+++T+SL+EYP ++N+ +N+ NI++LF
Sbjct: 1 MKRTISVLVEKDAGGLVRIISLLTRRRFQIESITMAACERKCYERITIIIINQSDGSDAASQLTKQMRKLVNVVNVKDITCLPLVQRELLLIKLQVNLIERTEILNLAQVFRFKVIDMTDSTLILEITADPGKIVALYQVLDKYNILQLSRTGEIALTRESSVNTSSLKEYPGFDNNVGVGKNYNK-NIEDLF 192
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A516IDP2_9PHAE (Acetolactate synthase small subunit n=2 Tax=Lessonia TaxID=105411 RepID=A0A516IDP2_9PHAE) HSP 1 Score: 250 bits (639), Expect = 5.720e-82 Identity = 131/190 (68.95%), Postives = 159/190 (83.68%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLF 570
MKRT+SV+ EKDAGGLVRI+SL+TRRRFQIESIT+ ACER Y+RITIVVINQ DG D+A QLT+Q++KLINVVNV+DITYLP VQREL+LIKL+VN ER EIL L IFRFKI D+T+ TLI+E+T+DPGKI+ALQK+LEKY IL+L RTGEI L RES++ST+SL+EYP E + N++ LF
Sbjct: 1 MKRTISVLVEKDAGGLVRIVSLLTRRRFQIESITMAACERKCYERITIVVINQSDGSDAASQLTKQIKKLINVVNVQDITYLPLVQRELVLIKLQVNIIEREEILRLADIFRFKINDITESTLIIEVTADPGKIVALQKILEKYNILQLSRTGEIALTRESSVSTSSLKEYPEFEAGTGRNYFINVEELF 190
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A344PFD2_9PHAE (Acetolactate synthase small subunit n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFD2_9PHAE) HSP 1 Score: 246 bits (627), Expect = 3.340e-80 Identity = 127/194 (65.46%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
M+RT+SV+ EKD GGLVRIISL+TRRRF ++SIT+ CER Y+RITIV+INQ DG D+ KQLT+Q+RKLINVVNVKDITYLP VQREL+L+KL+VN +ERAEI L QIFRFKI D+TD T+ILE+T+D GKI AL+K+LEKY IL+L RTG I L+RES +ST SL+EYP + Q +NI++LF ++Y
Sbjct: 1 MERTISVLVEKDTGGLVRIISLLTRRRFHLKSITMSTCERKCYERITIVLINQSDGVDAGKQLTKQIRKLINVVNVKDITYLPLVQRELVLVKLQVNLKERAEISTLAQIFRFKITDMTDSTIILEVTADQGKIAALEKILEKYNILQLSRTGGIALIRESGVSTLSLKEYPEFDPRTGQNYLKNIEDLFQKDY 194
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A1I9LVF0_9PHAE (Acetolactate synthase small subunit n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVF0_9PHAE) HSP 1 Score: 244 bits (622), Expect = 1.930e-79 Identity = 127/194 (65.46%), Postives = 158/194 (81.44%), Query Frame = 1
Query: 1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 582
M+RT+SV+ EKD GGL RIIS++TRRRF ++SIT+ +CER GY+R+TIV+INQ DG DS QLT+Q+RKLINVVNVKDITYLP V+REL+LIKL+V+ ERAEI NL QIFRFKI D+TD T+ILE+T+D GKI ALQK+LEKY ILEL R+G I L+RES +ST+SL+EYP E Q NI++LF + Y
Sbjct: 1 MERTISVLIEKDTGGLARIISILTRRRFHLKSITMSSCERKGYERLTIVLINQSDGVDSGMQLTKQIRKLINVVNVKDITYLPLVERELVLIKLQVSLIERAEISNLAQIFRFKITDITDSTIILEVTADQGKIAALQKILEKYNILELSRSGRIALIRESGVSTSSLKEYPEFELLTGQNYLNNIEDLFKKNY 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig146745.3174.1 >prot_H-elongata_contig146745.3174.1 ID=prot_H-elongata_contig146745.3174.1|Name=mRNA_H-elongata_contig146745.3174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVback to top mRNA from alignment at H-elongata_contig146745:1005..1586- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig146745.3174.1 ID=mRNA_H-elongata_contig146745.3174.1|Name=mRNA_H-elongata_contig146745.3174.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=582bp|location=Sequence derived from alignment at H-elongata_contig146745:1005..1586- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig146745:1005..1586- >mRNA_H-elongata_contig146745.3174.1 ID=mRNA_H-elongata_contig146745.3174.1|Name=mRNA_H-elongata_contig146745.3174.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig146745:1005..1586- (Himanthalia elongata Himel1 dioecious)back to top |