mRNA_H-elongata_contig14601.3142.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: D7FTB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB6_ECTSI) HSP 1 Score: 276 bits (706), Expect = 6.730e-88 Identity = 144/235 (61.28%), Postives = 171/235 (72.77%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEIIDSAGNVTAI---ACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTY 696
+APN V+ ELCP N+ANR Y VP QLT NGM QA LG+F+R+ Y+ESMDFLPPTLGS T FSS+ SD A RCLQTAQAMA GLFP GTGPPGFPNQP+AV TE FA+LLAAP G C ++ +AD+ +D +RG+E+I + N+T + ACG E Y D GKEG+VLGVKDV DMLDFDEQQGLPRL S+S++ H T LAFTLLQERYYS+R Q+ Y
Sbjct: 28 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIESMDFLPPTLGSG----CTPTFSSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMAVLTEPNR--FASLLAAPHGPCLAQQKADNAAYDSTRGEELIQQSRNITDVVSQACGVPTEAYTNVDNGKEGLVLGVKDVSDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQLLY 256
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: A0A6H5L0W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W9_9PHAE) HSP 1 Score: 270 bits (691), Expect = 7.210e-88 Identity = 142/238 (59.66%), Postives = 168/238 (70.59%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEIIDSAGNVTAI---ACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAG 705
+APN V+ ELCP N+ANR Y VP QLT NGM QA LG+F+R+ Y+ SMDFLPPTLGS F SS+ SD A RCLQTAQAMA GLFP GTGPPGFPNQP+ V TE FA+LLAAP G C ++ +AD+ +D +RG E+I + N+T + ACG E Y D GKEG+VLGVKDVGDMLDFDEQQGLPRL S+S++ H T LAFTLLQERYYS+R Q + G
Sbjct: 28 QAPNTVVDELCPANKANRAKYNVPPGQLTENGMNQALKLGNFLRETYIGSMDFLPPTLGSGSMPTF----SSWLKSDSAARCLQTAQAMAMGLFPYGTGPPGFPNQPMPVLTEPDR--FASLLAAPHGPCLAQQKADNAAYDSTRGVELIQQSRNITDVVSKACGVPTEAYTNVDNGKEGLVLGVKDVGDMLDFDEQQGLPRLASVSKQAHEDMTQLAFTLLQERYYSNRRQANHLLG 259
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: K3WPM1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPM1_GLOUD) HSP 1 Score: 181 bits (459), Expect = 1.280e-50 Identity = 105/256 (41.02%), Postives = 143/256 (55.86%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEIIDSAGNV---TAIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAGDLPFQLLDDFDAAVERHS 759
+APN V+ +CP N N AYKVP EQLT GMRQ G ++RK YVE FL P+L + F +YF +D A RC Q+A A+ GL+P+GTGP GFP++PV V + + + AAPKG C + AD V+ E+R E++D + CG VE G E +VLGVKD+ DM FD + LP ++ E A+ LAFT L ERYYS+ ++TYW G LL++ ++A + S
Sbjct: 38 RAPNGVVAHICPTNSGNLNAYKVPLEQLTEIGMRQMLAAGEYVRKVYVEEKGFLSPSLNGVNH----THFEAYFRADAATRCHQSATALGYGLYPDGTGPKGFPHEPVPVTMQL--LKNEHEFAAPKGPCAATLHADLGVYAETRALELLDENQKMLEKVGEICGVSVEQIPTTPGG-EDLVLGVKDIADMFIFDRDEELPPTKGLTTEISAQIEQLAFTNLMERYYSTDREITYWVGGFADLLLNNLNSAAKPTS 286
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: F0WMG0_9STRA (Uncharacterized protein AlNc14C156G7650 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMG0_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.370e-49 Identity = 104/261 (39.85%), Postives = 144/261 (55.17%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRG--------KEIIDSAGNVTAIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAGDLPFQLLDDFDAAVERHS 759
+APN V +CPNN AN AYKVP QLT NGM Q +G IR+ YVE+ +FL + +R +F +YF +D A RC +A+A+A GL+P G+GP GFP Q V V E + ++ AAPKG CK+ D + + + K+++D G ACG + D +G E ++L VKD+ DML FD+Q+GL LP + +T + L F L ERYYSS +TYW G P LL + + A +S
Sbjct: 38 RAPNYVTHTICPNNHANLQAYKVPPAQLTVNGMNQLVQVGKHIREIYVETQNFLSESFSGEKRLHF----EAYFRADAATRCAHSAEALALGLYPFGSGPEGFPLQLVPVTMEL--LQHEHVFAAPKGPCKATLARDLAQYAQQKAPELFQGEDKDVLDRLG----AACGINMTDVPHL-KGGEDLILAVKDIADMLTFDQQEGLSPLPGLDTDTMKKVEQLGFRNLMERYYSSDRMITYWNGAFPDLLLKNLNDAARPNS 287
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: A0A0P1A552_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A552_PLAHL) HSP 1 Score: 173 bits (439), Expect = 1.020e-47 Identity = 106/254 (41.73%), Postives = 142/254 (55.91%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRY-VESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEIIDSAGNV---TAIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAGDLPFQLLDDF-DAAV 747
+APN +++ +CP N+ N AY+VP QLT GM Q +G IR+ Y V+ ++ L S G S F +YF +D A RC Q+A A+ GL+P+GTGP GFP+QPV + + A AAPKG C S EAD V+ + R E+ D +V ACG +ED G++ VLGVKD+ DM FD +GLP L ++ E + LAFT L ERY+SS +VTYW G LL+ D AV
Sbjct: 42 RAPNNIVRFICPRNKRNLDAYEVPLTQLTEIGMNQLLAVGEHIRRTYMVDELEHEEAFLSRSLNGVNHSHFETYFRADAATRCAQSATALGYGLYPDGTGPHGFPHQPVPITMQLVENEHA--FAAPKGPCLSTLEADLAVYAQHRAPELFDHYRDVLEQVGKACGVFIEDIPYIPGGEDA-VLGVKDLADMFVFDRDEGLPLLEGVTVEAREKLNQLAFTNLMERYFSSDRKVTYWVGGFSDLLLNTLHDGAV 292
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: A0A8K1CT79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT79_PYTOL) HSP 1 Score: 172 bits (437), Expect = 1.960e-47 Identity = 105/252 (41.67%), Postives = 140/252 (55.56%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEII----DSAGNVTAIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAGDLPFQLLDDFDAA 744
+APN +++ +CPNN N AY VP EQLT GM+Q +G IRK YVE FL T + +F +YF SD A RC Q+A A+ GL+P+GTGP GFP QPV V + + + AAPKG CK AD + ++R KE++ DS ++ I CG V D K +G E +VL VKD+ DM FD + LP L ++ E + LAFT L ERYY++ +TYW G LL + A
Sbjct: 39 RAPNDIVERICPNNLKNLEAYNVPLEQLTEFGMQQLVAVGEHIRKVYVEEKKFLSSTFNGVKHAHF----ETYFRSDAATRCSQSATAVGYGLYPDGTGPKGFPRQPVPVTMQL--LQNEHDFAAPKGPCKKTFVADMVKYADTRAKELMTQYNDSLVKMSEI-CGVNVFDVPKM-QGGEDLVLAVKDIADMFIFDRDEQLPPLDGLTPELSEQLEQLAFTNLMERYYTTDRMITYWNGGFSDLLLGKLNEA 282
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: H3GVL5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVL5_PHYRM) HSP 1 Score: 172 bits (436), Expect = 2.960e-47 Identity = 103/243 (42.39%), Postives = 136/243 (55.97%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRY-VESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKE-------IIDSAGNVTAIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAG 705
+APN ++++ CP N+AN AYKVP QLT GM+Q +G +R Y V+ L S G S F +YF +D A RC Q+A A+ GL+P+GTGP GFP+QPV + + A AAPKG CKS +AD V+ E+R E I+D G V CG V+D G E +VLGVKD+ DM FD +GLP ++ E + LAFT L ERYYS+ ++TYW G
Sbjct: 41 RAPNDIVKDACPRNKANLDAYKVPLTQLTEVGMKQLQAVGEHVRHTYMVDESQHEEAFLSRSLNGINHSHFETYFRADAATRCSQSATAVGYGLYPDGTGPRGFPHQPVPITMQLVENEHA--FAAPKGPCKSTMDADLAVYAETRAPELFEQYRDILDQLGEV----CGVAVKDIPNVPGG-EDVVLGVKDLADMFIFDHDEGLPLPEGMTVEARQKLEQLAFTNLMERYYSTDREITYWVG 276
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: A0A3M6VR71_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR71_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.290e-47 Identity = 102/239 (42.68%), Postives = 136/239 (56.90%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRY-VESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEIIDSAGNVT---AIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAG 705
+APN V++ +CP+N+AN AYKVP +QLT NGM+Q +G IR Y V+ L S G S F +YF SD A RC Q+A A+A GL+P+GTGP G+P+QPV + + A AA KG CK+ +AD V+ +R E+ D +V CG VED G E +VLGVKD+ DM FD +GLP ++ + LAFT L ERYYS+ ++TYW G
Sbjct: 28 RAPNDVVKIMCPHNKANLDAYKVPLKQLTENGMKQMQAVGEHIRLTYMVDEPLHEDAFLSRSFNGVNHSHFETYFRSDAATRCSQSAAAVAYGLYPDGTGPQGYPHQPVPITMQLVENEHA--FAATKGPCKNTLDADLAVYANTRAPELFDQYRDVLDQLGAVCGVAVEDIPNLPGG-EDIVLGVKDLADMFGFDRDEGLPLTEGMTVVAREKLEQLAFTNLMERYYSTDREITYWVG 263
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: A0A6G0X1Y2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1Y2_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.230e-47 Identity = 98/245 (40.00%), Postives = 138/245 (56.33%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEIIDSAGNV---TAIACGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAGDLPFQLL 726
+ PN + LCPNN+ N LAY+VP E+LT GM Q G +R Y+++ FL ++ R +F +YF SD A RC Q+A +M GL+P GTGP GF +QP+AV E + + AAPKG CK+ +AD K + ++R +E+I+ + CG V D G E +V+G+KD+ D FD QQGL R+ ++ E + LAF L ERYYS+ ++TYW G P LL
Sbjct: 50 RRPNGITSVLCPNNKENALAYEVPPEELTEIGMEQMRLAGREVRHEYIDNQGFLSNSISGPERKHF----ETYFRSDAANRCAQSAISMGYGLYPEGTGPRGFYHQPIAVYMEL--LKDEHEFAAPKGPCKAVLKADIKTYLDTRAQELIEEHRPMLEKVGELCGVSVWDIPNLPDG-EDIVMGIKDIADTFTFDTQQGLHRMKGLTPELQSEIEGLAFQNLMERYYSTNREITYWVGGFPTLLL 287
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Match: A0A485LMH3_9STRA (Aste57867_23181 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMH3_9STRA) HSP 1 Score: 171 bits (433), Expect = 6.460e-47 Identity = 98/247 (39.68%), Postives = 139/247 (56.28%), Query Frame = 1
Query: 1 KAPNPVMQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPTLGSSRRGNFTSEFSSYFMSDPAERCLQTAQAMAQGLFPNGTGPPGFPNQPVAVQTEQASMPFANLLAAPKGACKSKAEADDKVFDESRGKEII-DSAGNVTAIA--CGTKVEDYAKADRGKEGMVLGVKDVGDMLDFDEQQGLPRLPSISEETHARYTALAFTLLQERYYSSREQVTYWAGDLPFQLLDD 732
+ PNP+ + LCPNN N Y VP QLT GM+Q +G +R+ YV +L SS G F +YF SD A+RC Q+A +M GL+P+GTGP GFP+QP+AV + + AA +G C++ +E+D + E+R +E+I + A + + CG + D G E +V G+KD+ D FD Q GLPR+ ++ A LAF L ERYYS+ E++TYW PF LLD+
Sbjct: 32 RRPNPIAKYLCPNNHNNSETYLVPPAQLTQLGMQQMRAVGEEVRREYVTKQGYL----SSSISGPTREHFETYFRSDSADRCAQSAISMGYGLYPDGTGPEGFPHQPIAVYMQLIRNE--HDFAATEGPCQAISESDVDKYFETRAQELIKEHAPMLETVGQLCGINIWDIPTMTHG-EDIVTGIKDIADAFTFDTQHGLPRMAGLTPALQAEIEGLAFQNLMERYYSTPEEITYWVAGFPFLLLDN 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14601.3142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14601.3142.1 >prot_H-elongata_contig14601.3142.1 ID=prot_H-elongata_contig14601.3142.1|Name=mRNA_H-elongata_contig14601.3142.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp MQELCPNNEANRLAYKVPQEQLTANGMRQAYHLGSFIRKRYVESMDFLPPback to top mRNA from alignment at H-elongata_contig14601:4260..7066- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14601.3142.1 ID=mRNA_H-elongata_contig14601.3142.1|Name=mRNA_H-elongata_contig14601.3142.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2807bp|location=Sequence derived from alignment at H-elongata_contig14601:4260..7066- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14601:4260..7066- >mRNA_H-elongata_contig14601.3142.1 ID=mRNA_H-elongata_contig14601.3142.1|Name=mRNA_H-elongata_contig14601.3142.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at H-elongata_contig14601:4260..7066- (Himanthalia elongata Himel1 dioecious)back to top |