mRNA_H-elongata_contig14582.3133.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: D7G2N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2N4_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.720e-73 Identity = 122/188 (64.89%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 1 MSNTKSNQRPGRREDELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTG------ALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
MS + SN + RR+DELTALKV KL QQ+EL EFN ILTR+GGLN+ AR+TCKNLE AI IATRPG IEYYRP EE RIV NG L L +IA LQRDIDQV E+DI Q A + +A + P CSSLAEWFA YG+P P A+SG+ T+FEE KIYGGT+HHRAFKTQAT MKKGR+TR
Sbjct: 1 MSGSTSNHQGSRRQDELTALKVRKLGQQEELAKEFNFILTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELTVLTNKIARLQRDIDQV-EQDIQQADVVASSTAAAAQAQPSARPPCSSLAEWFAAYGEPAPSASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 187
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A7S2UW48_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW48_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.870e-43 Identity = 80/164 (48.78%), Postives = 109/164 (66.46%), Query Frame = 1
Query: 43 DELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKG 534
++L K KL+QQK L +EFN ILTREGGLNE +R+ CKNLE A+ +A RPG EYY+ P EV+RI+ L L +I +QR++DQ+ + +I Q + RN P ++L +WFA+YG P PP +G + FE K+YGGT HHRAFK+Q+ S+KKG
Sbjct: 24 EQLYEQKASKLAQQKNLSDEFNEILTREGGLNEVSRQACKNLEAAVAVAQRPGYFEYYQAPAEVQRIIAADDLKLLTNKINQIQRELDQI-DSEIEQLSK-QHYSQRN-PPQVNNLGQWFAVYGTPKPPP-NGTLSVFEPSDKVYGGTQHHRAFKSQSRSLKKG 183
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A7S2SKE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKE1_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.310e-42 Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 43 DELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
D L A KV KL QQK + +E N ILTRE GLN+ + KT +NLE A+V++ +PG EY++ P EV+ V N L +L ++ +Q +IDQ+ + H + AP E SL +W A +G P P SG F++F++ KIYGGT+HHRAFKTQ+ +MK+GRLTR
Sbjct: 26 DGLLAAKVAKLDQQKRVTDEMNAILTRENGLNDTSHKTMRNLEVAVVVSKQPGFFEYFQAPSEVQAAVRNNDLVQLTKKVKRIQSEIDQIDAEIEHLRSKQTPAAPALGE--MRSLKQWLAHHGAPKQPP-SGYFSTFQDAPKIYGGTNHHRAFKTQSMTMKRGRLTR 190
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A7S2FSZ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSZ0_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.020e-39 Identity = 74/164 (45.12%), Postives = 103/164 (62.80%), Query Frame = 1
Query: 61 KVCKLSQQKELVNEFNHILTREG--GLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
K+ KL +QK + +E N +LTR G GLNE +RKT KNLE A+V++ RPG EYY+P EVE I +NG + L+ ++ L +I Q+ + + A+ + P +SLA+W A YG P SG ++ F + KIYGGT HHRAFKTQ+ +MK+GRL R
Sbjct: 10 KMAKLKEQKRVADEINELLTRPGEDGLNESSRKTMKNLEVAVVVSKRPGFFEYYKPAPEVEAIQKNGEIQHLVKKLNRLGGEIAQL-DAESQNIEAMRKPLKMSSGPELTSLAQWNARYGTVEKPVPSGFYSGFNDAPKIYGGTEHHRAFKTQSRTMKRGRLIR 172
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: G4YKG6_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YKG6_PHYSP) HSP 1 Score: 140 bits (353), Expect = 3.750e-39 Identity = 77/175 (44.00%), Postives = 99/175 (56.57%), Query Frame = 1
Query: 46 ELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEK--------DIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
EL KV L QQK + N +L GG NE +RKTCKNLE AI + RPG YY PE V+ ++ G + L +I HLQ+ IDQ+ EK ++ TG T SL W A YG P P +TS +FT F K+YGGT+H+ AF+TQA++MKKGRLT+
Sbjct: 6 ELVKKKVELLEQQKAKAAKLNELLDAPGGFNEVSRKTCKNLEAAITASKRPGYFAYYEQPENVKNVLRTGGMQRLQEQIVHLQKQIDQLTEKIEKSAEGHEVGHTGITIT-----------SLKHWLATYGTPKPQSTSDLFTVFTPDKKVYGGTAHYSAFRTQASTMKKGRLTK 169
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A1V9ZCG4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCG4_9STRA) HSP 1 Score: 139 bits (351), Expect = 6.670e-39 Identity = 77/168 (45.83%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 43 DELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
+EL A K L QKE ++FN IL LNE +RKTCKNLE AI + +PG YY P+ V+ +V+NG L +L I LQ+ IDQ+ + ++Q G S + + SL +WFA YG P P TSG+ TSF K+YGGT H+ AFK+Q+ +MKKGRLT+
Sbjct: 2 EELRAKKTELLHAQKEKADKFNEILE---SLNEASRKTCKNLEAAITASKKPGYFSYYEQPDVVKAVVKNGELRKLQNAIVQLQQKIDQIDGELMNQQGTNSIENGGQSDSNVQSLKQWFATYGTPKP-VTSGMLTSFVNDPKVYGGTEHYAAFKSQSLTMKKGRLTK 165
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A1V9ZEM2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEM2_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.680e-38 Identity = 77/168 (45.83%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 43 DELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
DEL A K L Q+E + F+ +L GGLNE +RKTCKNLE AI + +PG YY P+ V+ +V+NG L +L I LQ+ IDQ+ + ++ A + AP E SL +WF+ YG P P TSG+ TSF K+YGGT H+ AFK+Q+ +MKKGRLT+
Sbjct: 2 DELRAKKAELLLAQQEKADRFHELLVGPGGLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVVKAVVKNGELRKLQGVIVQLQQKIDQI-DAELANHAAKAAAAPVTNE--VQSLKQWFSTYGTPKP-VTSGMLTSFATDPKVYGGTEHYSAFKSQSLTMKKGRLTK 165
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A6G0X4V5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4V5_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.360e-37 Identity = 73/168 (43.45%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 43 DELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
+EL K L Q++ ++F+ IL+ GGLNE +RKTCKNLE AI + +PG Y+ PE V+ I++NG L +L T I L + I+QV + + T A + + +WF YG P P TSG+ TSF K+YGGT H+ AFKTQ+T+MKKGRLT+
Sbjct: 2 EELQKKKEELLHAQRDKADKFHAILSGPGGLNETSRKTCKNLEAAISASKKPGYFSYFDQPEVVKAIIKNGELRKLQTAILQLHQKIEQVDVEIANHTKAGNVPGAAGTASDIQTFKQWFTTYGTPKP-VTSGVLTSFSANPKVYGGTEHYSAFKTQSTTMKKGRLTK 168
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A812TWU8_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TWU8_SYMMI) HSP 1 Score: 134 bits (337), Expect = 1.200e-36 Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = 1
Query: 49 LTAL---KVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEKDIH--QTGALSTKAPRNLEPGCSSLAEWFAIYGKP-HPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
LTAL KV KL++QK L + N +LT++GGLN++++ KNL AI +A +PG EYY P EV I ++ L+ L+ + + R+IDQ+ + H Q G KA +L +S+++WF YG+P + T+F+ KIYGGT+HHRAFKTQA++MKKGR+T+
Sbjct: 9 LTALYERKVQKLNEQKALSDRMNELLTKKGGLNDNSKNVRKNLSAAIAVAKQPGYFEYYETPSEVREIEDSKILSSLVKSLGKVHREIDQINSEIAHHHQKGPEPPKAESSL----TSMSQWFETYGRPENTHCLEERMTTFQPSPKIYGGTNHHRAFKTQASNMKKGRVTK 176
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Match: A0A662X6A5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6A5_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.340e-36 Identity = 70/169 (41.42%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 43 DELTALKVCKLSQQKELVNEFNHILTREGGLNEHARKTCKNLECAIVIATRPGAIEYYRPPEEVERIVENGYLAELLTRIAHLQRDIDQVVEK-DIHQTGALSTKAPRNLEPGCSSLAEWFAIYGKPHPPATSGIFTSFEEIVKIYGGTSHHRAFKTQATSMKKGRLTR 546
+EL KV L QQK V+ N +L GG NE +RK CKNLE AI + RPG YY P+ ++ +V +G + L ++ HLQ+ ID + EK + G T++ N+ ++L +W AIYG P +S ++T+F K+YGGT+H+ AFK+Q+++MKKGRLT+
Sbjct: 5 EELVKKKVELLGQQKAKVDRINELLNAPGGFNETSRKACKNLEAAITASKRPGYFAYYEQPDNLKAVVRSGEVQRLQDQVLHLQKQIDLLTEKIEKSDEGHAPTQSASNI----NNLKQWMAIYGTPKQ-TSSDLYTTFSPDKKVYGGTAHYSAFKSQSSTMKKGRLTK 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14582.3133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14582.3133.1 >prot_H-elongata_contig14582.3133.1 ID=prot_H-elongata_contig14582.3133.1|Name=mRNA_H-elongata_contig14582.3133.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp MSNTKSNQRPGRREDELTALKVCKLSQQKELVNEFNHILTREGGLNEHARback to top mRNA from alignment at H-elongata_contig14582:1854..3740+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14582.3133.1 ID=mRNA_H-elongata_contig14582.3133.1|Name=mRNA_H-elongata_contig14582.3133.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1887bp|location=Sequence derived from alignment at H-elongata_contig14582:1854..3740+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14582:1854..3740+ >mRNA_H-elongata_contig14582.3133.1 ID=mRNA_H-elongata_contig14582.3133.1|Name=mRNA_H-elongata_contig14582.3133.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig14582:1854..3740+ (Himanthalia elongata Himel1 dioecious)back to top |