mRNA_H-elongata_contig145765.3128.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig145765.3128.1
Unique NamemRNA_H-elongata_contig145765.3128.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A8F0FAK8_9PHAE (AAA domain-containing protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAK8_9PHAE)

HSP 1 Score: 481 bits (1237), Expect = 1.310e-167
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 1
Query:    1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKT+PVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDI PQRTRLIQNWATSGRIRLA
Sbjct:  248 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTVPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIDPQRTRLIQNWATSGRIRLA 493          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A0S0GAM3_COSCS (Ycf46 n=28 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAM3_COSCS)

HSP 1 Score: 444 bits (1141), Expect = 4.600e-153
Identity = 220/246 (89.43%), Postives = 238/246 (96.75%), Query Frame = 1
Query:    1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            TEIF+E+A+NYGLVTPKGVLIIGMQGSGKSLIAK+VA+EW+LPLLRLDVGRLFAGVVGESESRVREMI IAESLAPCVLWVDEIDKAF+DSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDI+SLPVEILRKGRFDEIFFLGIPT  ER+LIYEVHL+RFRP+TW+TYDSK+LS+RARKFSGAEIEQTIIDAMYVAFSE REFTTND+LIAIKET+PILDI P RT LIQNWA SG+IR+A
Sbjct:  246 TEIFSEQALNYGLVTPKGVLIIGMQGSGKSLIAKSVAYEWKLPLLRLDVGRLFAGVVGESESRVREMIAIAESLAPCVLWVDEIDKAFSDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIYSLPVEILRKGRFDEIFFLGIPTVDERKLIYEVHLRRFRPETWQTYDSKKLSKRARKFSGAEIEQTIIDAMYVAFSEQREFTTNDILIAIKETIPILDIDPLRTELIQNWAASGKIRVA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A2R4QPR8_9PHAE (AAA domain-containing protein n=15 Tax=Fucales TaxID=3009 RepID=A0A2R4QPR8_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 6.710e-143
Identity = 201/246 (81.71%), Postives = 232/246 (94.31%), Query Frame = 1
Query:    1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            T+IF+E+A+NYGLVTPKG+L+IGMQGSGKSLI+KA+A+EW+LPLLRLDVGRLF G+VGESESRVREMI I ESLAPCVLWVDEIDKAF+DSEQN D+GTT RVLATF+TWLGEKTL VFVIATANDI+SLP+EILRKGRFDEIFFLGIPT  ER++IYE+HLKRFRPDTW  YD K LS++ARKFSGAEIEQTIIDAMYVAFSE+REFTTND+L+AIKET+PIL++ P RT++IQNWA+SGRIR+A
Sbjct:  246 TDIFSEEAINYGLVTPKGLLLIGMQGSGKSLISKAIAYEWKLPLLRLDVGRLFGGIVGESESRVREMISITESLAPCVLWVDEIDKAFSDSEQNSDNGTTNRVLATFLTWLGEKTLSVFVIATANDIYSLPLEILRKGRFDEIFFLGIPTIDERKMIYEIHLKRFRPDTWHKYDIKTLSKKARKFSGAEIEQTIIDAMYVAFSEHREFTTNDILVAIKETIPILEMDPLRTQMIQNWASSGRIRVA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: UPI001FA7AF61 (hypothetical protein Ycf46 n=1 Tax=Silvetia siliquosa TaxID=93837 RepID=UPI001FA7AF61)

HSP 1 Score: 415 bits (1067), Expect = 7.730e-142
Identity = 200/246 (81.30%), Postives = 230/246 (93.50%), Query Frame = 1
Query:    1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            T IF+E+A+NYGLVTPKG+L+IGMQGSGKSLI+KA+A+EW+LPLLRLDVGRLF G+VGESE RVREMI I ESLAPCVLWVDEIDKAF+DSEQN D+GTT RVLATF+TWLGEKTL VFVIATANDI+SLP+EILRKGRFDEIFFLGIPT  ER++IYE+HLKRFRPDTW  YD K LS++ARKFSGAEIEQTIIDAMYVAFSE+REFTTND+L+AIKET+PIL++ P RT++IQNWA+SGRIR+A
Sbjct:  246 TNIFSEEAINYGLVTPKGLLLIGMQGSGKSLISKAIAYEWKLPLLRLDVGRLFGGIVGESECRVREMISITESLAPCVLWVDEIDKAFSDSEQNSDNGTTNRVLATFLTWLGEKTLSVFVIATANDIYSLPLEILRKGRFDEIFFLGIPTIDERKMIYEIHLKRFRPDTWHKYDIKTLSKKARKFSGAEIEQTIIDAMYVAFSEHREFTTNDILVAIKETIPILEMDPLRTQMIQNWASSGRIRVA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A8E6D2J5_9PHAE (AAA domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2J5_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 3.360e-133
Identity = 187/246 (76.02%), Postives = 222/246 (90.24%), Query Frame = 1
Query:    1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            T  F+EKA+NYGL TPKG+L+IG+QGSGKSLIAKAV++EW+LPLLRLDVGRLF GVVGESE RVREMI IAESLAPCVLW+DEIDKAF DSEQN DSGTT RVL T +TWL EKTLPVFVIATANDI+SLP+EILRKGRFDEIFF+GIP +++R++I+EVHLK+FRPDTW  YD++RLS+++R+FSGAEIEQ I+DAMY AF+E REFTTND+L A+  TVPIL+I P RT +IQNWA+SG+IR+A
Sbjct:  246 TNSFSEKAINYGLATPKGILLIGVQGSGKSLIAKAVSYEWKLPLLRLDVGRLFGGVVGESEFRVREMIMIAESLAPCVLWIDEIDKAFADSEQNSDSGTTNRVLGTLITWLAEKTLPVFVIATANDIYSLPIEILRKGRFDEIFFIGIPDKEDRRIIFEVHLKKFRPDTWYKYDTRRLSKQSRRFSGAEIEQAIVDAMYAAFNEKREFTTNDILKALARTVPILEIDPVRTDIIQNWASSGKIRMA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A2I4Q2W2_9PHAE (AAA domain-containing protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2W2_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 5.480e-132
Identity = 191/245 (77.96%), Postives = 217/245 (88.57%), Query Frame = 1
Query:    4 EIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            + F+E+A+NYGL+TPKGVL+IGMQGSGKSLIAKAVA+EW+LPLLRLDVGRLF G+VGESESRVR+MI IAESLAPCVLWVDEIDKAF++SEQN D GTT RVL+TF+TWL EKT PVFVIATANDI  LPVEILRKGRFDEIFFLGIP  +ER  I+EVHLKRFRPDTW  +D ++L   + +FSGAEIEQTIIDAMY AFSE REFTTND+L+AI +TVPILDI P RT LIQ+W +SGRIRLA
Sbjct:  247 DTFSEQALNYGLITPKGVLLIGMQGSGKSLIAKAVAYEWRLPLLRLDVGRLFGGLVGESESRVRQMIIIAESLAPCVLWVDEIDKAFSESEQNLDGGTTNRVLSTFITWLSEKTCPVFVIATANDIHCLPVEILRKGRFDEIFFLGIPDLRERHTIFEVHLKRFRPDTWYKFDIQKLGLNSHRFSGAEIEQTIIDAMYYAFSEKREFTTNDILLAINQTVPILDIDPMRTELIQSWTSSGRIRLA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A8F0F738_9PHAE (AAA domain-containing protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F738_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 2.160e-121
Identity = 169/245 (68.98%), Postives = 215/245 (87.76%), Query Frame = 1
Query:    4 EIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            + F+E+A+NYGL+ P+GVLIIG+QGSGKSLIAKAVA+EW+LPLLRLD+GRLF G+VG+SE++VR+MI I ESL+PC+LW+DE+DKAF+++  + DSGTT RVL+T + WLGEKTLPVFVI TANDI  LPVEILRKGRFDEIFFLGIP   ER +I+E+HLKRFRP +W +Y+ K+LSE+ + FSGAEIEQ I++AMYVAFSE REFTT D+L+A+++TVP++DI P RT LI++WA SG+IRLA
Sbjct:  247 DTFSEQAINYGLIPPRGVLIIGIQGSGKSLIAKAVAYEWKLPLLRLDIGRLFGGIVGQSETQVRKMITITESLSPCILWIDEMDKAFSENNPSVDSGTTKRVLSTLIHWLGEKTLPVFVIGTANDIHCLPVEILRKGRFDEIFFLGIPKYDERLIIFELHLKRFRPQSWNSYNIKKLSEKTQNFSGAEIEQAILEAMYVAFSEQREFTTEDILLAVRQTVPLVDIDPLRTELIESWAYSGKIRLA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A6B7EV24_9PHAE (AAA domain-containing protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV24_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.750e-120
Identity = 169/245 (68.98%), Postives = 208/245 (84.90%), Query Frame = 1
Query:    4 EIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            EIFTEKAVNYGLV P+G+L++G +G+GKSL+AKA+A+EW LPLLRLD+GRLFAGVVGESESR REMI I ESLAPC LW+DEIDK F DSE + D GTT RVL T  TWL EK +PVFVIATANDI  LP+EI+RKGRFDEIF L IP  ++R +I+E+HL+RFRP TW+TYD+K+LS+   KFSGAEIEQTII+AMYVAF+E+REF TND+L+AIK+TVP+  I P R  +++ W++SGR+R+A
Sbjct:  247 EIFTEKAVNYGLVAPRGLLLVGSEGTGKSLLAKAIAYEWNLPLLRLDIGRLFAGVVGESESRTREMIRITESLAPCALWIDEIDKTFADSEMSLDGGTTLRVLGTLATWLAEKKVPVFVIATANDIHLLPLEIVRKGRFDEIFHLTIPNREDRIVIFEIHLRRFRPQTWKTYDTKKLSKATNKFSGAEIEQTIIEAMYVAFTEDREFNTNDILLAIKKTVPMTRIDPLRAEVVEGWSSSGRLRMA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A6G6D7R3_ECTSI (AAA domain-containing protein n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7R3_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 4.960e-120
Identity = 165/246 (67.07%), Postives = 211/246 (85.77%), Query Frame = 1
Query:    1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            +EIF+EKA+NYGLV P+G+L+IG +G+GKSL+AKA+A+EW+LPLLRLD+GRLFAGVVGESESR REMI I ESLAPC LW+DE+DK F DSE + D GTT RVL T  TWL EK +PVFVIATAND+  LP+EI+RKGRFDEIF L IP+ ++R LI+E+HL+RFRP TW+TYD+K+LS+ + KFSGAEIEQTII+AMY AF+E REFTTND+L+A+++TVP+  I P R  +++ W++SGR+R+A
Sbjct:  246 SEIFSEKAINYGLVAPRGLLLIGSEGTGKSLLAKAIAYEWKLPLLRLDIGRLFAGVVGESESRTREMIRITESLAPCALWIDEMDKTFADSEMSLDGGTTLRVLGTLATWLAEKKVPVFVIATANDLHLLPLEIVRKGRFDEIFHLNIPSREDRVLIFEIHLRRFRPQTWKTYDTKKLSKASNKFSGAEIEQTIIEAMYAAFTEKREFTTNDILLAVRKTVPMTRIDPLRAEVVEGWSSSGRLRMA 491          
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A7S6U9T6_9STRA (Ycf46 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9T6_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.110e-113
Identity = 162/243 (66.67%), Postives = 203/243 (83.54%), Query Frame = 1
Query:   10 FTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
            F+E A NYGL  P+GVL+IG+QGSGKSL+AK VA EW+LPLLRLDVGRLF G++GESESRVR+MI IAESLAPC+LWVDEIDKAF +S Q+ D+GTT+RVL TF+TWL EK +PVFVIATAN+I+ LPVEILRKGRFDEIFF+G+P  +ER++I++VHL R RP+TW  Y+   LS +   FSGAEIEQ+I +AM+ AFS+ REFTT D+  AIK+T+P++ I P+R  ++Q WA SGRIR+A
Sbjct:  249 FSELATNYGLAIPRGVLLIGIQGSGKSLVAKGVAAEWKLPLLRLDVGRLFGGIMGESESRVRQMISIAESLAPCILWVDEIDKAFAESTQSMDNGTTSRVLGTFLTWLAEKEVPVFVIATANNIYMLPVEILRKGRFDEIFFIGLPNREERRMIFKVHLSRLRPETWSKYNLDLLSRQTNDFSGAEIEQSITEAMHTAFSQKREFTTTDISKAIKQTIPLVRIDPERLDMVQEWAYSGRIRIA 491          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FAK8_9PHAE1.310e-16799.19AAA domain-containing protein n=1 Tax=Desmarestia ... [more]
A0A0S0GAM3_COSCS4.600e-15389.43Ycf46 n=28 Tax=Laminariales TaxID=2886 RepID=A0A0S... [more]
A0A2R4QPR8_9PHAE6.710e-14381.71AAA domain-containing protein n=15 Tax=Fucales Tax... [more]
UPI001FA7AF617.730e-14281.30hypothetical protein Ycf46 n=1 Tax=Silvetia siliqu... [more]
A0A8E6D2J5_9PHAE3.360e-13376.02AAA domain-containing protein n=1 Tax=Ishige okamu... [more]
A0A2I4Q2W2_9PHAE5.480e-13277.96AAA domain-containing protein n=1 Tax=Dictyopteris... [more]
A0A8F0F738_9PHAE2.160e-12168.98AAA domain-containing protein n=1 Tax=Protohalopte... [more]
A0A6B7EV24_9PHAE1.750e-12068.98AAA domain-containing protein n=1 Tax=Cladosiphon ... [more]
A0A6G6D7R3_ECTSI4.960e-12067.07AAA domain-containing protein n=9 Tax=Ectocarpales... [more]
A0A7S6U9T6_9STRA1.110e-11366.67Ycf46 n=1 Tax=Schizocladia ischiensis TaxID=196139... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145765contigH-elongata_contig145765:2..742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.0
Seed ortholog evalue1.8e-96
Seed eggNOG ortholog2880.D1J781
Preferred nameycf46
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size741
Cds size741
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929867.4691331-CDS-H-elongata_contig145765:1..7421622929867.4691331-CDS-H-elongata_contig145765:1..742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig145765 2..742 +
1691679188.2155073-CDS-H-elongata_contig145765:1..7421691679188.2155073-CDS-H-elongata_contig145765:1..742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig145765 2..742 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145765.3128.1prot_H-elongata_contig145765.3128.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig145765 2..742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig145765.3128.1

>prot_H-elongata_contig145765.3128.1 ID=prot_H-elongata_contig145765.3128.1|Name=mRNA_H-elongata_contig145765.3128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp
TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVG
RLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTT
TRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPT
EKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYV
AFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA*
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mRNA from alignment at H-elongata_contig145765:2..742+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig145765.3128.1 ID=mRNA_H-elongata_contig145765.3128.1|Name=mRNA_H-elongata_contig145765.3128.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=741bp|location=Sequence derived from alignment at H-elongata_contig145765:2..742+ (Himanthalia elongata Himel1 dioecious)
ACAGAAATTTTTACTGAAAAAGCTGTTAACTATGGATTAGTAACCCCTAA AGGAGTTTTAATTATTGGAATGCAAGGAAGTGGAAAAAGTTTAATTGCAA AAGCTGTTGCTTTTGAATGGCAATTACCACTTCTCCGTTTAGATGTTGGA AGATTATTTGCTGGTGTTGTCGGAGAATCAGAATCTAGGGTTCGCGAAAT GATAGGTATTGCAGAATCATTAGCTCCTTGTGTTTTATGGGTTGATGAAA TTGACAAGGCATTTACTGATTCGGAGCAAAATTTTGATAGTGGAACAACA ACAAGGGTTTTAGCTACATTTGTTACTTGGTTGGGAGAAAAAACCCTTCC TGTCTTTGTAATAGCTACAGCTAATGATATTTTTTCTTTACCTGTTGAAA TATTACGAAAAGGTAGATTTGATGAAATCTTTTTTCTAGGAATACCTACT GAAAAAGAAAGACAATTAATTTATGAAGTACATTTAAAACGCTTTAGACC TGACACTTGGGAAACTTATGATAGTAAAAGATTAAGTGAGAGAGCTCGAA AATTTTCTGGTGCAGAGATTGAGCAAACGATTATTGATGCAATGTATGTT GCTTTTAGTGAAAATAGAGAATTTACAACAAATGATGTCTTAATTGCTAT TAAGGAAACTGTTCCAATTCTTGATATTGCTCCCCAACGTACACGTTTAA TCCAGAATTGGGCCACATCAGGACGAATTCGACTAGCCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig145765:2..742+

>mRNA_H-elongata_contig145765.3128.1 ID=mRNA_H-elongata_contig145765.3128.1|Name=mRNA_H-elongata_contig145765.3128.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1482bp|location=Sequence derived from alignment at H-elongata_contig145765:2..742+ (Himanthalia elongata Himel1 dioecious)
ACAGAAATTTTTACTGAAAAAGCTGTTAACTATGGATTAGTAACCCCTAA
AGGAGTTTTAATTATTGGAATGCAAGGAAGTGGAAAAAGTTTAATTGCAA
AAGCTGTTGCTTTTGAATGGCAATTACCACTTCTCCGTTTAGATGTTGGA
AGATTATTTGCTGGTGTTGTCGGAGAATCAGAATCTAGGGTTCGCGAAAT
GATAGGTATTGCAGAATCATTAGCTCCTTGTGTTTTATGGGTTGATGAAA
TTGACAAGGCATTTACTGATTCGGAGCAAAATTTTGATAGTGGAACAACA
ACAAGGGTTTTAGCTACATTTGTTACTTGGTTGGGAGAAAAAACCCTTCC
TGTCTTTGTAATAGCTACAGCTAATGATATTTTTTCTTTACCTGTTGAAA
TATTACGAAAAGGTAGATTTGATGAAATCTTTTTTCTAGGAATACCTACT
GAAAAAGAAAGACAATTAATTTATGAAGTACATTTAAAACGCTTTAGACC
TGACACTTGGGAAACTTATGATAGTAAAAGATTAAGTGAGAGAGCTCGAA
AATTTTCTGGTGCAGAGATTGAGCAAACGATTATTGATGCAATGTATGTT
GCTTTTAGTGAAAATAGAGAATTTACAACAAATGATGTCTTAATTGCTAT
TAAGGAAACTGTTCCAATTCTTGATATTGCTCCCCAACGTACACGTTTAA
TCCAGAATTGGGCCACATCAGGACGAATTCGACTAGCCTAAACAGAAATT
TTTACTGAAAAAGCTGTTAACTATGGATTAGTAACCCCTAAAGGAGTTTT
AATTATTGGAATGCAAGGAAGTGGAAAAAGTTTAATTGCAAAAGCTGTTG
CTTTTGAATGGCAATTACCACTTCTCCGTTTAGATGTTGGAAGATTATTT
GCTGGTGTTGTCGGAGAATCAGAATCTAGGGTTCGCGAAATGATAGGTAT
TGCAGAATCATTAGCTCCTTGTGTTTTATGGGTTGATGAAATTGACAAGG
CATTTACTGATTCGGAGCAAAATTTTGATAGTGGAACAACAACAAGGGTT
TTAGCTACATTTGTTACTTGGTTGGGAGAAAAAACCCTTCCTGTCTTTGT
AATAGCTACAGCTAATGATATTTTTTCTTTACCTGTTGAAATATTACGAA
AAGGTAGATTTGATGAAATCTTTTTTCTAGGAATACCTACTGAAAAAGAA
AGACAATTAATTTATGAAGTACATTTAAAACGCTTTAGACCTGACACTTG
GGAAACTTATGATAGTAAAAGATTAAGTGAGAGAGCTCGAAAATTTTCTG
GTGCAGAGATTGAGCAAACGATTATTGATGCAATGTATGTTGCTTTTAGT
GAAAATAGAGAATTTACAACAAATGATGTCTTAATTGCTATTAAGGAAAC
TGTTCCAATTCTTGATATTGCTCCCCAACGTACACGTTTAATCCAGAATT
GGGCCACATCAGGACGAATTCGACTAGCCTAA
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