mRNA_H-elongata_contig14466.3069.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: D7G4D2_ECTSI (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D2_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 2.170e-172 Identity = 235/287 (81.88%), Postives = 255/287 (88.85%), Query Frame = 1
Query: 178 VLGPRWSPYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCGHF 1038
+LGPRWSPYGRLAR+DKPAGT+LLL PCWWSIALAAPM TLPD +++ALFATG+ +MRSAGCTINDLWD+D DR+V RTK+RPLASGELG TQAI FLG QLTLGLGVLL+LNIECIKLGFA MPLVVAYPLMKRYT+WPQAVLGLTFNWGAIMGWAAVHGS S HVLPLYGAG CWT+VYDTLYGHQDK DDKRLGIRSTALLF D+TKPILAGF A+VGLL +G A LSWPF+AGT A GH AWQI SA+LEDP GLFK F+SNQ GALVFASIVCGHF
Sbjct: 1 MLGPRWSPYGRLARIDKPAGTLLLLFPCWWSIALAAPMGTLPDAKLMALFATGSVLMRSAGCTINDLWDKDFDRKVTRTKQRPLASGELGNTQAIAFLGAQLTLGLGVLLSLNIECIKLGFAVMPLVVAYPLMKRYTDWPQAVLGLTFNWGAIMGWAAVHGSASWEHVLPLYGAGFCWTLVYDTLYGHQDKADDKRLGIRSTALLFGDRTKPILAGFGTASVGLLAASGVAMDLSWPFFAGTAAAGGHLAWQISSADLEDPAGLFKIFRSNQNFGALVFASIVCGHF 287
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A6H5JSZ9_9PHAE (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ9_9PHAE) HSP 1 Score: 494 bits (1271), Expect = 4.370e-172 Identity = 242/310 (78.06%), Postives = 266/310 (85.81%), Query Frame = 1
Query: 109 GNDTSQSGGTRTCFKDESSLVLRVLGPRWSPYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCGHF 1038
G+ +S SGG + S VLR+LGPRWSPYGRLAR+DKPAGT+LLL PCWWSIALAAPM TLPD +++ALFATG+ +MRSAGCTINDLWD+D DR+V RTK+RPLASGELG TQAI FLG QLTLGLGVLL+LNIECIKLG A MPLVVAYPLMKRYT+WPQAVLGLTFNWGAIMGWAAVHGS S HVLPLYGAGVCWT+VYDTLYGHQDK DDKRLGIRSTALLF D+TKPILAGF A+VGLL +G A LSWPF+AGT A GH AWQI SA+LEDP GLF+ F+SNQ G LVFASIVCGHF
Sbjct: 118 GSFSSGSGGDGL---ESDSAVLRMLGPRWSPYGRLARIDKPAGTLLLLFPCWWSIALAAPMGTLPDAKLMALFATGSVLMRSAGCTINDLWDKDFDRKVTRTKQRPLASGELGNTQAIAFLGAQLTLGLGVLLSLNIECIKLGLAVMPLVVAYPLMKRYTDWPQAVLGLTFNWGAIMGWAAVHGSASWEHVLPLYGAGVCWTLVYDTLYGHQDKADDKRLGIRSTALLFGDRTKPILAGFGTASVGLLTASGVTAELSWPFFAGTAAAGGHLAWQIYSADLEDPAGLFRIFRSNQNFGTLVFASIVCGHF 424
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A835ZKZ5_9STRA (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKZ5_9STRA) HSP 1 Score: 387 bits (995), Expect = 3.820e-132 Identity = 188/289 (65.05%), Postives = 225/289 (77.85%), Query Frame = 1
Query: 169 VLRVLGPRWSPYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCGH 1035
+LR+LG R++PYGRLAR+DKP GTMLLL PCWWS ALAAP LPD ++LALF TGAF+MRSAGC INDLWD+D D+ V RTK+RPLASGEL T A + LGG LT GLGVLL+LN EC KLGFAAMPLV++YPL KR T WPQAVLGL NWGA++GW AVHG VLPLY AGVCWT+VYDTLYGHQDK DD++LG++ST+LLF ++TKP+L GF A + L G+AA L PFY GT A A H A Q+ +A+LE+P LF F+SNQ +GA++ SIV G+
Sbjct: 1 MLRLLGTRFAPYGRLARVDKPIGTMLLLWPCWWSTALAAPAGALPDFKLLALFGTGAFVMRSAGCIINDLWDKDFDKSVERTKDRPLASGELSTRDAFVLLGGSLTAGLGVLLSLNTECWKLGFAAMPLVISYPLTKRVTWWPQAVLGLAMNWGALVGWTAVHGYTDWGLVLPLYSAGVCWTMVYDTLYGHQDKRDDQKLGLKSTSLLFGERTKPVLGGFTAVCISSLVYTGYAAHLGLPFYVGTAAAAAHLARQVYTADLENPEQLFSLFRSNQYVGAILMGSIVTGN 289
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A5D6Y274_9STRA (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y274_9STRA) HSP 1 Score: 363 bits (932), Expect = 7.830e-122 Identity = 189/322 (58.70%), Postives = 228/322 (70.81%), Query Frame = 1
Query: 70 QRHIPPRTRISHIGNDTSQSGGTRTCFKDESSLVLRVLGPRWS-PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCG 1032
Q +PPR + FK E P+W PY +LARL++PAGT +LL PC+WSI+LAAP LPDV +LALF TGAFIMRSAGCTIND+WD+D D++V RT +RPLASG + QA FL QLT GLG+L+ LN + LG +++ LV AYPLMKR T WPQA LGLTFN+GA++G+AAVHG+ + P VLPLY GV WTIVYDTLY HQDK DD+++G+RSTALLF TKPIL F+AAAV LG AG AAGL WPFYAG + AGH AWQ+ +A L+DP L +RF SN+ GALVFASIV G
Sbjct: 19 QLRLPPRASMFARAFVKMPGKLVEDAFKLEKDTWAERYCPKWMVPYVQLARLNRPAGTYMLLWPCFWSISLAAPAGQLPDVGLLALFGTGAFIMRSAGCTINDMWDKDFDKQVERTNKRPLASGAITYPQAWGFLAAQLTAGLGILMQLNWYSVALGASSLALVGAYPLMKRVTYWPQAFLGLTFNYGALLGYAAVHGACAWPVVLPLYAGGVAWTIVYDTLYAHQDKSDDEQIGVRSTALLFGANTKPILNAFSAAAVAGLGAAGFAAGLDWPFYAGLLGGAGHLAWQVNTAELDDPVNLQQRFGSNKWFGALVFASIVAG 340
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A8K1FJN4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJN4_PYTOL) HSP 1 Score: 362 bits (928), Expect = 7.580e-121 Identity = 184/300 (61.33%), Postives = 221/300 (73.67%), Query Frame = 1
Query: 136 TRTCFKDESSLVLRVLGPRWS-PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCG 1032
T FK E + P+W PY +LARL++PAGT +LL PC+WSI+LAAP +LPD+ MLALF TGAFIMRSAGCTIND+WD+D D++V RT +RPLASG L QA FL QL+ GLG+L+ LN I LG ++M LVVAYPLMKR T WPQA LGLTFN+GA++GW+AV GS + P LPLY GV WT+VYDTLY HQDK+DD+ +G+RSTALLF D TKPIL F+AAAV GTAG+ GL WPFYAG A H AWQ+ +A L+DP L RF SN+ GAL+FASIV G
Sbjct: 67 TDDAFKIEKNTWAERHAPKWMVPYIQLARLNRPAGTYMLLWPCFWSISLAAPAGSLPDLGMLALFGTGAFIMRSAGCTINDMWDKDFDKQVERTNQRPLASGALTYPQAWRFLALQLSAGLGILMQLNWYSIALGASSMGLVVAYPLMKRVTYWPQAFLGLTFNYGALLGWSAVQGSCAWPVCLPLYAGGVAWTLVYDTLYAHQDKNDDRHIGVRSTALLFGDNTKPILNAFSAAAVAGFGTAGYMVGLDWPFYAGLAGGAAHLAWQVNTAKLDDPINLQTRFASNKWFGALMFASIVAG 366
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: K3WTS4_GLOUD (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS4_GLOUD) HSP 1 Score: 356 bits (914), Expect = 3.280e-118 Identity = 183/322 (56.83%), Postives = 228/322 (70.81%), Query Frame = 1
Query: 79 IPPRTRISHI---GNDTSQSGGTRTCFKDESSLVLRVLGPRWS-PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCG 1032
+PP I + +D + T FK E P W PY +L+R+++PA +LL PC+WSI+LAAP +LPD+ +L LF TGA IMRSAGCTIND+WD+D D++V RT +RPLASG + QA FL QL+ GLG+LL LN + LG +++ LV AYPLMKR T WPQA LGLTFN+GAI+GWAAVHGS + P VLPLY GV WTIVYDTLY HQDK DD ++G+RSTALLF D TKPIL FA A + +G+AG+AAGL WPFYAG + AGH AWQ+ +AN++DP L +RF SN+ GAL+FASIV G
Sbjct: 82 LPPAAPIPSLTLKADDDREKADAGT-FKLEKDTWAERHAPAWMVPYIQLSRINRPAAAHMLLWPCFWSISLAAPAGSLPDLGLLMLFGTGALIMRSAGCTINDMWDKDFDKQVERTNKRPLASGTITYPQAWGFLAAQLSAGLGILLQLNWYSVALGASSLGLVAAYPLMKRVTYWPQAFLGLTFNYGAILGWAAVHGSCAWPVVLPLYAGGVAWTIVYDTLYAHQDKKDDAQIGVRSTALLFGDNTKPILNAFAVATIAGIGSAGYAAGLDWPFYAGLLGGAGHLAWQVNTANVDDPINLQQRFGSNKWFGALMFASIVAG 402
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A0W8DZV0_PHYNI (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DZV0_PHYNI) HSP 1 Score: 354 bits (908), Expect = 1.680e-117 Identity = 176/318 (55.35%), Postives = 225/318 (70.75%), Query Frame = 1
Query: 85 PRTRISHIGNDTSQSGGTRTCFKDESSLVLRVLGPRWS-PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCGH 1035
P T+ H + + + FK E P W PY ++AR+++PA T LLL PC+WSIA+AAP LPD+++LALF TGAFIMRSAGCTIND+WD+D D++V RT +RPLA+G+L QA FL GQL+ GL VL+ LN + +G +++ LV YP MKR+T WPQAVLGLTFN+GA++GWAAVHGS VLPLY GV WT+VYDTLY HQDK DD ++G+RSTALLF D+TKP+L F+AAA+ GTAG+ AGL WPF+ G A H AWQ+ +A L+DP L RF SN+ GAL+FAS+V G+
Sbjct: 72 PHTKQDHEQDKSGDLESKKDVFKIEKDTWAERHAPEWMLPYIQVARINRPAPTFLLLWPCYWSIAMAAPAGQLPDLKLLALFGTGAFIMRSAGCTINDMWDKDFDKQVERTNKRPLAAGKLTYPQAWGFLAGQLSAGLAVLMQLNWYSVAMGASSLALVATYPTMKRFTYWPQAVLGLTFNYGALLGWAAVHGSCDWSVVLPLYAGGVAWTLVYDTLYAHQDKKDDVKIGVRSTALLFGDKTKPVLNFFSAAAIAGFGTAGYMAGLDWPFFMGLSGGAAHLAWQVNTAKLDDPINLQARFGSNKWFGALMFASVVAGN 389
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: H3G9S6_PHYRM (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=2 Tax=Phytophthora TaxID=4783 RepID=H3G9S6_PHYRM) HSP 1 Score: 347 bits (891), Expect = 1.660e-116 Identity = 168/279 (60.22%), Postives = 213/279 (76.34%), Query Frame = 1
Query: 199 PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCGH 1035
PY +++R+++PAGT +LL PC+WSI++AAP LPD+ +LALF TGAF+MRSAGCTIND+WD+D D++V RT +RPLA+G+L QA FL GQL+ GL VLL LN + +G +++ LV AYP MKR+T WPQA LGLTFN+GA++GWAAVHGS P VLPLY GV WT+VYDTLY HQDK DD ++G+RSTALLF D TKPIL F+AAA+ GTAG+ AGL WPF+ G A AWQ+ +A L+DP L RF SN+ +GAL+FASIV G+
Sbjct: 3 PYVQISRINRPAGTFMLLWPCFWSISMAAPTGQLPDLSLLALFGTGAFVMRSAGCTINDMWDKDFDKQVERTNKRPLAAGKLTYPQAWGFLAGQLSAGLAVLLQLNWYSVAMGASSLALVAAYPTMKRFTYWPQAFLGLTFNYGALLGWAAVHGSCEWPVVLPLYAGGVAWTLVYDTLYAHQDKKDDVKIGVRSTALLFGDNTKPILNVFSAAAIAGFGTAGYMAGLDWPFFLGLTGGAAQLAWQVNTAKLDDPINLQTRFASNKWLGALMFASIVAGN 281
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A1V9ZD69_9STRA (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD69_9STRA) HSP 1 Score: 350 bits (897), Expect = 1.690e-116 Identity = 177/296 (59.80%), Postives = 216/296 (72.97%), Query Frame = 1
Query: 148 FKDESSLVLRVLGPRWS-PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSVSLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCG 1032
F E P W PY +LAR+++PAGT +LL P +WS ALAAPM PD ++L LFATGAFIMR AGCTIND+WD+D D++V RT +RPLASG L +QA FL QL+ GLGVL+ LN I LG +++ V AYP MKR T WPQA+LGLTFN+GA++GWAAVHGS VLPLYGAG+ WT+VYDTLY HQDK+DDKR+G++STALLF + TKPIL F+AA + LGTAG+ GLS PFY G A AGH AWQ+ +A + DP L +RF SN+ GAL+FASIV G
Sbjct: 47 FAIEKKTWAEKYSPEWMLPYIQLARINRPAGTYMLLWPTFWSTALAAPMGAFPDPKLLGLFATGAFIMRGAGCTINDMWDKDFDKQVERTNQRPLASGALTYSQAWKFLALQLSAGLGVLIQLNPYTIGLGASSLAFVAAYPYMKRVTYWPQAMLGLTFNYGALVGWAAVHGSCDWSVVLPLYGAGISWTLVYDTLYAHQDKNDDKRIGVKSTALLFGENTKPILNAFSAATILGLGTAGYMVGLSAPFYMGLSAAAGHLAWQVNTAKINDPLNLQERFASNKYFGALIFASIVAG 342
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Match: A0A7S4D5R8_HETAK (4-hydroxybenzoate polyprenyltransferase, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5R8_HETAK) HSP 1 Score: 351 bits (900), Expect = 1.840e-116 Identity = 178/286 (62.24%), Postives = 213/286 (74.48%), Query Frame = 1
Query: 193 WS---PYGRLARLDKPAGTMLLLLPCWWSIALAAPMYTLPDVQMLALFATGAFIMRSAGCTINDLWDRDLDRRVARTKERPLASGELGTTQAILFLGGQLTLGLGVLLNLNIECIKLGFAAMPLVVAYPLMKRYTNWPQAVLGLTFNWGAIMGWAAVHGSV---SLPHVLPLYGAGVCWTIVYDTLYGHQDKDDDKRLGIRSTALLFNDQTKPILAGFAAAAVGLLGTAGHAAGLSWPFYAGTMAMAGHFAWQIGSANLEDPPGLFKRFKSNQEIGALVFASIVCG 1032
WS PY RL+RLDKP GTMLLL PC WS+A+AAP + PD++++ALF+TG+FIMRSAGCTINDLWD++ D +V RTK RPLA+GE+G QA+ FLG QLT GLGVLL LN CI +GF MPLVVAYPLMKR T+WPQ VLGL FNWGA+MG AA G+V +L PLY V WT+VYDTLY HQDK DDK+LG++STAL F D TKPIL GF+ VG L +G+ A L+WPFY G A A H WQIG+A LE+ L++RF SN +G +V ASIV G
Sbjct: 90 WSKIEPYFRLSRLDKPIGTMLLLHPCLWSLAIAAPAGSFPDMKLVALFSTGSFIMRSAGCTINDLWDKNYDAKVERTKNRPLATGEIGVPQAVSFLGLQLTAGLGVLLQLNTPCILMGFGVMPLVVAYPLMKRVTHWPQLVLGLAFNWGALMGHAAATGAVDAAALAVTGPLYAGAVAWTLVYDTLYAHQDKKDDKQLGLKSTALYFGDNTKPILHGFSLITVGGLTLSGYMADLAWPFYIGMTATAAHLNWQIGTAELENSANLWERFTSNNTLGGIVGASIVAG 375 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14466.3069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14466.3069.1 >prot_H-elongata_contig14466.3069.1 ID=prot_H-elongata_contig14466.3069.1|Name=mRNA_H-elongata_contig14466.3069.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=347bp MVRSISSKVGSGHVKNSDETQKQQRHIPPRTRISHIGNDTSQSGGTRTCFback to top mRNA from alignment at H-elongata_contig14466:2587..7287+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14466.3069.1 ID=mRNA_H-elongata_contig14466.3069.1|Name=mRNA_H-elongata_contig14466.3069.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4701bp|location=Sequence derived from alignment at H-elongata_contig14466:2587..7287+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14466:2587..7287+ >mRNA_H-elongata_contig14466.3069.1 ID=mRNA_H-elongata_contig14466.3069.1|Name=mRNA_H-elongata_contig14466.3069.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2082bp|location=Sequence derived from alignment at H-elongata_contig14466:2587..7287+ (Himanthalia elongata Himel1 dioecious)back to top |