mRNA_H-elongata_contig14464.3066.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: D8LS95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS95_ECTSI) HSP 1 Score: 353 bits (906), Expect = 4.310e-116 Identity = 171/240 (71.25%), Postives = 200/240 (83.33%), Query Frame = 2
Query: 2 IGSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGLEDCQLRPWVF 721
+G+GLRPRESYH++RK FHF+TIM FAV YSAKLP+ +F+R MA +D V ELARLR++ VNRV+F +F FMRAHEL+KFSGIMYCLAGLG+TSA+FPKHIALLGM+QLA+GDP AALCGHATRSV WSR+ +GKGLLGALGCA LTLAN L KA FE P + RI+LA +IA W AAVE SVPSPQKTL +GFPLAFDDNA LPVLGA+GAA+VFR+LGL C+LRPW+F
Sbjct: 63 LGAGLRPRESYHISRKTFHFSTIMAFAVVYSAKLPQRDFARGMAALDACVLAGELARLRVDVVNRVLFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMLQLALGDPVAALCGHATRSVGWSRVGTGKGLLGALGCATALTLANSFVLAKARFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLF 302
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A5J4YXT9_PORPP (CTP-dependent diacylglycerol kinase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXT9_PORPP) HSP 1 Score: 146 bits (369), Expect = 2.140e-36 Identity = 93/228 (40.79%), Postives = 125/228 (54.82%), Query Frame = 2
Query: 5 GSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLG 688
G+ L RESYH ARK+FHF T A+AY L + +F ++ V +TE ARL+ ++N+VV F PFMRAHE KFSG+ Y + G +AL K A+LG++ LA DP AAL G T+S W+RL++GK +LG +V F ++ + + LA IA+ A E VPSPQ TL Y FPL DDN +PV+ A A F +G
Sbjct: 71 GNRLPTRESYHPARKLFHFLTGYMIALAYHLFLSKAQFCVISTVVAGSVLVTEAARLQSPAINKVVQMAFGPFMRAHETSKFSGMFYYMFGCATAAALVSKPAAILGILLLAALDPIAALFGTFTKSQTWARLKNGKSVLGFFFAFLVALNLVFRCAMRSPDGLGMDALVFLKLACT-IASCGALTELIVPSPQLTLPYAQFPLGIDDNFLIPVVAACVAEASFAFVG 297
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A6U5JUM7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5JUM7_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.170e-24 Identity = 84/254 (33.07%), Postives = 123/254 (48.43%), Query Frame = 2
Query: 14 LRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAA-VEASVPSPQKTLRYDGF-----PLAFDDNATLPVLGALGAAMVFRLLGLE-DCQLRPWVFV 724
L+ R S +L RK+ H + F + + +PR F M ++ EL R R +N + I +R HE+ KF+G +Y G+ +TSALF K A LG+ QLA+ DP+A+ G +TR V WSR+ SG KG LG LG A+ N+ L A F + P ++ LL A+L A + +VP+P + F P DDN +P+ A +F+ L D L P+VF+
Sbjct: 156 LKSRNSMNLRRKVLHAGFGLFFGIL-NHVVPRKYFLGAMTILSTGTLCMELLRYRPGFSWMNDALHTILGGSLRRHEMDGKFTGSLYFFVGVTVTSALFSKAAATLGIFQLAIADPSASYFGRSTRHVYWSRIESGLGGFGRNKGFLGFLGGALACVPLNYQVLRMAQFGKIVPGGQQALLTASLALGMAGAFADLAVPTPALVMPEKVFGVRVPPFHVDDNFVVPIFAGFAATHIFKALSCPTDFTLAPFVFI 408
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A7S4AI34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI34_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.470e-20 Identity = 90/269 (33.46%), Postives = 128/269 (47.58%), Query Frame = 2
Query: 2 IGSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEE---------APPPVERILLAAALIATWTAAVEASVPSPQKTL--RYDGF---PLAFDDNATLPVLGALGAAMVFRL----LGLEDCQLRPWVFV 724
I L+ R + + RK H M FA + +PR F M + + EL R R + +N+ + + +R +E+ KF+G +Y +G+ LTS LFPK A LG+VQLA+ DP+A+ G ATR V WSR+ +G KG+LG LG AV N+ L A+ + A P V I LA + A + VP+P TL R G P DDN +PVL G A V+ L +G + L ++ V
Sbjct: 211 IAKQLKNRNAANKRRKFMHAAWGMLFASLHHF-IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAG---ALADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLS--GWACVYILAAASIGRNELVLAKYLVV 473
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: K0R4U8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4U8_THAOC) HSP 1 Score: 99.4 bits (246), Expect = 8.160e-20 Identity = 78/249 (31.33%), Postives = 120/249 (48.19%), Query Frame = 2
Query: 2 IGSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVF--EEAPPPVERILLAAALIATWTAAVEASVPSP-----QKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGLED 697
I LR R + +L RK H + + FA + +PR F MA++ + EL R R +N V+ +R HE+ KF+G Y AG+ T+ L+P+ A LG++QLA+ DP+A+ G TR+V WSR+ +G KGLLG LG A+ NF A + + P +L A+ L+ A + +VP+P +K L P DDN +P+ +F ++G +
Sbjct: 3 IAKKLRNRNATNLTRKFTHASFGIFFACL-NQIIPRARFVPGMAVVTGTSLLMELLRYRSGFGWINGVLHFFLGKALRKHEMEGKFTGSFYYFAGVTATAYLYPQTAATLGILQLALADPSASYFGKMTRNVYWSRIENGLLGFGRNKGLLGFLGGALFCLPFNFRIFKMARWGAKGVPGGDSALLTASLLLGLAGAFADLAVPTPVLTMPKKVLGVPVPPFHVDDNFVVPIFSGWACVKIFDMMGWDS 250
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A7S4EJ41_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ41_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.150e-19 Identity = 90/269 (33.46%), Postives = 128/269 (47.58%), Query Frame = 2
Query: 2 IGSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEE---------APPPVERILLAAALIATWTAAVEASVPSPQKTL--RYDGF---PLAFDDNATLPVLGALGAAMVFRL----LGLEDCQLRPWVFV 724
I L+ R + + RK H M FA + +PR F M + + EL R R + +N+ + + +R +E+ KF+G +Y +G+ LTS LFPK A LG+VQLA+ DP+A+ G ATR V WSR+ +G KG+LG LG AV N+ L A+ + A P V I LA + A + VP+P TL R G P DDN +PVL G A V+ L +G + L ++ V
Sbjct: 331 IAKQLKNRNAANKRRKFMHAAWGMLFASLHHF-IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAG---ALADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLS--GWACVYILAAASIGRNELVLAKYLVV 593
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A1E7F8F4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F8F4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.580e-17 Identity = 81/265 (30.57%), Postives = 122/265 (46.04%), Query Frame = 2
Query: 2 IGSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG--------KGLLGALGCAV--------VLTLA-NFVTLYKAVFEEAPPPVER-------ILLAAALIATWTAAVEASVPSPQKTLRYDGF-----PLAFDDNATLPVLGALGAAMVFR-LLGLED 697
I L+ R + + RK HF + FA + + LPR F M+ + EL R R + +N + +F +R E+ KF+G +Y AG+ TS L+P+ A LG++QLA+ DPTA+ G ATR V WSR+ G KG+LG LG + +L+LA N V ++ IL+A+ ++ A + VP+P TL P DDN +PVL +F+ +LG+
Sbjct: 4 IAKKLKNRNATNKRRKFMHFAWGILFA-SLNHFLPRSTFLPIMSTLTAITLFMELMRYREGFQWINTSMHYLFGKSLRKSEMDGKFTGSLYYFAGVTATSYLYPQSCATLGIIQLAIADPTASYFGRATRHVYWSRINKGFAGGLGRNKGILGFLGGGLACVPINYRILSLACNTVVRSSSIGASGAGASTALAISNPTILIASLVLGLAGAFADLIVPTPALTLPKTICGKTVPPFHLDDNFIVPVLSGYACTQIFKYVLGVPS 267
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: UPI001989E47C (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=UPI001989E47C) HSP 1 Score: 90.9 bits (224), Expect = 3.240e-17 Identity = 63/225 (28.00%), Postives = 101/225 (44.89%), Query Frame = 2
Query: 14 LRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLG 688
LR R HLARK++H + AV Y P+ + F E ARLR +N + P MR HE+ K SG + +A + L+ A+FPK IA+L ++ LA+GDP +++ G R +GK L+G + ++ FV L +L L+ + + A+ + + PL DDN ++P++ L + F + G
Sbjct: 13 LRLRNDLHLARKVWHCGMGVFMAVFYGIGFPKVVCVLLLIAALSFFLTAEYARLRFPKLNAFAIRVMGPVMRKHEVSKMSGTPFYIASVLLSVAIFPKPIAILSILFLAIGDPVSSIFGITYGDRIGMRFANGKSLIGTAAGMGICSVITFVYL--------------MLTGVPLVPSSSIALAGGLAGGGAEM----IPLDIDDNFSIPLVSGLALWIAFLVFG 219
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A7S2UMT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMT5_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.460e-16 Identity = 74/246 (30.08%), Postives = 114/246 (46.34%), Query Frame = 2
Query: 2 IGSGLRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAA--LIATWTAAVEASVPSP-----QKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLG 688
I L+ R + +RK+ H + FA A + LPR +F M + + EL R R +N ++ +R HE+ KF+G Y G+ + L+PK+ A +G++QLA+ DP+A+ G TR V WSR+ +G KG+LG LG A+ N+ A F P R LA ++ A + +VP+P +K L PL DDN +P+ A + + G
Sbjct: 116 IAKKLKNRNHVNFSRKVTHAAFGIFFA-ALNHVLPREKFLPWMTFVTGSTLLMELLRYRKGFGWINSILHFFLGSSLRKHEMEGKFTGSFYYFLGVTASVYLYPKNAATMGIIQLALADPSASYFGRQTRDVYWSRIENGLGGFGRNKGILGFLGGALFCFPFNYRIFSLAKFGAGGIPGGRASLAGVSLVLGMSGALADLAVPTPALTMPKKVLGVRVPPLHVDDNFVVPLFSAYCYTKILPMFG 360
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A4Q6C3G7_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6C3G7_9PROT) HSP 1 Score: 83.6 bits (205), Expect = 1.940e-14 Identity = 70/232 (30.17%), Postives = 107/232 (46.12%), Query Frame = 2
Query: 14 LRPRESYHLARKIFHFTTIMTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHAT--RSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGLEDCQ 703
L+ R HLARKI+H M +Y L R + +A +F EL RL+ +N + + MR+ E+ + SGI Y + ++ +FPK IA+L +V LAVGDP A+L G +SVR+S +GK L+G + + +L +L +FE +L W +V L P+ DDN +PV+ +VF LL ++ Q
Sbjct: 30 LKLRNDLHLARKIWHCGMGMIMMASYFFWLTRAQAMMWLATAFLFNLGMELGRLKSPELNAHIMKTWGGIMRSCEVNRVSGIPYYIGATLISVTIFPKPIAILSVVCLAVGDPIASLFGITLGDKSVRFS---NGKSLIGTMAGVIACSLVIAASLL--LFESYG------MLRLNRDHFWMLSVIGGFAGGAAELT----PMEIDDNFAIPVISGFVLWLVFILLQIQIIQ 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14464.3066.1 >prot_H-elongata_contig14464.3066.1 ID=prot_H-elongata_contig14464.3066.1|Name=mRNA_H-elongata_contig14464.3066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp MTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPback to top mRNA from alignment at H-elongata_contig14464:386..2720- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14464.3066.1 ID=mRNA_H-elongata_contig14464.3066.1|Name=mRNA_H-elongata_contig14464.3066.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2335bp|location=Sequence derived from alignment at H-elongata_contig14464:386..2720- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14464:386..2720- >mRNA_H-elongata_contig14464.3066.1 ID=mRNA_H-elongata_contig14464.3066.1|Name=mRNA_H-elongata_contig14464.3066.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig14464:386..2720- (Himanthalia elongata Himel1 dioecious)back to top |