mRNA_H-elongata_contig14450.3054.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI) HSP 1 Score: 639 bits (1647), Expect = 1.920e-220 Identity = 360/473 (76.11%), Postives = 389/473 (82.24%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------VKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKG 1344
MGI GLTKLLSDEAPNCMKE+DLDSLTGRKVA+DASMAMYQFLIAVRSGGEGQ+ MLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPP LKGGELAKR KR KAEA+LK ATEAD+K+++DKFS+RLVRVT +HNEDCK LL LMGVPV TAPSEAEAQCAALAREGVVYG ATEDMD+LTF+TPKLLRRMTFSG+ QPILEVDY KLLQGL+LSHEKFVDLC+LCGCDYTGSIKGIGPKKALA VRQHGTIEEIIKHLD KYP+PDDWLEP+ERA++RKXXXXXXXXXXXXXXXXXXXXX KE + S KRER+ + + E E+DDTPPMYRQAR LFLKPEV+ AGE KLKWTDPDE L+KFLVEEKGFNAERVASGI KLK ARKNVSQKRMDSFFSV+P+ N AKK A K K + K G
Sbjct: 1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERAERRKXXXXXXXXXXXXXXXXXXXXXAETANPEAVSEEDVQQKEGDSDSDKAKADTPDHGVSVAKEAADVSAKRERETEDAAESEQEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGAKGKAGG 473
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA) HSP 1 Score: 447 bits (1150), Expect = 1.040e-145 Identity = 282/439 (64.24%), Postives = 331/439 (75.40%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEG-QAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLE---PSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDC---------EDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFF-SVVP 1275
MGI GLTKLL+DE PNC+KE DL+SLTGRK+AIDASMAMYQFLIAVRSG EG A MLTNEAGEVTSHIQGMFNRTI++L+ G+KP Y+FDGKPP LKGGELAKR KR KAE D ++A E ++DKFS+RLVRVT++HNEDCKTLLRLMGVPV A EAEAQCAALAR+GVV+G TEDMD+LTF+TPKL+RR+T + QPI+EVDY +L+GL L+HE+FVD+CILCGCDYT SI+GIGPKKAL +++H +IEEI+KHLD +K+ +P DW+ P+ AK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E D PMY++AR+LFL+P+V A LKWTDP+ L FLVE+ FNAERVA+GI KLK ARK Q RMD+FF S P
Sbjct: 1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGELAKRAAKRVKAETDWQDARENGTTEDVDKFSKRLVRVTTQHNEDCKTLLRLMGVPVVDASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLIRRLT-TNKNQPIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADWIPGETPTPLAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAPVVQEAVPADKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVEKMQFNAERVAAGIKKLKEARKKGGQTRMDTFFKSTAP 438
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA) HSP 1 Score: 419 bits (1078), Expect = 5.920e-135 Identity = 254/468 (54.27%), Postives = 315/468 (67.31%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQA--HMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSER------AKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAVTGKSKGKR 1377
MGI GL L++DEAP KE D+ +L GRKVAIDASMA+YQFLIAVRS A MLTNEAGEVTSHIQG+FNRTIRML+ GVKPCY+FDGKPP LK GELAKR + RTKA+ +LK A E ++ +IDK+S+RLV+VT EHNED K LLRLMGVPV AP EAEAQCAALA+ G+V+ ATEDMD+LTF+TP LL+RMTFS QQ PI+++ + KLL GL ++ E+FVDLCILCGCDY GIGPK AL VR++G +E I+K+LD K+PLP W P+ + A XXXXXXXXXXXXX K A+S + ++ ++ + E P++ + R+LF P V+ LKWT+PDE L+KFLVEEKGFNAERV+SGI KLK + +Q+RMDSFF ++S ++ A AK K S SKGK+
Sbjct: 22 MGIHGLMNLVADEAPESCKEQDIKALVGRKVAIDASMALYQFLIAVRSAEHAGAVTQMLTNEAGEVTSHIQGLFNRTIRMLTNGVKPCYVFDGKPPTLKSGELAKRTKARTKAKEELKAAEEREDAEDIDKYSKRLVKVTREHNEDAKRLLRLMGVPVIEAPGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLLKRMTFSAKQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGWERPAPKPADPAPAAXXXXXXXXXXXXXXXXSEGGSEVTHEENETDAQEPDAKPEPAASAETAQEPEKEQPWE-------PLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKGFNAERVSSGIKKLKEMKGKGTQQRMDSFFKSTGM-------VSSSKRKAAPAKAKPSKKGKISKGKK 475
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA) HSP 1 Score: 390 bits (1003), Expect = 6.240e-125 Identity = 220/445 (49.44%), Postives = 280/445 (62.92%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEG--QAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLD--PTK-YPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEK 1317
MGI GL KLL+DEAP C+KE+ + L+GR VAIDASMA+YQFLIAVRS G+G A MLTNEAGEVTSHIQGMFNRTIR++ GVKP Y+FDGKPP +K GELAKR E+R +A+A LK ATE +IDKF++RLVR T +HNEDCK LL LMG+P TAP EAEA CAALA+ G V+ A TEDMD +TF TP L RR+T + +++ PILE+ K+LQ L+L++E+FVDLCILCGCDY +I GIGPKKAL +R+H +IE + HL+ P+K +P DWL ED +Y+QAR +F+ EV EI KW +P L FLVE+ GFNA+RV +GI KLK A+ + SQ+R+++FF+V+P AK+ + +K
Sbjct: 1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKTATEEGNTEDIDKFTKRLVRATPQHNEDCKELLGLMGIPFLTAPCEAEATCAALAKAGKVFAAGTEDMDVITFGTPVLFRRLTIAASRKLPILEIRLEKVLQELNLTYEQFVDLCILCGCDYCETIFGIGPKKALNAIREHKSIENFLAHLEKHPSKGVTVPHDWL------------------------------------------------------------GEDA---------IYKQARSMFINAEVSDTAEIDFKWKEPSVDELRAFLVEKHGFNADRVMNGIEKLKKAKTSHSQQRLENFFTVIPSSKDTAKRKGADDK 376
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA) HSP 1 Score: 388 bits (997), Expect = 4.870e-124 Identity = 212/431 (49.19%), Postives = 276/431 (64.04%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGE--GQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLD--PTK-YPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVP 1275
MGI GL KLL+DEAP C+KE+ + +L+GR VAIDASMA+YQFL+AVRS GE G A MLTNEAGEVTSHIQGMFNRTIR++ G+KP Y+FDGKPP +K GELAKR E+R A+ +LK ATE +IDKF++RLVR T +HNEDCK LL+LMGVP AP EAEA CAALA+ V+ + TEDMD +TF TP L RR+T + +++ PILE+ K+LQ L+L+HE+FVDLCILCGCDY +I+GIGPKKAL+ +++H IE + HL P+K +PD+WL ED +Y+QAR +F++P+V +++KW DP L +FLVE+ GFN+ERV + I KLK A+ SQ+R++SFF+V+P
Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGELAKRSERRQTAQENLKTATEEGNVEDIDKFNKRLVRATPQHNEDCKELLQLMGVPFINAPCEAEATCAALAKSNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIRLDKVLQELELTHEQFVDLCILCGCDYCDTIRGIGPKKALSAIKEHKNIETFVAHLQQHPSKGITVPDEWL------------------------------------------------------------GEDA---------IYKQARAMFIEPDVVDTSSVEIKWKDPSVEELRQFLVEKHGFNSERVMNAIEKLKKAKTTHSQQRLESFFTVLP 362
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A0P4W461_SCYOL (Flap endonuclease 1 n=2 Tax=Portunidae TaxID=6757 RepID=A0A0P4W461_SCYOL) HSP 1 Score: 387 bits (994), Expect = 7.930e-124 Identity = 207/449 (46.10%), Postives = 278/449 (61.92%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKG 1344
MGI GL+KL++D AP+ +KE ++ + GRKVA+DASM++YQFL+AVR G+ MLT GE TSH+ G F RTIRM+ G+KP Y+FDGKPP +KGGELAKRKE+R +A+ L+ A EA +++KFSRRLV+VT H E+ KTLLRLMG+P AP EAEAQCAALA+ G VYG ATEDMD+LTF TP LLR MTFS A++ PI E +++L+GL+L E+F+D+CIL GCDY SIKG+GPK+A+ +R H ++E ++K LDP KYP+P+DW + +AR LF++PEV +I+LKW++P E +LV+F+ EEKGF+ +R+ +GI KL AR + +Q R+DSFF V+P N A K S+EK K +G
Sbjct: 1 MGILGLSKLIADVAPSAVKENEIKNFFGRKVAVDASMSLYQFLVAVRQEGQ----MLTTADGETTSHLMGFFYRTIRMVENGIKPVYVFDGKPPTMKGGELAKRKERREEAQKALEKAEEAGNAEDVEKFSRRLVKVTKTHTEEAKTLLRLMGIPYVEAPCEAEAQCAALAKAGKVYGVATEDMDALTFGTPILLRHMTFSEARKMPIKEFHLSRVLEGLELKQEEFIDMCILLGCDYCDSIKGVGPKRAIELIRSHKSLESVVKQLDPKKYPVPEDW--------------------------------------------------------------------------PFAEARNLFIEPEVTDPADIELKWSEPQEEKLVEFMCEEKGFSEDRIRNGIKKLTKARNSSTQGRLDSFFKVLPSPNNNANKRKSEEKPGAAKKARG 371
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA) HSP 1 Score: 387 bits (995), Expect = 8.440e-124 Identity = 217/462 (46.97%), Postives = 293/462 (63.42%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGE--GQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLD--PTK-YPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAVTGKSK 1368
MGI GL KLL+DEAP C+KE+ + +L+GR VAIDASMA+YQFL+AVRS GE G A MLTN+AG+VTSHIQGMFNRTIR++ G+KP Y+FDGKPP +KGGELAKR E+R A+ +LK ATE +I+KF++RLVR T +HN DCK LL LMGVP AP EAEA CAALA+ V+ + TEDMD +TF TP L RR+T + +++ PILE+ K+L L+LS+E+FVDLCILCGCDY SI+G+GPKKAL+ +++H +IE + HL P+K +PD+WL ED +Y+QAR +FL+P+V ++ +KW DP+ L +FLV++ GF+ +RV + I KLK A+ + SQ+RM+SFF+V+P + + K+ A +K A +AKG +A G+ K
Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGELAKRTERRQTAQDNLKTATEEGNVEDIEKFNKRLVRATPQHNNDCKELLALMGVPFINAPCEAEATCAALAKHNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIKLDKVLAELELSYEQFVDLCILCGCDYCDSIRGVGPKKALSAIKEHKSIENYVTHLQAHPSKGITVPDEWL------------------------------------------------------------GEDA---------IYKQARAMFLEPDVIDMADVDIKWKDPNVDDLRQFLVDKHGFSLDRVMNAIEKLKKAKTSHSQQRMESFFTVLPSSDSKLKRKAD-DKKAAKAKGTAAAKRGRKK 392
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A6T7HKT1_9STRA (Flap endonuclease 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HKT1_9STRA) HSP 1 Score: 389 bits (999), Expect = 1.420e-123 Identity = 249/438 (56.85%), Postives = 299/438 (68.26%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQ---AHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILE-VDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKL-KAARKNVS-QKRMDSFFSVVPHQNGRAK 1296
MGI GL KLLSDEAP C++E+ L SL GRK+AIDASMA+YQFLIAVRS G A MLTN GE TSHIQG+FNRTIR LS+G++P Y+FDGKPP+LK GEL KR+EKR KA+ LKNA E E DK S+RLVR ++ NEDC LL LMGVPV AP EAEAQ +ALAR G VY ATEDMD+LTF+TP LLR+MTF+ A + ++ +DY K L+GLDL+H++FVDLCIL GCDY SIKG+GPK AL +R+H IE I+KH+D KY +PD W+ RA +++ XX XXXXXXXXXXXXXXXXXXXXX +EL P+Y +AR+LF + EV ++ LKW L KFLV+E GFNAERVA I KL KA +K Q RMDSFF+V P+ N AK
Sbjct: 1 MGIKGLAKLLSDEAPECVREVPLSSLQGRKIAIDASMAIYQFLIAVRSSGNNPNMAAAMLTNAEGETTSHIQGLFNRTIRFLSEGIRPVYVFDGKPPNLKSGELVKRREKREKAQTALKNAQEDGNVEEQDKQSKRLVRAGTKENEDCIRLLNLMGVPVVRAPCEAEAQASALARAGTVYATATEDMDALTFRTPILLRKMTFANASKSDIQTMDYKKALEGLDLNHDQFVDLCILLGCDYCDSIKGVGPKTALKLIREHSDIETILKHIDRNKYTIPDAWIPNEARASEKEDQVKEEXXKAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXEEL--LVPIYVEARRLFKEHEV--LEKVDLKWVPCQPEPLTKFLVDEMGFNAERVAKSIEKLTKALQKTCKPQARMDSFFTVKPNPNAAAK 424
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: FEN1_PHYIT (Flap endonuclease 1 n=24 Tax=Peronosporaceae TaxID=4777 RepID=FEN1_PHYIT) HSP 1 Score: 387 bits (993), Expect = 1.510e-123 Identity = 221/465 (47.53%), Postives = 289/465 (62.15%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEID-LDSLTGRKVAIDASMAMYQFLIAVRSG-GEGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYP---LPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAVTGKSKGKR 1377
MGI GL KLL +EAP+C+KE++ + +L G VAIDASMA+YQFLIA+RS G G + LTN GEVTSH+QGMF+RTIRM+ G+KP Y+FDGKPP +K GELAKR ++R +A+ L+ ATE +ID+F++RLVR T +HNEDCK LLRLMGVP TAP EAEA CAALA+ G VY A TEDMD+LTF P L RR+T S A++ PILE+ + LQ L+++HE+FVDLCILCGCDY SI+G+GPKKA A +++H +IE ++ L K +PD+WL + P+Y+ AR++F+KPEV A E ++KW DP ET LV FLV++ GF +RV S IT+LK ++ SQKR+DSFF+V+P NG +K++ A AKG A T K KGK+
Sbjct: 1 MGIKGLMKLLQEEAPSCIKEVEKMSALAGHAVAIDASMALYQFLIAIRSADGGGPSQALTNADGEVTSHLQGMFSRTIRMMENGLKPVYVFDGKPPVMKSGELAKRSDRRQEAQKALEEATEKGNAEDIDRFNKRLVRATPQHNEDCKELLRLMGVPHITAPCEAEASCAALAKGGRVYAAGTEDMDALTFGVPVLYRRLTVSPAKKIPILEIRLERALQELEMTHEQFVDLCILCGCDYCDSIRGVGPKKAYAGIKEHKSIENFLEVLQKNKSKGVVIPDEWLGEN---------------------------------------------------------------------PIYKNAREMFIKPEVVDAKETEIKWRDPQETELVDFLVKKHGFQEDRVLSAITRLKKSKSTQSQKRLDSFFTVMPSANG------AKKRKAPAAKGGKKAATAK-KGKK 389
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A7S3KWM7_9STRA (Flap endonuclease 1 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWM7_9STRA) HSP 1 Score: 384 bits (987), Expect = 2.810e-122 Identity = 239/456 (52.41%), Postives = 292/456 (64.04%), Query Frame = 1
Query: 1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQ-AHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILE-VDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHL-DPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAA-RKNVS-QKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAV 1353
MGI GL+KLLSDEAP+ M+E++L SL GRK+AIDASMA+YQFLIAVRSGG Q A MLTNE GE TSHIQGMFNRTIR +++G+KP ++FDGKPP K GEL KR+EK LK ATE E DK S+RLVR + NEDC+ LL LMGVPV AP EAEAQ AALA+ G VY TEDMD++TF TP L+R+M F+ A + +++ +DY K + GLDL+H++FVDLCIL GCDY SIKG+GPK AL +R+HG IE IIK + D KY +PDDWL P++ KK XXXXXXX E+E ++ P Y QARKLF + EV +++LKW E L KFLV+E+GFN ERV + I KL+AA +KN Q RMD+FF V P + ASK K A AKGK AV
Sbjct: 1 MGIKGLSKLLSDEAPDSMREVELKSLHGRKIAIDASMAIYQFLIAVRSGGPNQQAVMLTNEQGETTSHIQGMFNRTIRFMTEGIKPVFVFDGKPPQFKNGELMKRREKXXXXXXXLKEATEEGNVEEQDKHSKRLVRAGHKENEDCRKLLTLMGVPVVIAPCEAEAQAAALAKAGKVYATGTEDMDAVTFATPILVRKMAFANASKSMVQTIDYAKAVNGLDLTHDQFVDLCILLGCDYCDSIKGVGPKTALKMIREHGCIENIIKEIGDNKKYGIPDDWL-PNKNQKKDADGEEKXXXXXXXG----------------------------------------VEEEDEEFIPTYVQARKLFNEHEV--VTDVELKWKPCQEEELTKFLVDEQGFNPERVKANIEKLQAAYKKNQKPQMRMDNFFQVKPSAPKQKPNSASKRK-AEPAKGKKKAV 412 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14450.3054.1 >prot_H-elongata_contig14450.3054.1 ID=prot_H-elongata_contig14450.3054.1|Name=mRNA_H-elongata_contig14450.3054.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGback to top mRNA from alignment at H-elongata_contig14450:2698..7903- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14450.3054.1 ID=mRNA_H-elongata_contig14450.3054.1|Name=mRNA_H-elongata_contig14450.3054.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5206bp|location=Sequence derived from alignment at H-elongata_contig14450:2698..7903- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14450:2698..7903- >mRNA_H-elongata_contig14450.3054.1 ID=mRNA_H-elongata_contig14450.3054.1|Name=mRNA_H-elongata_contig14450.3054.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2766bp|location=Sequence derived from alignment at H-elongata_contig14450:2698..7903- (Himanthalia elongata Himel1 dioecious)back to top |