mRNA_H-elongata_contig14399.3023.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: D8LBL3_ECTSI (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL3_ECTSI) HSP 1 Score: 476 bits (1225), Expect = 8.460e-162 Identity = 263/337 (78.04%), Postives = 285/337 (84.57%), Query Frame = 3
Query: 309 PSKSQGLHREYVLRISKETDSFEYCMTEHLRMSGVYWGLMSMALMGRDLQKEMGAEDLVKWVMRCQHENGGFGGNEGHDPHILYTLSALQVLALLGQLERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLDGGKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNGRDGYDSFVPVDAVYALPVPLVEQLGLKSQVREPKPLPKGA 1319
PS + LHR+YV+RIS++TD+FE+CMTEHLRMSGVYWGLM MALMGRDL+KEMGAEDL WVMRCQHE GGFGGNEGHDPHILYTLSALQV+ALLG+L+RVDKDKVAGY GKIDV+KAAEFVGR CRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILS+LKILGKVDWIDG++L+GFILRCQD+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX F+GR+GYDSF+PVDAVYALPVPLVEQLGLKS++REP PLP GA
Sbjct: 20 PSFFEELHRQYVIRISEQTDTFEFCMTEHLRMSGVYWGLMGMALMGRDLRKEMGAEDLASWVMRCQHEGGGFGGNEGHDPHILYTLSALQVMALLGELDRVDKDKVAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKIDVKKAAEFVGR--CRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSSLKILGKVDWIDGARLKGFILRCQDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDGREGYDSFLPVDAVYALPVPLVEQLGLKSEMREPVPLPPGA 354
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A836C9T0_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T0_9STRA) HSP 1 Score: 418 bits (1074), Expect = 3.640e-139 Identity = 244/338 (72.19%), Postives = 270/338 (79.88%), Query Frame = 3
Query: 327 LHREYVLRISKETDSFEYCMTEHLRMSGVYWGLMSMALMGRDLQKEMGAED-LVKWVMRCQ-HENGGFGGNEGHDPHILYTLSALQVLALLGQLERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLDGGKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYF--NGRDGYDSFV--PVDAVYALPVPLVEQLGLKSQVREPKPLPKGAA 1322
LHR+Y+L++SK+ DSFEY MTEHLRMSGVYWGLM +ALMGRD+++EMG L WVMRC GGFGG EGHDPHILYTLSALQVLALLG+L R D V YV+ LQ+ DG+F GD WGEVDTRFSYC L+S+A+LG L GG +DV AA FV R CRNFDGGFGC PGAESHAGQ+FTCVGAL+IAR+LHLVD LLGWWLC RQCDSGGLNGRPEKQADVCYSWWILSAL ILG+ WIDG+ L FILRCQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ +G G D V VD VYALP LV +LGL+SQV EP P AA
Sbjct: 8 LHRQYILKVSKDKDSFEYLMTEHLRMSGVYWGLMGLALMGRDVKEEMGGGGALADWVMRCYCPAEGGFGGGEGHDPHILYTLSALQVLALLGELRRADAAAVTRYVAALQRPDGAFAGDRWGEVDTRFSYCALASLALLGTLRGGAVDVGAAAAFVAR--CRNFDGGFGCAPGAESHAGQVFTCVGALAIARALHLVDAPLLGWWLCARQCDSGGLNGRPEKQADVCYSWWILSALAILGRRAWIDGAALARFILRCQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLKTDGSGGADGIVYCDVDPVYALPSALVRELGLESQVLEPVPAAAAAA 343
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A7S3Y0P3_HETAK (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0P3_HETAK) HSP 1 Score: 377 bits (967), Expect = 8.660e-123 Identity = 213/341 (62.46%), Postives = 255/341 (74.78%), Query Frame = 3
Query: 330 HREYVLRISKETDSFEYCMTEHLRMSGVYWGLMSMALMGRDLQKEMGAEDLVKWVMRCQHENGGFGGNEGHDPHILYTLSALQVLALLGQLERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLDGGK-IDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNGRDGYDSFVP-----------------VDAVYALPVPLVEQLGLKSQVREP 1298
H +++L + ++T SFE M EHLRMS VYWGL +A MG+D + + +LV+WV+ CQH+ GGFGGN DPH+LYTLSA+Q+LAL G L++VD DKVAGY++ LQQ DGSF+GD+WGEVDTRFSYC LS +A+LG+L + +DV+ AAEFVGR CRNFDGG+GC+PGAESHAGQ+FTCVGALSIA L L D LLGWWL ERQCD+GGLNGRPEKQADVCYSWWILSAL ILGKV WI+ +L+ FIL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXX YF+G +D V+ALP LV LGL++Q P
Sbjct: 21 HTDFILTLYQQTTSFEQLMMEHLRMSAVYWGLAGLATMGKDNVEGINKPELVEWVLSCQHDGGGFGGNTDQDPHMLYTLSAVQILALCGALDQVDGDKVAGYIASLQQPDGSFWGDKWGEVDTRFSYCALSCLALLGRLRTAEGVDVDAAAEFVGR--CRNFDGGYGCVPGAESHAGQVFTCVGALSIAHRLDLCDTELLGWWLSERQCDAGGLNGRPEKQADVCYSWWILSALSILGKVSWINTDRLRDFILKCQDREDXXXXXXXXXXXXXXXXXXXXXXXXXXGYFDGAAXXXXXXXXXXXXXXXXXRCPGHRVIDPVFALPADLVAALGLRAQTLPP 359
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A7S0STK9_9STRA (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STK9_9STRA) HSP 1 Score: 359 bits (921), Expect = 3.440e-116 Identity = 202/323 (62.54%), Postives = 245/323 (75.85%), Query Frame = 3
Query: 321 QGLHREYVLRISKETDSFEYCMTEHLRMSGVYWGLMSMALMGRDLQKEMGAEDLVKWVMRCQH-ENGGFGGNEGHDPHILYTLSALQVLALLGQLERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLDGGKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNGRDGYDSFVPVDAVYALPVPLVEQLGLKSQ 1286
+ +H EY+L+ISK+ SFEY +T+H RMSG+YWGL SM L+GRD+ EM +++ WV++CQ + GGFGG+ GHDPHILYTLSALQ+L+L +L +DKDK+A Y+S LQQ DGSF GD WGE+DTRFSYC LSS++ILGKL G I+ +KA +FV +PG+ESHAGQIF C+GALSI ++L VD LL WWLCERQCDSGGLNGRPEKQADVCYSWWILS L ILG++ WID +KL +IL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXYFN + Y +D YALP +V+ L L Q
Sbjct: 22 EDVHHEYILKISKDNQSFEYVITQHFRMSGIYWGLTSMCLLGRDIYTEMDGNNIINWVIQCQDPKTGGFGGSIGHDPHILYTLSALQILSLFNKLHIIDKDKIASYISSLQQIDGSFAGDCWGEIDTRFSYCALSSLSILGKLKDGTINFDKAVDFVXXXXXXXXX--XXAVPGSESHAGQIFCCIGALSICQALDRVDIDLLCWWLCERQCDSGGLNGRPEKQADVCYSWWILSCLSILGRISWIDSNKLIDYILQCQDKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNNKPHYRE---IDPTYALPKDIVQSLQLSHQ 339
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A7S2UYZ0_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYZ0_9STRA) HSP 1 Score: 351 bits (901), Expect = 1.350e-112 Identity = 207/319 (64.89%), Postives = 237/319 (74.29%), Query Frame = 3
Query: 372 FEYCMTEHLRMSGVYWGLMSMALMGRDLQKE-MGAEDLVKWVMRCQHENGGFGGNEGHDPHILYTLSALQVLALLGQLERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKL-------------DGGK---IDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNGRDGYDSFVPVDAVYALPVPLVEQLGL 1277
FE M EHLRMS VYWGL ++ +MG + E MG E LV+WV+ CQH NGGFGG+E DPH+LYTLSALQ+L + L+RVD ++V YV+GLQQ DGSF GDEWGEVDTRFSYC L +A+LG+L DG +DV AAEFV R C NFDGGFGC+PGAESHAGQIF CVGAL+I L LV LLGWWL ERQCDSGGLNGRPEKQADVCYSWWILSAL IL KV+WI+ L FIL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXX YF+G+ Y SF ++ +YALP LV++L L
Sbjct: 60 FEQLMMEHLRMSAVYWGLTAVCIMGHEEWTEVMGKEKLVQWVLTCQHSNGGFGGSEDQDPHLLYTLSALQLLGICDALDRVDSNQVYSYVAGLQQVDGSFVGDEWGEVDTRFSYCALYCLALLGRLSDISEESLEKIQPDGSGQRVVDVAAAAEFVAR--CTNFDGGFGCLPGAESHAGQIFCCVGALAIVNRLDLVSSDLLGWWLSERQCDSGGLNGRPEKQADVCYSWWILSALSILKKVNWINCDGLISFILKCQDLXXXXXXXXXXXXXXXXXXXXXXXXXXLLGYFDGKSEYSSFKKINPIYALPDDLVQKLRL 376
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A6U3TTQ5_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TTQ5_9STRA) HSP 1 Score: 336 bits (862), Expect = 2.140e-106 Identity = 207/355 (58.31%), Postives = 252/355 (70.99%), Query Frame = 3
Query: 324 GLHREYVLRISKETD---SFEYCMTEHLRMSGVYWGLMSMAL----------MGRDLQKEMGAED----LVKWVMRC-QHENGGFGGNEGHDPHILYTLSALQVLALLGQL--ERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLDG-----GKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFN-----GRDGYDS---FVPVDAVYALPVPLVEQLGLKSQV 1289
LH+ Y+ ++ + D S+E + EHLRMSGVYW + +++L MG +D +V WV C ++GGFGGN GHD H+LYTLSALQ+LA+ +L ER++ +KV+ +++ LQQ DGSF GD WGE+DTRFSYC LS++AIL KL G +DV+KAAE+V +C+NFDGGFGC+PGAESHAGQIF CVGALSIA+SLHL+D LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL ILGKV WI KL GFIL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXX Y N G + + + +D VYALP +VE+LGL Q+
Sbjct: 22 NLHKTYITSLASKIDKPTSYEGAVMEHLRMSGVYWSITALSLIRSPQEVDELMGLTTTPTTSQDDKRPSIVDWVFACYDKDSGGFGGNIGHDGHLLYTLSALQILAIANKLDDERLNVEKVSQFIAQLQQPDGSFAGDGWGEIDTRFSYCALSALAILQKLPSPEETDGIVDVKKAAEYVA--SCKNFDGGFGCVPGAESHAGQIFCCVGALSIAQSLHLLDADLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSILGKVPWISTDKLGGFILQCQDEEDXXXXXXXXXXXXXXXXXXXXXXXXXXGYLNRVRIDGEEDEEERRVYRKIDPVYALPTDVVERLGLSGQI 374
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A7R9WA00_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WA00_9STRA) HSP 1 Score: 332 bits (851), Expect = 1.420e-104 Identity = 213/359 (59.33%), Postives = 255/359 (71.03%), Query Frame = 3
Query: 327 LHREYVLRISKETDS---FEYCMTEHLRMSGVYWGLMSMALMG--RDLQKEMG---------AED-------LVKWVMRCQHE-NGGFGGNEGHDPHILYTLSALQVLALLGQLE--RVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLD-----GGKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNGRDGYDS---------FVPVDAVYALPVPLVEQLGLKSQV 1289
LH +Y+ ++ + DS +E +TEHLRMSGVYW + +++L+ ++ K MG AE +V WV C GGFGGN GHD H+LYTLSALQ+LA+ L+ R+D++ V +VS LQQ DGSF GDEWGEVDTRFSYC LS+++ILG L GG IDV KAA++V +CRNFDGGFGC+PGAESHAGQIF CVGALSIA+SL L+D LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL I+G+V WI KL FIL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXY + +S + +D VYALP V++LGLK+QV
Sbjct: 34 LHVKYISTLATKLDSPTSYEGAVTEHLRMSGVYWSITALSLLRSPEEVDKMMGLTSQIRSNGAESSAKQRPSIVDWVFSCYDSLTGGFGGNVGHDGHLLYTLSALQILAIADMLDDPRLDREAVVKFVSELQQPDGSFAGDEWGEVDTRFSYCALSALSILGSLPERGEKGGVIDVRKAAQYVA--SCRNFDGGFGCVPGAESHAGQIFCCVGALSIAKSLDLMDVDLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSIMGRVPWISTVKLGEFILKCQDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLHDVGSTESDEEKSRKECYRKIDPVYALPTDTVQKLGLKAQV 390
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: A0A7S2JWC8_9STRA (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWC8_9STRA) HSP 1 Score: 315 bits (806), Expect = 2.560e-99 Identity = 163/290 (56.21%), Postives = 203/290 (70.00%), Query Frame = 3
Query: 324 GLHREYVLRISKETD---SFEYCMTEHLRMSGVYWGLMSMALMGRDLQKE--MG--------AED--------LVKWVMRCQHEN-GGFGGNEGHDPHILYTLSALQVLALLGQLE--RVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILG-----------KLDGGKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILR 1088
LH Y+ ++ + D S+E +TEHLRMSGVYW + +++++ + Q + MG AED ++ WV C EN GGFGGN GHD H+LYTLSA+Q+LA+ +L+ R+DK K+ Y++ LQQSDGSF GD WGE+DTRFSYC LS+++ILG K +G IDV+ AA +V +CRNFDGGFGC+PGAESHAGQIF CVGALSIA +L L+D LL WWLCERQCDSGGLNGRPEKQADVCYSWWILSAL ILG+V WI KL FI++
Sbjct: 30 SLHTAYIASLATKLDAKDSYEGAVTEHLRMSGVYWSIAAISIIRTEDQVDDLMGLTKAISPEAEDEVSVSRPAIIDWVFLCYDENVGGFGGNIGHDAHLLYTLSAIQILAMANKLDDPRLDKAKIGQYIASLQQSDGSFAGDMWGEIDTRFSYCALSALSILGLLKRRCNDGTSKAEGELIDVDGAAAYVA--SCRNFDGGFGCVPGAESHAGQIFCCVGALSIAGALDLLDSDLLCWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGRVSWISRDKLADFIVK 317
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: B8C277_THAPS (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C277_THAPS) HSP 1 Score: 316 bits (809), Expect = 1.040e-98 Identity = 202/353 (57.22%), Postives = 252/353 (71.39%), Query Frame = 3
Query: 324 GLHREYVLRISKETD---SFEYCMTEHLRMSGVYWGLMSMALMGRDLQKEMGAEDLVKWVMRC-QHENGGFGGNEG--------HDPHILYTLSALQVLALLGQL--ERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKLDGGK---IDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEG-----------LLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFN---GRDGYDSFVPVDAVYALPVPLVEQLGLKSQV 1289
LH Y+ + + D S+E +TEHLR+SGVYW L +++L+ RD +E+ +V WV C GGFGGN HD H+LYTLSALQ+LA+ + ER++K+ + +V+GLQ DGSF GDEWGEVDTRFSYC LS +A+LGKL K ID+ KA +++ +CRNFDGGFG +PGAESHAGQ+F C+GALSIA SLHL+++G LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL I+G+V+WI+ SKL FIL CQD XXXXXXXXXXXXXXXXXXXXXXXXXXXX+ R+G + VD V+ALP+ +V++LGL++QV
Sbjct: 17 ALHANYIAALGDKLDNPSSYEGAVTEHLRVSGVYWSLAALSLL-RD-SEEVDQSAIVDWVFACYDSRTGGFGGNCSGGVDAPCPHDGHLLYTLSALQILAMADCMDDERLNKEAIVKFVAGLQNEDGSFSGDEWGEVDTRFSYCALSCLALLGKLPDNKRPIIDIYKAVQYI--ISCRNFDGGFGSVPGAESHAGQVFCCIGALSIAHSLHLLNDGIDKSSSSGGADLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSIMGRVNWINTSKLGQFILHCQDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGKIGNREG-KLYREVDPVFALPLDVVKKLGLRAQV 364
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Match: F6U1E2_CIOIN (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6U1E2_CIOIN) HSP 1 Score: 312 bits (800), Expect = 3.780e-98 Identity = 144/257 (56.03%), Postives = 190/257 (73.93%), Query Frame = 3
Query: 330 HREYVLRISKETDSFEYCMTEHLRMSGVYWGLMSMALMGRDLQKEMGAEDLVKWVMRCQHENGGFGGNEGHDPHILYTLSALQVLALLGQLERVDKDKVAGYVSGLQQSDGSFFGDEWGEVDTRFSYCGLSSMAILGKL-DGGKIDVEKAAEFVGRRACRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALKILGKVDWIDGSKLQGFILRCQD 1097
H EY+ + +EYCMTE+LR+SG+YWGL ++ LM + M ++V++V+ CQ E GGFG HDP ILYTLSA+QVL +L +L+++ DK +++GLQ DGSF GD+WGEVDTRFS+C +++++++G+L I++EK EF+ +C NFDGGFGC PG+ESH+GQI+ CVG LSI R LH +D+GLLGWWLCERQ SGGLNGRPEK DVCYSWW+LS+L ILGK+ WID KL+ FIL QD
Sbjct: 23 HIEYIAAYGANKEDYEYCMTEYLRLSGIYWGLTAVDLMHS--RNRMNENEIVEFVVSCQKECGGFGPAPAHDPSILYTLSAVQVLCMLDKLDKIHIDKAVAFIAGLQNKDGSFSGDKWGEVDTRFSFCAVAALSLVGRLWSDCPINIEKCVEFI--LSCMNFDGGFGCRPGSESHSGQIYCCVGVLSILRELHHIDDGLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLSSLAILGKLHWIDKHKLKMFILASQD 275 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14399.3023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14399.3023.1 >prot_H-elongata_contig14399.3023.1 ID=prot_H-elongata_contig14399.3023.1|Name=mRNA_H-elongata_contig14399.3023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=314bp MTEHLRMSGVYWGLMSMALMGRDLQKEMGAEDLVKWVMRCQHENGGFGGNback to top mRNA from alignment at H-elongata_contig14399:748..4970+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14399.3023.1 ID=mRNA_H-elongata_contig14399.3023.1|Name=mRNA_H-elongata_contig14399.3023.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4223bp|location=Sequence derived from alignment at H-elongata_contig14399:748..4970+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14399:748..4970+ >mRNA_H-elongata_contig14399.3023.1 ID=mRNA_H-elongata_contig14399.3023.1|Name=mRNA_H-elongata_contig14399.3023.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1884bp|location=Sequence derived from alignment at H-elongata_contig14399:748..4970+ (Himanthalia elongata Himel1 dioecious)back to top |