mRNA_H-elongata_contig14317.2980.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14317.2980.1
Unique NamemRNA_H-elongata_contig14317.2980.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A6H5KXE1_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXE1_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 4.360e-149
Identity = 238/333 (71.47%), Postives = 276/333 (82.88%), Query Frame = 1 
Query:    4 VAGGTGASLYG--HVQKKGETEVALCEATSIPTHGLKEVAQRLGPYVMNMDQEENIAVRTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAKHAQHAVHRRENEDG-SGRSPIAGAWASREDLLEAKKLLEKQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL 993
            VAGG  A +    ++ K  + + ALC+A + P  G+K VAQRLG YV N++  + I +R  +LGVKVY VV+++AH AAGGLPVVR AQ LIKAP++D+A  WWQAG+RKEWDSVNT DSQLVRSL  DARLVY+QGKPKRGG++SSRDFCYV ++AP EL+GAKPGS LFVQANAA EVP NNASTRGDVNS+LLL PVDPITT+A+YAIE+DVKGWLP+KVVKAAADE PLTLAVLRDHIEKEL EEASL  +AAAKHA   VHRRE+ +G SG   IAGAWA+REDLLE KKLLEKQLKK SA+ERK GIDLS LR HIKEEIA++DRRL
Sbjct:   17 VAGGASACMLRNTYLDKSEQEQGALCQAPNAPQSGMKGVAQRLGAYVQNIEDPDKITLRANKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVDDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPLNNASTRGDVNSVLLLVPVDPITTRAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHA---VHRREDSEGKSGGESIAGAWATREDLLETKKLLEKQLKKVSADERKMGIDLSELRKHIKEEIAEVDRRL 346
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BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: D8LQJ8_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ8_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.070e-114
Identity = 178/246 (72.36%), Postives = 209/246 (84.96%), Query Frame = 1 
Query:   37 HVQKKGETEVALCEATSIPTHGLKEVAQRLGPYVMNMDQEENIAVRTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAK 774
            ++ K    + ALC+A + P  G+K VAQRLG YV N++  + I +R ++LGVKVY VV+++AH AAGGLPVVR AQ LIKAP+ED+A  WWQAG+RKEWDSVNT DSQLVRSL  DARLVY+QGKPKRGG++SSRDFCYV ++AP EL+GAKPGS LFVQANAA EVP NNASTRGDVNS+LLL PVDPITT+A+YAIE+DVKGWLP+KVVKAAADE PLTLAVLRDHIEKEL +EASL  +AAAK
Sbjct:    6 YLDKSERDQGALCQAPNAPQSGMKGVAQRLGAYVQNIEDSDKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPVDPITTRAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSDEASLSPEAAAK 251
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BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A835YTY3_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY3_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.450e-80
Identity = 134/224 (59.82%), Postives = 167/224 (74.55%), Query Frame = 1 
Query:   70 LCEATSIPTHGLKEVAQRLGPYVMNMDQEENIAVRTERL---GVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKE 732
            L  A   P   +K V  RLG  V+++   E   V T R    GV +Y V NE+AH+ AGGLPVVR A+ +IKAP+ ++A  WW    RK+WDSVNT+D QLV++L +D RLVYLQGKPKRGG++SSRDF YVM+R P + +GA+ GS LF+Q N A EVP N++S RGDVNSLLLLEP+D  TT+A YAIE+DVKGWLP KVV AAADETPLTLAV+RDH+E++
Sbjct:   35 LAAACDAPGASVKSVTARLGRLVVDVPTLEATKVLTRRTDLNGVTIYSVTNEAAHSKAGGLPVVRVAEAVIKAPVAEVAALWWHVQSRKDWDSVNTQDCQLVKALGTDERLVYLQGKPKRGGVISSRDFAYVMHRVPAQELGARTGSALFIQTNTASEVPANSSSVRGDVNSLLLLEPLDATTTRARYAIEIDVKGWLPTKVVNAAADETPLTLAVMRDHLERQ 258
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BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A4D9DBA7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBA7_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.140e-48
Identity = 115/296 (38.85%), Postives = 170/296 (57.43%), Query Frame = 1 
Query:  121 RLGPYVMNMDQEENIAVRTERLGVKVYGVVNESAHAAA-----GGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAKHAQHAVHRRENEDGSGRSPIAGAWASREDLLEAKKLLEKQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL 993
            R+  Y      EE    + E+ GVK+Y V   S    A      GLPV R  + +I AP+E +AT WW    R  WD VNT  S++V     +ARLVY++G PK   ++SSRDF +V ++ P   +G   G+  FVQ NAA  +P N+ + RG++NS++LLEPVD  TT+  Y  E++ KGWLP   V+AAAD+ P  L V++ H+E E  E      DA A   + A  R +  D +    +    ASREDLL  KKLL+ +L++A  +E+K  + L+ L++ I+ ++ +++ RL
Sbjct:  115 RMQKYFTTASLEEVAKFKKEKAGVKIYTVKEGSIPDPAIGGRKTGLPVARIGEAVINAPLEQVATLWWVFNGRILWDKVNTLASEVVEEY-KNARLVYIKGTPKP--MISSRDFVFVSHKVPAGDLGGSFGAQAFVQTNAANSLPENSGAVRGNINSIILLEPVDGYTTRVRYVCEIEPKGWLPTMAVEAAADDLPGVLGVMKAHLESEATE------DAEALVRRRASLREK--DHTHPLLVDSVTASREDLLALKKLLQTKLEEAKRDEKKLNLSLAELKSKIQNDLKKVEARL 399
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BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: W7TWL2_9STRA (Lipid-binding START n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.180e-30
Identity = 74/189 (39.15%), Postives = 116/189 (61.38%), Query Frame = 1 
Query:  427 IVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAKHAQHAVHRRENEDGSGRSPIAGAWASREDLLEAKKLLEKQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL 993
            ++SSRDF +V ++ P   +G   G+  FVQ NAA  +P N+ + RG++NS++LLEPVD  TT+  Y  E++ KGWLP   V+AAAD+ P  L V++ H+E E  E      DA A   + A  R +  D +    +    ASREDLL  KKLL+ +L++A  +E+K  + L+ L++ I+ ++ +++ RL
Sbjct:    1 MISSRDFVFVSHKVPAGDLGGSFGAQAFVQTNAANTLPENSGAVRGNINSIILLEPVDGYTTRVRYVCEIEPKGWLPTMAVEAAADDLPGVLGVMKAHLESEATE------DAEALVRRRASLREK--DHTHPLLVDSVTASREDLLALKKLLQTKLEEAKRDEKKLNLSLAELKSKIQNDLKKVEARL 181
[Close]
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: D8LQJ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 8.110e-12
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = -3 
Query: 1747 CLAKIRSKSRQTRPGLISYKCTILQAPKAGDGKADIQVDFIYADLIKQQGWVSEATLLYVHTNLSAKDLRELRRKASGMKVGQVTPS 2007
            CL  +R+ +R   P L  ++    + PK    KA+I+VDFI AD +KQ+GWV+EATLL+VHTN SAKD+ E++ KA GMK+G +  S
Sbjct:  345 CLEDLRAAAR---PTLERWRKE--EVPKLHSVKANIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDIIEIKTKADGMKIGAIALS 426
[Close]
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A6H5KZ72_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ72_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.380e-10
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = -3 
Query: 1690 KAGDGKADIQVDFIYADLIKQQGWVSEATLLYVHTNLSAKDLRELRRKASGMKVGQVTPS--ACRIIICG*ARSAVKKRAA 1926
            K    KA I+VDFI AD + Q+GWV+EATLL+VHTN SAKD+ E++ KA GMKV  V  S  +C  I+C  A   +++R++
Sbjct:  357 KLNSVKAKIRVDFINADAMNQKGWVAEATLLFVHTNFSAKDIIEIKTKADGMKVRTVKKSTGSCPAILC--AERTLRRRSS 435
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KXE1_9PHAE4.360e-14971.47START domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LQJ8_ECTSI1.070e-11472.36START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YTY3_9STRA2.450e-8059.82START domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9DBA7_9STRA1.140e-4838.85START domain-containing protein n=2 Tax=Monodopsid... [more]
W7TWL2_9STRA2.180e-3039.15Lipid-binding START n=1 Tax=Nannochloropsis gadita... [more]
D8LQJ9_ECTSI8.110e-1249.43DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KZ72_9PHAE1.380e-1050.62DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14317contigH-elongata_contig14317:2..6556 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSTART-like domain
Ec32 orthologEc-10_005970.1
Exons10
Model size3248
Cds size858
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14317.2980.1prot_H-elongata_contig14317.2980.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14317 2254..6121 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929849.6377442-UTR-H-elongata_contig14317:1..22531622929849.6377442-UTR-H-elongata_contig14317:1..2253Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14317 2..2253 -
1691679182.4393404-UTR-H-elongata_contig14317:1..22531691679182.4393404-UTR-H-elongata_contig14317:1..2253Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14317 2..2253 -
1622929849.8011935-UTR-H-elongata_contig14317:6121..61511622929849.8011935-UTR-H-elongata_contig14317:6121..6151Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14317 6122..6151 -
1691679182.5334563-UTR-H-elongata_contig14317:6121..61511691679182.5334563-UTR-H-elongata_contig14317:6121..6151Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14317 6122..6151 -
1622929849.8133988-UTR-H-elongata_contig14317:6448..65561622929849.8133988-UTR-H-elongata_contig14317:6448..6556Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14317 6449..6556 -
1691679182.5497415-UTR-H-elongata_contig14317:6448..65561691679182.5497415-UTR-H-elongata_contig14317:6448..6556Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14317 6449..6556 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929849.6537375-CDS-H-elongata_contig14317:2253..23701622929849.6537375-CDS-H-elongata_contig14317:2253..2370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 2254..2370 -
1691679182.4501324-CDS-H-elongata_contig14317:2253..23701691679182.4501324-CDS-H-elongata_contig14317:2253..2370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 2254..2370 -
1622929849.6716201-CDS-H-elongata_contig14317:2731..28361622929849.6716201-CDS-H-elongata_contig14317:2731..2836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 2732..2836 -
1691679182.4648166-CDS-H-elongata_contig14317:2731..28361691679182.4648166-CDS-H-elongata_contig14317:2731..2836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 2732..2836 -
1622929849.687156-CDS-H-elongata_contig14317:3971..40821622929849.687156-CDS-H-elongata_contig14317:3971..4082Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 3972..4082 -
1691679182.4740884-CDS-H-elongata_contig14317:3971..40821691679182.4740884-CDS-H-elongata_contig14317:3971..4082Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 3972..4082 -
1622929849.7039068-CDS-H-elongata_contig14317:4354..44021622929849.7039068-CDS-H-elongata_contig14317:4354..4402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 4355..4402 -
1691679182.4814112-CDS-H-elongata_contig14317:4354..44021691679182.4814112-CDS-H-elongata_contig14317:4354..4402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 4355..4402 -
1622929849.722586-CDS-H-elongata_contig14317:4577..46761622929849.722586-CDS-H-elongata_contig14317:4577..4676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 4578..4676 -
1691679182.4886868-CDS-H-elongata_contig14317:4577..46761691679182.4886868-CDS-H-elongata_contig14317:4577..4676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 4578..4676 -
1622929849.74319-CDS-H-elongata_contig14317:4914..49661622929849.74319-CDS-H-elongata_contig14317:4914..4966Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 4915..4966 -
1691679182.4968069-CDS-H-elongata_contig14317:4914..49661691679182.4968069-CDS-H-elongata_contig14317:4914..4966Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 4915..4966 -
1622929849.7620232-CDS-H-elongata_contig14317:5303..54401622929849.7620232-CDS-H-elongata_contig14317:5303..5440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 5304..5440 -
1691679182.5065703-CDS-H-elongata_contig14317:5303..54401691679182.5065703-CDS-H-elongata_contig14317:5303..5440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 5304..5440 -
1622929849.7731254-CDS-H-elongata_contig14317:5628..57601622929849.7731254-CDS-H-elongata_contig14317:5628..5760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 5629..5760 -
1691679182.514938-CDS-H-elongata_contig14317:5628..57601691679182.514938-CDS-H-elongata_contig14317:5628..5760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 5629..5760 -
1622929849.7833047-CDS-H-elongata_contig14317:6064..61211622929849.7833047-CDS-H-elongata_contig14317:6064..6121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 6065..6121 -
1691679182.5241146-CDS-H-elongata_contig14317:6064..61211691679182.5241146-CDS-H-elongata_contig14317:6064..6121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14317 6065..6121 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14317.2980.1

>prot_H-elongata_contig14317.2980.1 ID=prot_H-elongata_contig14317.2980.1|Name=mRNA_H-elongata_contig14317.2980.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MNMDQEENIAVRTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIE
DIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSS
RDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLL
EPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELM
EEASLGADAAAKHAQHAVHRRENEDGSGRSPIAGAWASREDLLEAKKLLE
KQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL*
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mRNA from alignment at H-elongata_contig14317:2..6556-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14317.2980.1 ID=mRNA_H-elongata_contig14317.2980.1|Name=mRNA_H-elongata_contig14317.2980.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6555bp|location=Sequence derived from alignment at H-elongata_contig14317:2..6556- (Himanthalia elongata Himel1 dioecious)
GTTGTGGCTGGTGGAACAGGTGCTTCTCTGTATGGACATGTCCAGAAAAA
AGGAGAAACGGAGGTGGCTCTCTGCGAGGCTACGAGCATTCCCACTCATG
GACTGAAGGTAATCGTGGTCGGGAAATATGTTCACCATTGTTATCTGCGT
TAGAGGAAAAAACCAGCATTATGCGCGCTGGTTTGACCTCTCGTAGAACT
CTTCCGTGAAGCAATGACACCTTGGTCTGCGCAAAAGCTGAGACGGTGAT
TTTGATTGGTCAGTCGTTTAGTAGAGCCTTCGAGGGACTGTGATGCGGAG
GTAGGGTGGGGGAAACTGTTCGCGTTAAAAATGATGTACCCTGTATGCTG
CACAACAACCGCGCGGGGAACACGAACGTGATGACGTCATGATGTTTCCG
ACCAGGAAGTAGCCCAACGTCTCGGGCCGTACGTCATGAACATGGATCAA
GAGGAAAATATTGCTGTCCGCACGGAAAGGCTTGGCGTCAAGGTAACGTG
TCTCTGTGTAGCGATGTGTGTTCTAGGTTGTTGACAACAGGATCACTCAA
AGTCTCACCTGTGCAAGGAACGTCTTGTCAAGGGGAGAATTCGGTCGAGT
GGGTACGTAAAATTACCTCATTGGTCGCCGGCCGAAGCAGACGCTGCGCC
TTGCGCACATTCAGTTTGAGGGGTCCAACAGGGGTGTAGAGGTCGTTGAC
CCGCAGGCGTGTCGTAGGCGCGAACGGCACGACCTTAGCCGGCGATCTTG
GCGCCGATGCCTCCGTTTCCGCATCTTATCTCGCTCGGTGGCCCAGGTGT
ACGGGGTCGTCAACGAGAGCGCACATGCCGCCGCCGGGGGTCTTCCCGTT
GTTCGCGCGGCGCAGACGTTGATCAAAGCCCCCATCGAGGATATTGCCAC
GTCTTGGTGGCAGGCGGGGAAGCGAAAGGTGAGTGTCGATACGAACCCGG
GCTACCTACGGGGTATCTAGGTCTTCCGCTTAGCGTCCTCGTCGACCGTT
GGCAGACGGTGCGATGTCACTTGTATCGAATGTGTGGCGTTCGTGCGGAA
TCTTTCTGGAGTGGTTCAAGAGGACTTGGGTGACTTTCGTGATAAACAAA
AAAAAACACTTGACAGGAATGGGACTCCGTCAACACAAAGGATTCCCAGC
TCGTGCGATCGTTGACTTCCGACGCGAGGCTGGTGTACCTCCAGGGCAAG
CCCAAGAGGGGCGGCATCGTTTCTTCGCGCGACTTTTGCTACGTGATGTA
CCGGTGAGATAGATGCAAGCCAGGTGCTCTCTGTACAGTGGAAACGGCCG
AGGGTTCCGTTGCCTTGGAGGTGATCGATTTGTGTTAGTATTTCCCCCCT
TCGCCCGCCGCTCCGTTCCCGAACGTTCCCGCAGAGTCTGTAGAAGGGCG
AGTCCCTACTGAGGCGCTAAGGGCAATATCGAGAAAGCCGATAAAAACGC
GCTCTTTGCGTTTCCCGCTGCGATGCCGTCGCAAAGATCACATAAATCGG
CGAAGCCCGTATCCGGTTCAATGTTTCCCCCCTCCCGGCGTCTTTGATGC
CCCCCCGGCGTCTCTACATGCCTCACCACCTTCCGCGCAGGGCGCCCCCT
GAGCTCATCGGGGCGAAGCCAGGAAGCGTCCTCTTCGTACAGGTACCGAT
ATTTGTAGACACGGGACGAGCCTTGGCGTCACTTTTCCATAGAATAAGAA
GCCCGTAAGGCGCACTAACTGAGTCAGGACCGCAGCGTCAGATTCACGAA
TTGAGATGGGACAAGGGGAGAGGCGGACGGAACCGATACCGGCAATTGAT
CGATCTTCAGGTGATGTATCTTCATCTCCGCCAGTGAAATACTAGCTATT
GCGTGCTCTCTGTGTTCCGTTCTGTTGCAGGCCAATGCAGCTATGGAGGT
GCCCCGTAACAACGCCAGCACTCGTGGGGACGTGAACTCGCTCCTGCTGC
TGGAGCCTGTCGACCCCATAACGACAAAGGTGCGGAACGGTGCTGGAACT
ACTCGGCCGGTGTCATTCTTGCGAAGGTTGCCAGCAGCTTCTCGAGACGG
AATGTTGTGCGAGAAACAAACTCACCCCCGAAACGTTCTGTTCGGTCTCT
CCACTGGTGGCCTCTCTTTCCTTCCTTCTCACCGCGTTTGTTTTCCGTTC
GCAGGCGTTTTACGCGATCGAGGTGGACGTGAAGGGATGGCTGCCAATCA
AGGTGCGCGGCGACGATCCGTTGCTGATCTCGATCGCTTGATGGTATATC
TTCGTCAGAGTTAGCTGTTTTTAGTTCGATGCGAGACTCTTGGGCGTCAT
ATGTGCCGACGCGTTGGGCTGCAGCTGTGTCCAAGGGGTACGCGGTGGTT
GGCTTGGGTGTGAGAGACAGGGTGATTTGGTGGTGTTCGCCCACACCACA
CTCTCTCTCGCGACTGTTTTTTCCTCTATCTCTCTCTCTCTCTCCCTCCC
TCCCTCCCTCCCTATCTCTTTCAGGTTGTGAAGGCTGCGGCCGACGAAAC
TCCGCTGACGCTGGCTGTGCTTCGCGATCACATCGAGAAAGAGCTGATGG
AAGAGGCTTCCCTCGGAGCCGATGCAGCCGCCAAGGTATGCTTCAAACCT
TTGCCAAGGGACATGATTCCAAGTTAGACTTTTTGCCAGGGTACAAGTAA
GTATATTATTCGATTTCGTTGGGGGGGGGTGCCAAGGTCTGACTCGAAGT
CTTGGCTTTTTGGAAGATGAGCCACGAAAGCTTTCGCTGGCACAGGCAAC
CCGCACTCTCGAAGATAAGGGCGTATGCGCTCTTGGCCCCAGCAAACGCT
GGATCCTCCAGTATAGCCGAGTAAAGCAGATCGTCGAAGTTATTTTTCCG
AATGTCTAACGTAAATTATGGGGTTTGTTTTTGTTTTCGTTTTTGGATGC
TGAAAATACAAGCGTCGAGAAGGGGGTAATATATAGAGTTTTAACCTGGC
CGCGGTTTTCGTTTTTTGGATGCTGTCAAAATAAGTGTCGAAAAGGAAAT
CATATCGAGAGTTCAAACCTGGCCGCCATCTCTGGAGATAAATTCTTATA
CAAATTTGGAGATCAAGAATACGGCGGCGTGCAAAAAACGGTTTAGATTG
AGTCCTCGCCGATGTGGGGTATAGACGGCTCGGCCATAACCTCTTTCCAC
CGATAGAGCTACGGCGGTCCTTTTCGAGACATGAATCAGAAACAAGTCAT
CGGTGCGTTTTGCACGTTTGTTTCCGAAATTCGCTTGAATGCGGCGCGTT
AAAGAAACCAATGTTTCGTGACGAGGGCAGACAAATTGCGGTCGGACTGC
TAGTTGAAAGCGGCAGCGTCCGAACTTTCGTGGTGGTATTCTTCGTGTAG
AAGCGGGGACAATGGGTAATGGGTAAAGGTCGTGGAGGCAAGAGAGCCGT
TGCCTGACATGTGCGCCGATTTGCTGTCAGATTCAAGAGTCTCTGCTACC
GCCGCCATCGGGATGTTAATTCATTCAAATACCCACGACTCGATCCCTGC
CGGGATCCGCTTCCGCTCCTCAAGCCTCACTCGATGCTTCAGGCTTGATG
GGCCTGACTTAATCAGGCATTCCTACTCCCCTGACTGCTGAAATATGTTC
CCCCCCGTTGCCTCTACGGAGCACGACTCAAAACAAAACCTGTCGCCCGA
GGAAATATCGCTTGACTCGGAGCGTCGAGTGCCGTCGTACGCTGTCCCCT
GCAACCTCTGTTTTCTTGAGCACGCTCAGCACGCCGTTCATCGAAGAGAG
AACGAGGACGGGTCAGGAAGGAGCCCTATCGCCGGGGCGTGGGCTTCTCG
GGAGGATTTATTGGAGGCCAAGAAGGTCAATAAAAATACCTATAATGTCG
TTGCGGTTAGGTTAACGCTCCAGGCTCGGGGGTTCTTCCGCATCGAGGTG
TTTGGCATTTCTTTTTATAAGTCGGTGCTTCTATTTCGTCGAAGCGTGTT
TTCGAGTGCCGCGAGAGGTTTTTCTCGTTTCGACCCCTGAGCATGCTTTT
CACGGGGGTCCCTCGTAGTTTTGTCGCAAAGAGCTTTAAGAGATTCGATC
ACGGGCGTTATCTGCCGGCGCATGGAAGTCGCGTCCTCCGTGTCGCTTTA
ATTTATGTTTTCGCTCCCCCCTGCGATCGCCTTTTGACCCTCCCGCTCGC
CCGCAATCGCCTGTTGGACGTTCCGCGTATCGGTAGCTGTTGGAAAAGCA
GCTGAAGAAGGCCTCGGCCGAGGAACGCAAGACGGGGATAGACCTTTCCG
GATTGCGTGCACATATAAAGGAGGAAATCGCTCAAATCGACAGACGGCTA
TAAAAACGGCCAAGACGAGCGGCTCTTCTTGCCGTGTGTTTTCATCTGTT
TCCCGTTCGGGAGAGAATATAAAGTTGTAACATATTTGGACCGACGTTGT
CAGTAGTTCCCGTTCGGCAGGCAAGGCGAGTGCGGGCCCTCGTCAGGAAC
AATGAGTGATTGATTTGTCGCAGTGCTTCAGGGTTGCTAGGCGTAGGTTT
TGATATATGCCGCAGCGGCACGAATCTAGCATATGTCAGCACAGTTTCCT
CCTGCCGCCGGGGTCGGGTGTTGTGCGCTAAGGAGATAATTTCTCGTGTA
TATAGAGCTTGGCAGCCCCCCATGACATGTTGACGGTTTCCACCGCCAGT
AACCCCCACTTGTCATCGTCTACGGCGGCGAGCGACACCGAGAGGCAAAT
CGCACCAAGCTGTCGGGTCACACGATGACGCGTAGATAGCAGCAGATACA
TACGTCGGAAGGCGAGCGGTGCGTTGATCGGTTGCTTTAGCATGGTCCGT
GGCGTGGGACACATCACGTATATTTTAATAGCGAATCCAAACAAGTCTTC
CGAGCGAATTACTAGAGGAGCGAAGTACACATGCTCCCTCCGCTCCCGTC
CTCAGCTCAGCTCAATAACGTTTGGAAAGCCTCATCAAGCATGGAGCGCT
ATGGTCCAGCCCCAACACGACGGTTGTCCCACGCCTTGCGCGTCGTCGCT
GCGCGTTTTTTTACGGCGGAACGCGCCTAACCACAAATAATGATGCGGCA
GGCAGACGGCGTGACTTGGCCTACCTTCATCCCGCTTGCCTTCCGTCGCA
GTTCGCGCAAGTCCTTGGCCGATAAATTCGTATGGACGTAGAGGAGGGTT
GCTTCCGACACCCACCCTTGTTGCTTTATTAAGTCTGCGTAGATGAAGTC
TACCTGTATATCGGCTTTGCCATCTCCGGCCTTGGGTGCCTGCAGTATAG
TGCATTTGTACGAAATCAAGCCTGGTCGTGTTTGTCGTGATTTACTACGG
ATTTTAGCCAAACACGAGCGAAGCGTAGAGCGCGGAGCTACACGCAACAA
CGAGTGCACCTATATACCGTGTATTTTTTAATGACTGGTGTCTCCCACCA
GATCTACCGTGTGCGTAAAACGTATTGGCTGGGCAGGGCATTTCTTATGA
AAGGTGTTTACTCGTCTTCACCTCTTCTTTTCGCCATCGATCCAGGATTG
GTCTCGATGCGTTGCGCAAGTCCGGTAACACCTCCACTCCGTAGCACGAC
TGGATGACGGATGCGACTCGTGCGCGGTGCCAAAGGAACGCGCAGCAGAC
GGGCGACACGAAGGCTATGTTGATGTTACGAGGTGAAGGGCTAACTGGTA
ATTGAGCTCATATCGTGGACCATATCCTGCAGGGTGAGGGTGTGTGATAA
AATATGTTACAAGCGCGATGAGGTGCTACAAGCGTCGTGTGCAGGACGGT
CTGTGGGGGGAGGTAGGCACGTGCTCTCGCTGGGGGGAGTGGAAAGGCAG
CGCACCTCCATGACGCATCTGATCGAGACGCACCCCAGTACGAAGACGTC
GCCGAGATCGCCCTGGGATTGCTGCACGAGAAGGCGATTACTCTTCTTAG
ACTTTACGCAGGAGGAGACGAGAAAAAACACCTCTATGTTCTGGGGCGAG
GCCCAAGTAGCTTCGCCAACATGATGACCATCACCACGTAAGGCTCTGAC
CGCGTTATCAAGTGTTTCTACGATAACACCAACCCGAAACCTGCATGTAG
TATGGTAAGCCTTCCCCGCTATATCAAATTCACTATTTCGGTACGACGGG
CTACATGCGGAGGATACTCATGAGAGAGCGCAAGGTGGAGTCGCGTGGGG
TAAATGTTTAGTGATGGGCATTATCCCGAACCAATCGAACGATGATATCA
GGGTGTTCAATTCCCGCACTGACCGAGCTGTCACTTATCAGAACGTGTTG
AGGTGTGGCAGCCGAAAGCACCCGTGGTGAGCAGACAGCAAGACCAAGCT
GAGGCAATCTGGGGGAGGGGGGGGTACCTGCAAGGTGTCGCCCCTGATCG
ATTCACTTGTAGAACCGTTACATACGCGTAGGAGTTGACCTTGGTATACG
TTGGTTACATCACAGGAGAAAAGTTTAAATACTTCCCTGTCTGAGTATAT
TACTTATGTTGGGATGATCCAAACTCGGTGGGACAGGCGATGTGGGCCTT
GCAGAGTAGGTAGAGATATAGGATACAGACGTTTTATATATTATTCTCCG
TGAGG
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Coding sequence (CDS) from alignment at H-elongata_contig14317:2..6556-

>mRNA_H-elongata_contig14317.2980.1 ID=mRNA_H-elongata_contig14317.2980.1|Name=mRNA_H-elongata_contig14317.2980.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig14317:2..6556- (Himanthalia elongata Himel1 dioecious)
ATGAACATGGATCAAGAGGAAAATATTGCTGTCCGCACGGAAAGGCTTGG
CGTCAAGATGAACATGGATCAAGAGGAAAATATTGCTGTCCGCACGGAAA
GGCTTGGCGTCAAGGTGTACGGGGTCGTCAACGAGAGCGCACATGCCGCC
GCCGGGGGTCTTCCCGTTGTTCGCGCGGCGCAGACGTTGATCAAAGCCCC
CATCGAGGATATTGCCACGTCTTGGTGGCAGGCGGGGAAGCGAAAGGTGT
ACGGGGTCGTCAACGAGAGCGCACATGCCGCCGCCGGGGGTCTTCCCGTT
GTTCGCGCGGCGCAGACGTTGATCAAAGCCCCCATCGAGGATATTGCCAC
GTCTTGGTGGCAGGCGGGGAAGCGAAAGGAATGGGACTCCGTCAACACAA
AGGATTCCCAGCTCGTGCGATCGTTGACTTCCGACGCGAGGCTGGTGTAC
CTCCAGGGCAAGCCCAAGAGGGGCGGCATCGTTTCTTCGCGCGACTTTTG
CTACGTGATGTACCGGAATGGGACTCCGTCAACACAAAGGATTCCCAGCT
CGTGCGATCGTTGACTTCCGACGCGAGGCTGGTGTACCTCCAGGGCAAGC
CCAAGAGGGGCGGCATCGTTTCTTCGCGCGACTTTTGCTACGTGATGTAC
CGGGCGCCCCCTGAGCTCATCGGGGCGAAGCCAGGAAGCGTCCTCTTCGT
ACAGGGCGCCCCCTGAGCTCATCGGGGCGAAGCCAGGAAGCGTCCTCTTC
GTACAGGCCAATGCAGCTATGGAGGTGCCCCGTAACAACGCCAGCACTCG
TGGGGACGTGAACTCGCTCCTGCTGCTGGAGCCTGTCGACCCCATAACGA
CAAAGGCCAATGCAGCTATGGAGGTGCCCCGTAACAACGCCAGCACTCGT
GGGGACGTGAACTCGCTCCTGCTGCTGGAGCCTGTCGACCCCATAACGAC
AAAGGCGTTTTACGCGATCGAGGTGGACGTGAAGGGATGGCTGCCAATCA
AGGCGTTTTACGCGATCGAGGTGGACGTGAAGGGATGGCTGCCAATCAAG
GTTGTGAAGGCTGCGGCCGACGAAACTCCGCTGACGCTGGCTGTGCTTCG
CGATCACATCGAGAAAGAGCTGATGGAAGAGGCTTCCCTCGGAGCCGATG
CAGCCGCCAAGGTTGTGAAGGCTGCGGCCGACGAAACTCCGCTGACGCTG
GCTGTGCTTCGCGATCACATCGAGAAAGAGCTGATGGAAGAGGCTTCCCT
CGGAGCCGATGCAGCCGCCAAGCACGCTCAGCACGCCGTTCATCGAAGAG
AGAACGAGGACGGGTCAGGAAGGAGCCCTATCGCCGGGGCGTGGGCTTCT
CGGGAGGATTTATTGGAGGCCAAGAAGCACGCTCAGCACGCCGTTCATCG
AAGAGAGAACGAGGACGGGTCAGGAAGGAGCCCTATCGCCGGGGCGTGGG
CTTCTCGGGAGGATTTATTGGAGGCCAAGAAGCTGTTGGAAAAGCAGCTG
AAGAAGGCCTCGGCCGAGGAACGCAAGACGGGGATAGACCTTTCCGGATT
GCGTGCACATATAAAGGAGGAAATCGCTCAAATCGACAGACGGCTATAAC
TGTTGGAAAAGCAGCTGAAGAAGGCCTCGGCCGAGGAACGCAAGACGGGG
ATAGACCTTTCCGGATTGCGTGCACATATAAAGGAGGAAATCGCTCAAAT
CGACAGACGGCTATAA
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