mRNA_H-elongata_contig14281.2961.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 536 bits (1382), Expect = 3.620e-169 Identity = 293/579 (50.60%), Postives = 376/579 (64.94%), Query Frame = 1
Query: 376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGGTI--EDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
V++ G D VN+ F GNTA GGAL L+GT E+ NCSF+EN SD GG A+ IG VS + SFS NV+ C+ G + G + + IC+GC E C C + E + +P C A EHS S GGT+ + LVI+ GYWR T S ++LECY A AC GGVTG++ YC +GYEG YC+VCS Y LG CSKCS G I L V + G V L + VSG GR +V R +P+ ++KI+IV WQILTQF+ VA + +P +YQRFLD +++ NFDL W ++ C+ DVDFH LLVST+AP+ L FLA Y A R+ HRS+ L+ +W KH+S+VL LTFLVY+SVS+V+FQ F CE+LDD KNYLRADY IECDS KH VY+ M++LY VGIPALY LF +L D A RE + T DLWKPYRP+ FYYEVIEC RR+LL G V+ + +T+AQ+A L++AV FA++ E LAPY SR D W+ R GHAVV SMY ALL K ++S++ +SQ+VFE +L+ V MV VV + + A S VEKR
Sbjct: 390 VDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVS-NIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVE----CEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLA-AVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKR 962
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 512 bits (1318), Expect = 1.940e-157 Identity = 304/718 (42.34%), Postives = 416/718 (57.94%), Query Frame = 1
Query: 7 RASTLTWSGETNFTSNKAGLHGGAVGSEDVDRIMAVSTDSTIASGERSSIDISXXXXXXXXXXXXXXGGMALLA-TDDGPKLDGVKFVLNSATSDGGGVYATAS-------------KVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGGTI--EDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILADG-ARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
+ STL +G T F +N G +GGA+ + G +++I GG ++ T GP G +F+ NSA GG V S T ++S G DA VN+ F+GN A GG L L+GT + CSF++N SD GG A+ IGS+ ++ +FS NVF+C+ G Y YN GN + C GC C+GC E PTC EH S GGT+ EDL ++ GYWR + S ++ CY + AC GGVTG YC +GYEG YC+VCS+ Y L C++CSG G I LA L + + +A + +SG G +V + IP+ ++KI+IV WQILTQF+ VA VTYP++Y+RFLD +DV NFDLSW ++ CI D+DFH LL ST++P+ L FLA TY AV +R + A +L+ IW KH+S+VL LTFL+YSSVS+ +F+ F CE+L+D NYLRADY+I+CDS+KH+ VY+ M+++Y VGIPALYA+LLF R +L D A RE T DLWKPY+P+ FYYEVIECGRR+LL G V+ + +T+AQ+A LM+A +F ++ E LAP+ S+ D W++RTGH VV+ SMY ALL K ++S + SQ+V+E VL+ M+ V VL +S VE+R
Sbjct: 551 QGSTLVMNGTTAFVNNTCGANGGAL---------------ALLGG--LAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQV-GGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVS-NIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFF-------EPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGK-AESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQR 1241
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 501 bits (1290), Expect = 1.040e-155 Identity = 303/722 (41.97%), Postives = 413/722 (57.20%), Query Frame = 1
Query: 13 STLTWSGETNFTSNKAGLHGGAVGSEDVDRIMAVSTDSTIASGERSSIDISXXXXXXXXXXXXXXGGMALLATDDGPKLDGVKFVLNSATSDG-----------GGVYATASKVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKRMVDRERVAP 2130
STL+ G T F +N +G +GGA+ + ++ +GE S +D S G + + T GP V F NSA G GG T V+S +G D +T FRGN A GGAL L+G + NCSF+EN SD G A+ +G +S++ +FS NVFNC T+ +Y G+ D C+GC TC+GC+ + +P C HS S GG T+E L ID GYWR TN ST++L CY AC GG+TGA EYC +GYEG YC++CS++Y LG TCSKC GGI+LA L +G V + ++ + G + R +P+ TLKI++V WQI+TQF+ A VTYP++YQRFL+ +DV NFD+SW ++ C++D+DFH LL+ST+ P+ L FLA TY R +R +A L+ +W +H+S+VL L FLVYS VSSV+FQ F C++L+ YLRADY IECDS+KH+ VY+ M+LLYPVGIPA Y LL R +L D RE V +LW+PYRP+ +YYEVIECGRR+LLTG V+ + +T+AQ+A L++ V FA+L E L PY D WVSR HAVV+ S+Y ALL K ++SN+ +SQKVFE VL+ M+ V + +L S R+ +++ AP
Sbjct: 317 STLSIDGPTAFVNNTSGENGGALA-------LLGGLSISVNTGETSFVDNSANLAG---------GAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVS-NVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--------QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAAT-LQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPS----RVKEQDEPAP 1007
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 511 bits (1316), Expect = 3.840e-155 Identity = 290/583 (49.74%), Postives = 382/583 (65.52%), Query Frame = 1
Query: 376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCS-GSTGGIVLAVFLGTLGTAMGVILALHLVSGAEG-GRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILAD-GARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
+NS G DAI N+ F GN+A GGAL L+G ++NCSF EN SD G A+ IG +S + SF N F+C GT+ + G + + ICNGC TC+GC+ + E P C +HS S GG T++ L ID G+WR + ST++L CY+A AC GGVTGA YC +GYEG YC +CS+ Y L CSKCS S GGI +AV L L + V + ++ SG G GR +V L R IP+ +LKI+IV WQILTQF+ VA VTYP++YQ LDV+DV NFDLSW ++ C+VD++FH LLVST++P+ L LA TY A R +R L IW KH++VVL LTF VYSSVSS +F+ F C+ LD SK+YLRADYSIEC+S++HR + VY+ M+++Y VGIPALYA LLF R +L D RE V+ +LW+PY+PA FYYEVIEC RR+LL G V+ + +T+AQ+A L++A +FA+L E LAPY SR D W+SR GH VV+ SMY ALL K ++S++ +SQ+VFE VL+ V M+ V + AAV A+S E+R
Sbjct: 923 INSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVS-NIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCV------FAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPE-KLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERR 1497
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 502 bits (1293), Expect = 6.400e-151 Identity = 274/613 (44.70%), Postives = 375/613 (61.17%), Query Frame = 1
Query: 376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA--DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKRMVDRERVAPLDDFSD------LEGSIWHVRTQP 2184
++S G D V+T F N A GGAL L+GT + +CSF+EN SD GG A+ IG+V + SFS N F+C +GT+ YN ++ + +CNGC C C + + +PTC EHS S G T+E L I GYWR T T++L CY+A AC GGVTG YC +GYEG YC++CSE Y + TC CS + GGI LA L +G + V + ++ SG G+G +V R IP+ ++KI++V WQI+TQF++VA VTYP +YQ FL+ ++V NFDLSW ++ C+VDVDFH LL++T+ P+F L TY AVR HR + L ++ KH+ +VL LTF VYSSVS+ +F+ F CE L+D K YL ADY IECDS+KH+ VY+ M+LLY GIPALY++LLF R +L + A ++ T DLWKPY+P+ FYYEV+EC RR+LL G V+ + ++SAQ+A L+VA +F ++ E LAPY SR D W++R GH VV SMY ALL K ++S + +SQ VFE VL+ V+MV V VLA + E+R + L F ++ W+ T P
Sbjct: 1024 IDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVS-NIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQ----TACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATET-LENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSSGKAKAMQTHKWNAGTMP 1630
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 1.180e-146 Identity = 286/705 (40.57%), Postives = 387/705 (54.89%), Query Frame = 1
Query: 1 ITRASTLTWSGETNFTSNKAGLHGGAVGSEDVDRIMAVSTDSTIASGERSSIDISXXXXXXXXXXXXXXGGMAL-----LATDDGPKLDGVKFVLNSATSDGGGVYATAS----------------------------------------KVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA--DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQK 1968
I AST +W+G TNFTSN+A GGA I++ DS E S+++ + GGMAL L D G+ F+ N+A GG V+ +++ T +++ G D V+T F N A GGAL L+GT + NCSF+EN S+ GG A+ IG VS +K +FS N F+C G + +YN ++ + +C+GC + E +P C EHS S G T+E L I GYWR T S ++L CY+ +AC GGVTG YC +GY+G YC+VCS + G TC +CS S GGIVLAV L G V++ ++ SG GRG +V IP+ ++KI++V WQ++TQF+ VA +TYP++YQ FLD + + NFDL W ++ C+ DVDFH LL+ST+ P+ + LA TY A R HR + L+++W KH+ VVL L+F VYSSVSS +F+ F CE L D KNYLRADY IECDS++H+ VY+ MML+Y VGIP LY +LL+ R L D + V T DLWKPYRP+ FYYEVIECGRR+LL G V+ + ++ AQ+A L++A F ++ E L+PY SR D W+SRTGH VV SMY ALL K
Sbjct: 675 IRNASTASWTGVTNFTSNQAFFDGGA--------IVSPQLDSEYNPSE-STLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEM---GISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVS-NIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXA----FAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 487 bits (1253), Expect = 2.540e-143 Identity = 274/583 (47.00%), Postives = 364/583 (62.44%), Query Frame = 1
Query: 376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTC----EGCILCNTCHYGEDKNIPTCEPAKEHSESYGGT--IEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
V + G D V+ F GGAL L+GT + NCSF+EN S+ GG A+ IGS+SKMD S+ NVF+C G + +N G+ ++ C+GC +GC + E +P C A EH+ S GGT I L +D+G+WR T + D+L CY A AC GVT + C GYEG YCS+CS+ Y GL CS+CS S GGI+LA FL + + V + ++VS G V R IP+ + KI++V WQILTQF+ VA VTYP++YQRFLD + V NFDLSW ++ CIV VDFH LL+ST+ P+ L FL +TY A R +R + L+ IW +H+S+VL LT VYSSVSS +FQ F CE L D + YLRADY I CDS+KH+ + VY+ M+++Y VGIPALY LLF R +L GA RE V T +LWKPY+P+ FYYEVIECGRR+LL G V+ + +T+ Q+A L++A +F ++ E LAPY SR D W+SR GHAVV+ SMY ALL K ++SN+ SQ+VFE VL+ M+ V+ I VL + V +R
Sbjct: 1479 VETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVS-NIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-------FEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATET-LQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGER 2052
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 474 bits (1219), Expect = 5.510e-142 Identity = 270/616 (43.83%), Postives = 370/616 (60.06%), Query Frame = 1
Query: 244 KLDGVKFVLNSATSDGGGVYATASKVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGN-IDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLA 2079
K D +F+ N AT+ GG V +S G D +VN+ F+GN+A++GGAL L+G S G A+ IG VS M SF+ N F C + Y+ N + +C+GC + C+ C + E +PTC +H S GG T+E L ID GYWR T+ S +IL CY A AC GGVTG YC + YEG YCS+CS+ Y LG +CSKC +GGIV AV + L + V++ ++++SG G R ++ +P+ ++KI+IV WQILTQF+ A V YP +YQ+FLD + V FDL W ++ C++D+ FH LL +T+ P+F + LA TY A R +R + LR IW KH+ V L LTFLVYSSVSS +F+ F C++L+D KNYLR DY IECDS+KH+V VY+ M+LLYP+GIP LY+ LLF R +L D A R+ V+ T +LW+PY+P+ FYYEVIECGRR+LLTG V+ + +T+AQ+A LM+A FA+L E ++PY SR + WV+R GH VV SMY ALL K ++S++ SQ VFE VL+T M+ V + V+A
Sbjct: 821 KFDRCRFIDNVATTSGGAV--------------------------DSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVS-NIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCR----VACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANE-KLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 478 bits (1231), Expect = 1.280e-141 Identity = 260/574 (45.30%), Postives = 359/574 (62.54%), Query Frame = 1
Query: 376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA--DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYS 2085
+ + G D +N+ F N A +GGAL L G+ +TNC+F++N ++ + GPA+ +G + FS NV +CENG Y + +G+ +C+GC + G+ +P C +H+ S GG TIE L + GYWR TNDS ++L CY AC GG+T +C +GYEG YCSVCSE Y L TC++C GGI + V +G + L +HLVSG G +++ ++ +P+ ++KI++V WQILTQFS VA VTYP++YQRFLD V+++NFD+ W + C+V+VDFH LLV+T+ PL L LA TY VA RR A AL+ I KH+S+VL +TFLVYSSVS+ +FQ F CE LDD K YLRADY IECDS++H+ V++ M+L+YPVGIP Y YLL+ R +L D +R+T VQ DLW PY+P RFYYEVIEC RR+ LTG V+ + +T+AQVA LM+A SF + +LAPY S+ D +S GH +V+ SMY ALL K ++S++ SQ+VF VL+ MV V + V+ YS
Sbjct: 1188 IETAAGYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAE-DEGPAVS-NLGVLDLEGTSRFSGNVLSCENGMYLD-SVDGDRYQTVCDGCPVNNSDWIVSVENGD--RVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEA-ALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 471 bits (1211), Expect = 1.480e-139 Identity = 266/577 (46.10%), Postives = 362/577 (62.74%), Query Frame = 1
Query: 376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNID-DIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKC-SGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEG-GRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAY 2082
+ S G DA + F GN+A GGAL L+G NCSF+ N +D G A+ IG +S ++ FS N F+C + Y + + + +++C+GC TCEGC+ + E +P C EH+ S GG T+E L ID GYWR T S D+L CY+A+AC GGVT YC +GYEG YCSVCS Y LG CSKC +TGGIV+ V L T + + ++ SG +G G G + R IP+ ++KI+I WQILTQF+ +A VTYP++Y+ FL V+D+ NFDL WA++V C +D+DFH LLVST++P+ L FLA TY+ A +R R L ++ KH S+VL LTF VYSSVSS++F+ F CE+L D K YLR+DY IECDS+KH+ VY+ M+L+Y VGIPALYA LLF R +L D ++R V DLW+PY FYYEVIECGRR+LL G V+ + +T+AQ+A LM+A +F ++ E L PY+S D W++R GH VV+ SM+ LL K +S++ ASQ+VFE VL+ LMV + + VL +
Sbjct: 1033 IESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVS-NIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCV------FDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYR-RKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFF 1601 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14281.2961.1 >prot_H-elongata_contig14281.2961.1 ID=prot_H-elongata_contig14281.2961.1|Name=mRNA_H-elongata_contig14281.2961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=710bp MAVSTDSTIASGERSSIDISGRTNFIDNMSGGSGGGMALLATDDGPKLDGback to top mRNA from alignment at H-elongata_contig14281:1479..5859- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14281.2961.1 ID=mRNA_H-elongata_contig14281.2961.1|Name=mRNA_H-elongata_contig14281.2961.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4381bp|location=Sequence derived from alignment at H-elongata_contig14281:1479..5859- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14281:1479..5859- >mRNA_H-elongata_contig14281.2961.1 ID=mRNA_H-elongata_contig14281.2961.1|Name=mRNA_H-elongata_contig14281.2961.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4260bp|location=Sequence derived from alignment at H-elongata_contig14281:1479..5859- (Himanthalia elongata Himel1 dioecious)back to top |