mRNA_H-elongata_contig142150.2915.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: D7FHL3_ECTSI (Phosphatidylinositol transfer protein PDR16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL3_ECTSI) HSP 1 Score: 213 bits (541), Expect = 6.680e-67 Identity = 95/144 (65.97%), Postives = 115/144 (79.86%), Query Frame = 1
Query: 1 QVLKESSDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSGS 432
+V + DV+ EN TGK YVSGFD GRP++++RPR ENT DHDGN+KH+VYQ+ER R ILQ+ S G GK C++IDY+GFTLR + MKTSM + ILQNHYPETLG A+F+SPPVVF+GFWKVI PFIDK TK+KF FV GS
Sbjct: 70 EVFSKEMDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSDGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKVIYPFIDKDTKEKFTFVPGS 213
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A835Z4E3_9STRA (Phosphatidylinositol transfer protein PDR16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E3_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.980e-52 Identity = 81/142 (57.04%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 16 SSDVVAT---ENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSGS 432
S D++ T EN TGKIYV G D QGR +IMRP ENT HD +KHLVYQMERAR LQ+ + G GK+C+VIDY G++LR + PM+TS + I+Q+HYPE LGV+Y ++PP +F GFWK+I PFID T+ KF+FV+ S
Sbjct: 72 SGDIMETIRRENATGKIYVRGEDTQGRVCLIMRPSQENTHMHDDQMKHLVYQMERARLTLQRKTSGMGKLCMVIDYAGYSLRNAPPMRTSRSTLNIVQDHYPELLGVSYMMNPPYIFTGFWKIIYPFIDHVTRQKFVFVNSS 213
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A7S2V1P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1P1_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.500e-51 Identity = 80/135 (59.26%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 19 SDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFV 423
+DV+ +EN TGKIY GFD QGR +M MRPR ENT +H+GN++HLVY MERA I++ G KICLVIDY G+ L + PMKTS + IL ++YPE LGVAYFV PP +F+ FWKV PFID TK KFIF+
Sbjct: 6 ADVIRSENATGKIYCRGFDEQGRVIMYMRPRNENTKNHEGNLRHLVYHMERAIAIMKAKGQGVEKICLVIDYEGYNLHNAPPMKTSKATLHILSDYYPERLGVAYFVHPPWIFKAFWKVFYPFIDPVTKSKFIFL 140
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A482SXI4_9ARCH (CRAL-TRIO domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXI4_9ARCH) HSP 1 Score: 149 bits (375), Expect = 1.600e-42 Identity = 72/138 (52.17%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 19 SDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSGS 432
+D +A EN TGK Y G+D++GR ++ MRP ENT +HDGN+KHLVY MERA +KN G K+ LVIDY G++L + PMKT+ + +TILQ+HYPE L AY V PP VF F+ +I+PFID TK K + S
Sbjct: 21 NDTIALENSTGKTYARGYDKEGRVILYMRPACENTNNHDGNMKHLVYSMERAVACAEKN--GQEKLSLVIDYNGYSLSSAPPMKTARETLTILQDHYPERLHRAYCVHPPFVFWAFFNMISPFIDPVTKQKIYMATNS 156
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A7S1TTS4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTS4_9STRA) HSP 1 Score: 150 bits (379), Expect = 8.900e-41 Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 37 ENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSG 429
EN TGK Y GFD++GR V+ M+PR ENT DHDGN+ HL+Y MERA + + G K LV+DYL ++L + PMKTS + ILQ+HYPE LGVAY ++PP +FR W I+PFID T +K FV G
Sbjct: 178 ENATGKTYARGFDKRGRVVLYMKPRYENTNDHDGNIVHLIYNMERACAMQRTAGTGVEKFALVVDYLDYSLSNAPPMKTSRLTLDILQSHYPERLGVAYLLNPPWIFRAAWAAISPFIDPVTYEKIQFVVG 308
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A7S1GN50_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN50_CYCTE) HSP 1 Score: 145 bits (366), Expect = 1.130e-40 Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 13 ESSDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSGS 432
E D++ ENETGKIYV GFD +GR M MRP ENT N++HLVY +ERA + SG KI L+IDY G+ LR PM T+ + ILQ HYPE + AY ++PP+VFR FW +I PF+D TK+K +F G+
Sbjct: 93 EMRDILLKENETGKIYVRGFDNEGRAAMYMRPHHENTHQELNNMRHLVYNLERAIACTGRKSG-LEKINLMIDYAGYRLRDMPPMSTARHTLDILQKHYPERMFKAYVINPPLVFRTFWTIIKPFLDPITKEKIVFCHGA 231
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A7S2HGU9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGU9_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.990e-40 Identity = 68/140 (48.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 10 KESSDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSG 429
+E +V++ EN+TGK YV G+D++GR V+ MRP LENT D G ++HLVY +ERA ++ SG K ++IDY GF +R + PM T+ + ILQNHYPE+L AY +PP++FR FW +I+PF+D TK K +F G
Sbjct: 113 EEMRNVMSLENKTGKCYVRGYDKEGRAVLYMRPVLENTKDEIGQMRHLVYNIERAIACTKRKSG-LEKYNIIIDYKGFRIRDAPPMSTTKHTLAILQNHYPESLYRAYLFNPPMIFRTFWTMIHPFLDPVTKKKILFCHG 251
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: B8CG82_THAPS (CRAL-TRIO domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG82_THAPS) HSP 1 Score: 140 bits (354), Expect = 3.320e-39 Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = 1
Query: 7 LKESSDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSG 429
L++ +D +A ENETGKIY G+D+QGR ++ + P EN+ + N+KHLVY +ERA +++SG K+C+VI Y GF L + PM T+ +TILQ HYPE + AY PP+VFR FW VI F+D T +K F SG
Sbjct: 36 LRQLADTIAHENETGKIYCRGYDKQGRAILYLTPGRENSTNELNNMKHLVYHLERAIACTRRHSGR-EKVCIVIGYEGFKLSNAPPMSTTKHTLTILQGHYPERMFRAYICDPPLVFRTFWSVIRHFVDPCTLEKIAFCSG 175
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A1E7FSG3_9STRA (CRAL/TRIO domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSG3_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.690e-38 Identity = 70/135 (51.85%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 25 VVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSG 429
++ ENETGKIYV +D+ GR M MRP ENT N++HLV+Q+E+A KN GF KICLVIDY GFT+ KS P+ TS Q + ILQ HY E + AY +PP VFR F+ V+ PF+D TK K F G
Sbjct: 64 ILRKENETGKIYVRSYDKDGRAFMYMRPGNENTNSEKNNMRHLVFQIEKAVRCSLKN--GFSKICLVIDYEGFTISKSPPISTSRQTLDILQRHYCERMYRAYICNPPFVFRSFYAVVKPFVDPVTKRKVCFCVG 196
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Match: A0A7S1CRX9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CRX9_9STRA) HSP 1 Score: 136 bits (342), Expect = 9.060e-38 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 7 LKESSDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHLVYQMERARTILQKNSGGFGKICLVIDYLGFTLRKSVPMKTSMQIMTILQNHYPETLGVAYFVSPPVVFRGFWKVINPFIDKATKDKFIFVSG 429
L ++V+A ENETGKIY G+D++GR V+ + P EN+ N++HLVY +ERA + SG K+C+VI Y GF + + PM + ILQ HYPE + AY PP+VFRGFWKVI FID AT DK F +G
Sbjct: 7 LNHLAEVIAKENETGKIYCRGYDKEGRAVLYLTPGRENSQCEIDNMRHLVYHLERAIACTRHKSGR-QKVCIVIGYQGFRIANAPPMSVVKHTLQILQGHYPERMFRAYIADPPMVFRGFWKVIKHFIDPATLDKIAFCTG 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142150.2915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig142150.2915.1 >prot_H-elongata_contig142150.2915.1 ID=prot_H-elongata_contig142150.2915.1|Name=mRNA_H-elongata_contig142150.2915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp QVLKESSDVVATENETGKIYVSGFDRQGRPVMIMRPRLENTFDHDGNVKHback to top mRNA from alignment at H-elongata_contig142150:725..1680+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig142150.2915.1 ID=mRNA_H-elongata_contig142150.2915.1|Name=mRNA_H-elongata_contig142150.2915.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=956bp|location=Sequence derived from alignment at H-elongata_contig142150:725..1680+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig142150:725..1680+ >mRNA_H-elongata_contig142150.2915.1 ID=mRNA_H-elongata_contig142150.2915.1|Name=mRNA_H-elongata_contig142150.2915.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig142150:725..1680+ (Himanthalia elongata Himel1 dioecious)back to top |