mRNA_H-elongata_contig1421.2911.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D7FLV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI) HSP 1 Score: 283 bits (724), Expect = 6.460e-91 Identity = 164/328 (50.00%), Postives = 213/328 (64.94%), Query Frame = 1
Query: 1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDH--------------HAACVVSNEENRSTLV-LRTTEHSEQDLLPAEAINQA-RMNGVVMGAEHADLSSTPPLSPL----EGGV-----SLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTG---FFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
A+GALL A+LLHIIPEA+EGL+S +++LH +G+ A + +L G+F +V+H +E HSH P+ H H A V ++ ST++ L E + P QA ++ V SST L L EG LQPVCWN++IGDLVHNFADGVTIGAAFL CS+TIGWTVTASAVLHE+PHE+ADFMAL+NGGMS QA +NF+SALSAVLG +++L+L +TL+ DV+ +LL+G GSFIFI L+EL+PEAL V+H + + KL SFV+GA LIG+PLLFD+HCD GH+H
Sbjct: 30 ASGALLTAALLHIIPEAMEGLDSSYDNLHDLGLYASLTVLSGLFVSIVIHGLMESGHSHSPNEAHSHGGGEETVRPGGGNGHHARVS---DDASTMMPLGLAEGDKVSAWPGGNSPQAVQIQADVTQPPSPAESSTDNLRALIAEREGRSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILSLGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALAVTHAVSEKGAVAMMCSQLLKLGSFVLGAILIGLPLLFDQHCDAAHEGHDH 354
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A6H5L662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE) HSP 1 Score: 283 bits (725), Expect = 1.360e-88 Identity = 159/325 (48.92%), Postives = 210/325 (64.62%), Query Frame = 1
Query: 1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDH------------HAACVVSNEENRSTLVLRTTEHSEQDLLPA-EAINQARMNGVVMGAEHADLSSTPPLSPL---EGGVSL------QPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTG---FFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
A+GALL A+L+HIIPEA+EGL+S +++LH +G+ AG+ +LGG+ VV+H +E HSH PH H H ++ +T+ L E + P + + ++ V SST L L G SL QPVCWN++IGDLVHNFADG+TIGAAFL CS+T+GWTVTASAVLHE+PHE+ADFMAL+NGGMS QA +NF+SALSAVLG +++LAL +TL+ DV+ +LL+G GSFIFI L+EL+PEAL V+H + + KL SF++GA LIGIPLL D+HCD GH+H
Sbjct: 228 ASGALLTAALVHIIPEAMEGLDSSYDNLHDLGLYAGLTVLGGLSVSVVIHGLMESGHSHSPHEGHSHGGGTETVRPGGGHGHHARVSDGAGTTMPLGMAEGDKVSAWPGGNSPHAVQIQADVTQPPSPAESSTDNLRALIAERAGRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILALGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALVVTHAVSEKGAVAVMCSQLLKLGSFLLGAILIGIPLLVDQHCDAAHEGHDH 552
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI) HSP 1 Score: 278 bits (712), Expect = 4.270e-87 Identity = 154/303 (50.83%), Postives = 198/303 (65.35%), Query Frame = 1
Query: 1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFF---PSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
A+GALL A+LLHIIPEALEGLE + LH +G+ AG+A++GG+ G+VLHA LE HSH P V + T + P E+ N + ++ + L L+PVCWN+I GDLVHNFADGV IGAAFL CS+T+GWTV AS VLHE+PHE+ADFMAL+NGGMS MQA ++NF+SALSAVLG V++LAL++TL+ D+A +LL+G GSFIFI L EL+P AL V+ +R G + KL SF++GA +IGIPLLFDEHC +GH+H
Sbjct: 222 ASGALLTAALLHIIPEALEGLEESYGSLHDLGLYAGLAVMGGMSLGIVLHALLESGHSHSPGESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVES-NSDNLQALISARKGKSLLDVK---------GLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKRGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCG---TGHDH 511
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.240e-76 Identity = 145/303 (47.85%), Postives = 186/303 (61.39%), Query Frame = 1
Query: 1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTG---FFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
A+GALL ASLLHI+PE+LEG+ +E++ LH G+ AG+AILGGI F +++HA LE H A A L+ T L L+PVCWN+I G+LVHNFADGVTIGAAFL C S++GWT+TAS VLHEIP ELADF+AL+ GGMS QA LFNF+SAL+ VLG V++L+LR+ L+ ADV+ ILL+G GSFIFI L EL+P AL+V+ + G M+KL SFV+GA+LIG L+FD+HC+ GH+H
Sbjct: 103 ASGALLTASLLHIVPESLEGIAAEYDHLHDAGLWAGLAILGGIGFSILIHALLESGHX-----------------------------XXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALTDKERSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAGGMSLKQAFLFNFLSALTCVLGAVVILSLRSQLSDADVSVILLLGSGSFIFIALTELLPGALEVTKAESDKAGGAVMCNQMKKLGSFVLGAALIGGALIFDQHCE--AEGHDH 374
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A6H5KN39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.650e-64 Identity = 135/304 (44.41%), Postives = 182/304 (59.87%), Query Frame = 1
Query: 1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSH--GPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHC--DDGESGHNH 900
A GA+L A+L+HIIPE+ E E LH +GI GV +L GI +++ A HSH P + A VV + ++S TT ++L E + Q + L +G L+P+CWN+I+GD VH+F G TIGAAFL C ST+GWT+TAS ++HE+P E+ADF+AL+NGGMS QA+ +N S + A+LG VL+L L + T+ +A ILL+G GSFIFIGL EL+PEAL + D K G S+RKL SF GA +IGIPL+F HC D+G GH+H
Sbjct: 236 ATGAILTAALIHIIPESFERFEDAELGLHDLGIHTGVTMLAGITASIIIRAVCTAGHSHTGAPAT------AKVVGADGSQSRGP--TTPTIPENLW--ELVQQRKGRA---------------LFDFKG---LKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLASGIPAILGAVLILGLGDQFTTFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGK---GLGDSLRKLGSFAFGALVIGIPLMFHAHCHADEGHEGHDH 508
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D7FRW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.290e-63 Identity = 133/296 (44.93%), Postives = 178/296 (60.14%), Query Frame = 1
Query: 1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSH--GPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCDDG 882
A GA+L ASL+HI+PE+ E E L+ +GI GV +L GI V++ A HSH P + A VV + +S TT +LL E + Q + L +G L+P+CWN+I+GD VH+F G TIGAAFL C ST+GWT+TAS ++HE+P E+ADF+AL+NGGMS QA+ +N +S + A+LG VL+LAL + T+ +A ILL+G GSFIFIGL EL+PEAL ++ D K G S+RKL SF GA +IGIPL+F HC G
Sbjct: 240 ATGAILTASLIHIVPESFERFEDSELGLYDLGIHTGVTMLAGITASVIIRAVCTAGHSHTGAPAT------AKVVEADGGQSRGP--TTPTIPDNLL--ELVEQRKGRA---------------LFDFKG---LKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSLTMDGK---GLGDSIRKLGSFAFGALIIGIPLMFHAHCHAG 504
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A7S4DBT4_HETAK (Hypothetical protein n=8 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBT4_HETAK) HSP 1 Score: 156 bits (394), Expect = 6.760e-40 Identity = 99/302 (32.78%), Postives = 154/302 (50.99%), Query Frame = 1
Query: 7 GALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSM--RKLLSFVIGASLIGIPLLFDEHCDDG--ESGHNH 900
GA+LAA+LLH+IPE +E+ F D +G AG ILGG+ F +++HA + +R+ S + P + + A + E ++T ++P WN+++GD +HN DG+ I AF GC +++GWT+ + + HEIP E+ADF L++ G+S +QA+L N S AVLG +++L L + + Y+LL G G F+F+G AEL+P+ L + R TG P +L F +GA ++ +PLL HCD G H+H
Sbjct: 265 GAILAAALLHLIPEGYAYIEA-FVDEEAIGWKAGATILGGLSFSLLVHAGF---------AQHXXXXXXXXXXXXXXXXXXVRSGSGSRVEEAPPQELEVADVKKAAGPKEKRSAAATL--------AEVRPQAWNVVVGDALHNCLDGMVIAVAFAGCGNSMGWTILGAVMAHEIPQEIADFFVLLDSGLSFVQALLLNLFSGFCAVLGGIIVLTAPG-LDAEGIGYMLLFGSGIFLFVGAAELLPDLL-----SGRGTGGAPKALGTRLALFALGAVVVSLPLLAHLHCDAGFLAGAHDH 542
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A6V1U7C3_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK) HSP 1 Score: 153 bits (386), Expect = 8.240e-39 Identity = 109/338 (32.25%), Postives = 169/338 (50.00%), Query Frame = 1
Query: 7 GALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSE------QDLLPAEAIN---QARMN----------GVVMGAEHAD---------------------LSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
GALL+A+++H+IPE +ES F D ++G AG+ ILGG+ F ++LH + + H H D C V EE + T E S + L AEA+ +A+++ G+ E D L++ P + P+ G ++P WN+++GD + N DG+ I AF GC S++GW V + + HEIP E+ DF LI+ G+S QA+L N S + A+ G +++L L ++LT+ V Y+LL G G F+F G AEL+PE L K ++ + +GA+ + + L+ HCD G G H
Sbjct: 229 GALLSAAIVHLIPEGYALIES-FVDGEQLGTNAGLTILGGLMFSLILH--MAIQHKHAA---VDAEPGCSVK-EERAAVAPTSTFEASPGGDDVVEMALEAEAVEGPPEAQVHVEGDSCDDECGLAATNEVGDCNDCAEEGGGRLRQGRSAVKLLAALPRVGPVRG---VRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLIDSGLSFGQALLANLFSGVCAIFGGIIVLLLNSSLTADVVGYMLLFGSGMFLFAGAAELLPELLAAPGGPKL------AVARAAMVALGAAAVVVSLMSHAHCDAGFLGAAH 550
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: K3WNM1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNM1_GLOUD) HSP 1 Score: 150 bits (379), Expect = 2.990e-38 Identity = 97/292 (33.22%), Postives = 156/292 (53.42%), Query Frame = 1
Query: 4 AGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSD-QDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCD 876
AGAL ++LHI+PE++E SE+ ++ + + G +V+ LE+ H + + HH V ++ + + ++ T S+Q+ + A + + M D S P S ++PV + I+IGDL HNF DGV I AFL C +G VTASA+LHE P E+ADF+ LI+ G +K QAV FNFISALS+ LG +++L+ T+T+ + +L G G+ ++I +L+P L+V RT + ++ F +G ++ + L+ HCD
Sbjct: 208 AGALFGTAILHILPESIE-FHSEYGQMN---LTICTVFIAGFMIAMVVEMLLELFIGHFTDTGVEGHHHHQVPASGDKEAMKMVSPTTPSQQERTSHQPFTDA--SAMEMDTVGRDSSPQSPWSLKVEWTKIKPVAYIILIGDLFHNFVDGVLIATAFLACDDALGIAVTASAILHEAPQEIADFVVLIDAGFTKFQAVTFNFISALSSFLGAIIILS-SITVTNETMGLLLGFGAGTLVYISATDLLPRVLRV------RT-IVDFITRIFLFAVGVGMLALTTLYHVHCD 485
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A0P1AM43_PLAHL (Serine threonine protein phosphatase 2a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM43_PLAHL) HSP 1 Score: 135 bits (339), Expect = 8.860e-32 Identity = 86/278 (30.94%), Postives = 149/278 (53.60%), Query Frame = 1
Query: 4 AGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGAS 837
AGAL A+ LHI+PE++E + + + + V + + + L ++ + H+ H A V+ +E + + T E++ D + + N+ ++ + + +++P+ + I++GDL HNF DGV I AFL C ++G +VTASAVLHE+P E ADF+ L++ G + QAVLFNF+SALSA +G +++LA +T+ + +L +G G+ ++I +L+P L+V + G+F + LL F IG +
Sbjct: 223 AGALFGAAFLHILPESIEFYSAYGQMNFTLSMMFTVGFVVAMVVEMALELWVSLVQDGESHTHDHHPATIVLDHETGKQNVTPETGEYNAADTVSLSSQNETSVSVFSLKVDWQ---------------TIKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGISVTASAVLHELPQEFADFIILVDSGFTPFQAVLFNFLSALSAFVGAIVVLA-AVPVTNETMGLLLAVGSGTLVYIAGTDLLPGVLRV-----KSFGYF--VINLLMFGIGVA 477 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1421.2911.1 >prot_H-elongata_contig1421.2911.1 ID=prot_H-elongata_contig1421.2911.1|Name=mRNA_H-elongata_contig1421.2911.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHback to top mRNA from alignment at H-elongata_contig1421:13944..15207- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1421.2911.1 ID=mRNA_H-elongata_contig1421.2911.1|Name=mRNA_H-elongata_contig1421.2911.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1264bp|location=Sequence derived from alignment at H-elongata_contig1421:13944..15207- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1421:13944..15207- >mRNA_H-elongata_contig1421.2911.1 ID=mRNA_H-elongata_contig1421.2911.1|Name=mRNA_H-elongata_contig1421.2911.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1806bp|location=Sequence derived from alignment at H-elongata_contig1421:13944..15207- (Himanthalia elongata Himel1 dioecious)back to top |