mRNA_H-elongata_contig1421.2911.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1421.2911.1
Unique NamemRNA_H-elongata_contig1421.2911.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D7FLV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 6.460e-91
Identity = 164/328 (50.00%), Postives = 213/328 (64.94%), Query Frame = 1
Query:    1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDH--------------HAACVVSNEENRSTLV-LRTTEHSEQDLLPAEAINQA-RMNGVVMGAEHADLSSTPPLSPL----EGGV-----SLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTG---FFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
            A+GALL A+LLHIIPEA+EGL+S +++LH +G+ A + +L G+F  +V+H  +E  HSH P+    H              H A V    ++ ST++ L   E  +    P     QA ++   V        SST  L  L    EG        LQPVCWN++IGDLVHNFADGVTIGAAFL CS+TIGWTVTASAVLHE+PHE+ADFMAL+NGGMS  QA  +NF+SALSAVLG +++L+L +TL+  DV+ +LL+G GSFIFI L+EL+PEAL V+H    +         + KL SFV+GA LIG+PLLFD+HCD    GH+H
Sbjct:   30 ASGALLTAALLHIIPEAMEGLDSSYDNLHDLGLYASLTVLSGLFVSIVIHGLMESGHSHSPNEAHSHGGGEETVRPGGGNGHHARVS---DDASTMMPLGLAEGDKVSAWPGGNSPQAVQIQADVTQPPSPAESSTDNLRALIAEREGRSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILSLGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALAVTHAVSEKGAVAMMCSQLLKLGSFVLGAILIGLPLLFDQHCDAAHEGHDH 354          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A6H5L662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.360e-88
Identity = 159/325 (48.92%), Postives = 210/325 (64.62%), Query Frame = 1
Query:    1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDH------------HAACVVSNEENRSTLVLRTTEHSEQDLLPA-EAINQARMNGVVMGAEHADLSSTPPLSPL---EGGVSL------QPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTG---FFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
            A+GALL A+L+HIIPEA+EGL+S +++LH +G+ AG+ +LGG+   VV+H  +E  HSH PH    H            H      ++   +T+ L   E  +    P   + +  ++   V        SST  L  L     G SL      QPVCWN++IGDLVHNFADG+TIGAAFL CS+T+GWTVTASAVLHE+PHE+ADFMAL+NGGMS  QA  +NF+SALSAVLG +++LAL +TL+  DV+ +LL+G GSFIFI L+EL+PEAL V+H    +         + KL SF++GA LIGIPLL D+HCD    GH+H
Sbjct:  228 ASGALLTAALVHIIPEAMEGLDSSYDNLHDLGLYAGLTVLGGLSVSVVIHGLMESGHSHSPHEGHSHGGGTETVRPGGGHGHHARVSDGAGTTMPLGMAEGDKVSAWPGGNSPHAVQIQADVTQPPSPAESSTDNLRALIAERAGRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILALGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALVVTHAVSEKGAVAVMCSQLLKLGSFLLGAILIGIPLLVDQHCDAAHEGHDH 552          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 4.270e-87
Identity = 154/303 (50.83%), Postives = 198/303 (65.35%), Query Frame = 1
Query:    1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFF---PSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
            A+GALL A+LLHIIPEALEGLE  +  LH +G+ AG+A++GG+  G+VLHA LE  HSH P          V +            T  +     P E+ N   +  ++   +   L              L+PVCWN+I GDLVHNFADGV IGAAFL CS+T+GWTV AS VLHE+PHE+ADFMAL+NGGMS MQA ++NF+SALSAVLG V++LAL++TL+  D+A +LL+G GSFIFI L EL+P AL V+    +R G       + KL SF++GA +IGIPLLFDEHC    +GH+H
Sbjct:  222 ASGALLTAALLHIIPEALEGLEESYGSLHDLGLYAGLAVMGGMSLGIVLHALLESGHSHSPGESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVES-NSDNLQALISARKGKSLLDVK---------GLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKRGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCG---TGHDH 511          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.240e-76
Identity = 145/303 (47.85%), Postives = 186/303 (61.39%), Query Frame = 1
Query:    1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTG---FFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
            A+GALL ASLLHI+PE+LEG+ +E++ LH  G+ AG+AILGGI F +++HA LE  H                                                      A  A L+ T     L     L+PVCWN+I G+LVHNFADGVTIGAAFL C S++GWT+TAS VLHEIP ELADF+AL+ GGMS  QA LFNF+SAL+ VLG V++L+LR+ L+ ADV+ ILL+G GSFIFI L EL+P AL+V+     + G       M+KL SFV+GA+LIG  L+FD+HC+    GH+H
Sbjct:  103 ASGALLTASLLHIVPESLEGIAAEYDHLHDAGLWAGLAILGGIGFSILIHALLESGHX-----------------------------XXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALTDKERSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAGGMSLKQAFLFNFLSALTCVLGAVVILSLRSQLSDADVSVILLLGSGSFIFIALTELLPGALEVTKAESDKAGGAVMCNQMKKLGSFVLGAALIGGALIFDQHCE--AEGHDH 374          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A6H5KN39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.650e-64
Identity = 135/304 (44.41%), Postives = 182/304 (59.87%), Query Frame = 1
Query:    1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSH--GPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHC--DDGESGHNH 900
            A GA+L A+L+HIIPE+ E  E     LH +GI  GV +L GI   +++ A     HSH   P +      A VV  + ++S     TT    ++L   E + Q +                  L   +G   L+P+CWN+I+GD VH+F  G TIGAAFL C ST+GWT+TAS ++HE+P E+ADF+AL+NGGMS  QA+ +N  S + A+LG VL+L L +  T+  +A ILL+G GSFIFIGL EL+PEAL  + D K   G   S+RKL SF  GA +IGIPL+F  HC  D+G  GH+H
Sbjct:  236 ATGAILTAALIHIIPESFERFEDAELGLHDLGIHTGVTMLAGITASIIIRAVCTAGHSHTGAPAT------AKVVGADGSQSRGP--TTPTIPENLW--ELVQQRKGRA---------------LFDFKG---LKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLASGIPAILGAVLILGLGDQFTTFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGK---GLGDSLRKLGSFAFGALVIGIPLMFHAHCHADEGHEGHDH 508          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: D7FRW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 2.290e-63
Identity = 133/296 (44.93%), Postives = 178/296 (60.14%), Query Frame = 1
Query:    1 AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSH--GPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCDDG 882
            A GA+L ASL+HI+PE+ E  E     L+ +GI  GV +L GI   V++ A     HSH   P +      A VV  +  +S     TT     +LL  E + Q +                  L   +G   L+P+CWN+I+GD VH+F  G TIGAAFL C ST+GWT+TAS ++HE+P E+ADF+AL+NGGMS  QA+ +N +S + A+LG VL+LAL +  T+  +A ILL+G GSFIFIGL EL+PEAL ++ D K   G   S+RKL SF  GA +IGIPL+F  HC  G
Sbjct:  240 ATGAILTASLIHIVPESFERFEDSELGLYDLGIHTGVTMLAGITASVIIRAVCTAGHSHTGAPAT------AKVVEADGGQSRGP--TTPTIPDNLL--ELVEQRKGRA---------------LFDFKG---LKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSLTMDGK---GLGDSIRKLGSFAFGALIIGIPLMFHAHCHAG 504          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A7S4DBT4_HETAK (Hypothetical protein n=8 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBT4_HETAK)

HSP 1 Score: 156 bits (394), Expect = 6.760e-40
Identity = 99/302 (32.78%), Postives = 154/302 (50.99%), Query Frame = 1
Query:    7 GALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSM--RKLLSFVIGASLIGIPLLFDEHCDDG--ESGHNH 900
            GA+LAA+LLH+IPE    +E+ F D   +G  AG  ILGG+ F +++HA           +                    +R+   S  +  P + +  A +       E    ++T           ++P  WN+++GD +HN  DG+ I  AF GC +++GWT+  + + HEIP E+ADF  L++ G+S +QA+L N  S   AVLG +++L     L +  + Y+LL G G F+F+G AEL+P+ L     + R TG  P     +L  F +GA ++ +PLL   HCD G     H+H
Sbjct:  265 GAILAAALLHLIPEGYAYIEA-FVDEEAIGWKAGATILGGLSFSLLVHAGF---------AQHXXXXXXXXXXXXXXXXXXVRSGSGSRVEEAPPQELEVADVKKAAGPKEKRSAAATL--------AEVRPQAWNVVVGDALHNCLDGMVIAVAFAGCGNSMGWTILGAVMAHEIPQEIADFFVLLDSGLSFVQALLLNLFSGFCAVLGGIIVLTAPG-LDAEGIGYMLLFGSGIFLFVGAAELLPDLL-----SGRGTGGAPKALGTRLALFALGAVVVSLPLLAHLHCDAGFLAGAHDH 542          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A6V1U7C3_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK)

HSP 1 Score: 153 bits (386), Expect = 8.240e-39
Identity = 109/338 (32.25%), Postives = 169/338 (50.00%), Query Frame = 1
Query:    7 GALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSE------QDLLPAEAIN---QARMN----------GVVMGAEHAD---------------------LSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH 900
            GALL+A+++H+IPE    +ES F D  ++G  AG+ ILGG+ F ++LH  + + H H      D    C V  EE  +     T E S       +  L AEA+    +A+++          G+    E  D                     L++ P + P+ G   ++P  WN+++GD + N  DG+ I  AF GC S++GW V  + + HEIP E+ DF  LI+ G+S  QA+L N  S + A+ G +++L L ++LT+  V Y+LL G G F+F G AEL+PE L      K       ++ +     +GA+ + + L+   HCD G  G  H
Sbjct:  229 GALLSAAIVHLIPEGYALIES-FVDGEQLGTNAGLTILGGLMFSLILH--MAIQHKHAA---VDAEPGCSVK-EERAAVAPTSTFEASPGGDDVVEMALEAEAVEGPPEAQVHVEGDSCDDECGLAATNEVGDCNDCAEEGGGRLRQGRSAVKLLAALPRVGPVRG---VRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLIDSGLSFGQALLANLFSGVCAIFGGIIVLLLNSSLTADVVGYMLLFGSGMFLFAGAAELLPELLAAPGGPKL------AVARAAMVALGAAAVVVSLMSHAHCDAGFLGAAH 550          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: K3WNM1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNM1_GLOUD)

HSP 1 Score: 150 bits (379), Expect = 2.990e-38
Identity = 97/292 (33.22%), Postives = 156/292 (53.42%), Query Frame = 1
Query:    4 AGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSD-QDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCD 876
            AGAL   ++LHI+PE++E   SE+  ++   +      + G    +V+   LE+   H   +  + HH   V ++ +  +  ++  T  S+Q+    +    A  + + M     D S   P S       ++PV + I+IGDL HNF DGV I  AFL C   +G  VTASA+LHE P E+ADF+ LI+ G +K QAV FNFISALS+ LG +++L+   T+T+  +  +L  G G+ ++I   +L+P  L+V      RT     + ++  F +G  ++ +  L+  HCD
Sbjct:  208 AGALFGTAILHILPESIE-FHSEYGQMN---LTICTVFIAGFMIAMVVEMLLELFIGHFTDTGVEGHHHHQVPASGDKEAMKMVSPTTPSQQERTSHQPFTDA--SAMEMDTVGRDSSPQSPWSLKVEWTKIKPVAYIILIGDLFHNFVDGVLIATAFLACDDALGIAVTASAILHEAPQEIADFVVLIDAGFTKFQAVTFNFISALSSFLGAIIILS-SITVTNETMGLLLGFGAGTLVYISATDLLPRVLRV------RT-IVDFITRIFLFAVGVGMLALTTLYHVHCD 485          
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Match: A0A0P1AM43_PLAHL (Serine threonine protein phosphatase 2a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM43_PLAHL)

HSP 1 Score: 135 bits (339), Expect = 8.860e-32
Identity = 86/278 (30.94%), Postives = 149/278 (53.60%), Query Frame = 1
Query:    4 AGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLHAFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAINQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFADGVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVLFNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPEALKVSHDAKRRTGFFPSMRKLLSFVIGAS 837
            AGAL  A+ LHI+PE++E   +  +    + +   V  +  +   + L  ++ +      H+   H A  V+ +E  +  +   T E++  D +   + N+  ++   +  +                 +++P+ + I++GDL HNF DGV I  AFL C  ++G +VTASAVLHE+P E ADF+ L++ G +  QAVLFNF+SALSA +G +++LA    +T+  +  +L +G G+ ++I   +L+P  L+V     +  G+F  +  LL F IG +
Sbjct:  223 AGALFGAAFLHILPESIEFYSAYGQMNFTLSMMFTVGFVVAMVVEMALELWVSLVQDGESHTHDHHPATIVLDHETGKQNVTPETGEYNAADTVSLSSQNETSVSVFSLKVDWQ---------------TIKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGISVTASAVLHELPQEFADFIILVDSGFTPFQAVLFNFLSALSAFVGAIVVLA-AVPVTNETMGLLLAVGSGTLVYIAGTDLLPGVLRV-----KSFGYF--VINLLMFGIGVA 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1421.2911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLV2_ECTSI6.460e-9150.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L662_9PHAE1.360e-8848.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLW4_ECTSI4.270e-8750.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNP7_ECTSI1.240e-7647.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN39_9PHAE1.650e-6444.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRW4_ECTSI2.290e-6344.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4DBT4_HETAK6.760e-4032.78Hypothetical protein n=8 Tax=Heterosigma akashiwo ... [more]
A0A6V1U7C3_HETAK8.240e-3932.25Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
K3WNM1_GLOUD2.990e-3833.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AM43_PLAHL8.860e-3230.94Serine threonine protein phosphatase 2a n=1 Tax=Pl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1421contigH-elongata_contig1421:13944..15207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.0
Seed ortholog evalue1e-74
Seed eggNOG ortholog2880.D7FLV2
EggNOG free text desc.cellular zinc ion homeostasis
EggNOG OGsCOG0428@1,KOG2693@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons3
Model size903
Cds size903
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1421.2911.1prot_H-elongata_contig1421.2911.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1421 13944..15207 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929844.0000646-CDS-H-elongata_contig1421:13943..142551622929844.0000646-CDS-H-elongata_contig1421:13943..14255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1421 13944..14255 -
1691679180.3383396-CDS-H-elongata_contig1421:13943..142551691679180.3383396-CDS-H-elongata_contig1421:13943..14255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1421 13944..14255 -
1622929844.0114682-CDS-H-elongata_contig1421:14553..147531622929844.0114682-CDS-H-elongata_contig1421:14553..14753Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1421 14554..14753 -
1691679180.3610957-CDS-H-elongata_contig1421:14553..147531691679180.3610957-CDS-H-elongata_contig1421:14553..14753Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1421 14554..14753 -
1622929844.0246952-CDS-H-elongata_contig1421:14816..152071622929844.0246952-CDS-H-elongata_contig1421:14816..15207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1421 14817..15207 -
1691679180.3733494-CDS-H-elongata_contig1421:14816..152071691679180.3733494-CDS-H-elongata_contig1421:14816..15207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1421 14817..15207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1421.2911.1

>prot_H-elongata_contig1421.2911.1 ID=prot_H-elongata_contig1421.2911.1|Name=mRNA_H-elongata_contig1421.2911.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp
AAGALLAASLLHIIPEALEGLESEFEDLHKVGIAAGVAILGGIFFGVVLH
AFLEVDHSHGPHSDQDHHAACVVSNEENRSTLVLRTTEHSEQDLLPAEAI
NQARMNGVVMGAEHADLSSTPPLSPLEGGVSLQPVCWNIIIGDLVHNFAD
GVTIGAAFLGCSSTIGWTVTASAVLHEIPHELADFMALINGGMSKMQAVL
FNFISALSAVLGVVLMLALRNTLTSADVAYILLIGGGSFIFIGLAELVPE
ALKVSHDAKRRTGFFPSMRKLLSFVIGASLIGIPLLFDEHCDDGESGHNH
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mRNA from alignment at H-elongata_contig1421:13944..15207-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1421.2911.1 ID=mRNA_H-elongata_contig1421.2911.1|Name=mRNA_H-elongata_contig1421.2911.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1264bp|location=Sequence derived from alignment at H-elongata_contig1421:13944..15207- (Himanthalia elongata Himel1 dioecious)
GCGGCCGGCGCACTTCTTGCCGCATCGCTATTGCACATAATTCCCGAGGC ACTTGAGGGTCTCGAGTCTGAGTTCGAAGACCTCCACAAGGTTGGCATCG CTGCCGGCGTCGCAATCCTCGGGGGCATCTTCTTCGGCGTCGTCCTGCAC GCCTTCCTGGAGGTTGACCACTCCCATGGACCTCACTCAGACCAGGACCA CCACGCTGCATGTGTAGTCAGTAACGAGGAAAATCGTTCTACCCTCGTCT TGAGAACGACAGAGCATTCCGAGCAAGATCTCCTGCCGGCGGAGGCGATC AACCAGGCCCGGATGAATGGAGTTGTGATGGGTGCGGAACACGCGGATCT CTCCAGCACGCCACCACTTTCTCCACTGGAAGGTGGCGTAAGTACGGAAA ATCTGCAGGGTCTGATGGATGCGAGAAGGGGTAAATCGCTCACGGATATG AAAGGTCTGCAGCCGGTGTGCTGGAACATCATAATAGGCGATCTTGTGCA CAACTTCGCCGACGGGGTCACAATCGGGGCGGCGTTCCTGGGGTGCAGCT CGACCATCGGCTGGACCGTGACCGCATCTGCCGTGCTCCACGAGATACCC CACGAGCTGGCCGACTTCATGGCGCTCATCAACGGGGGTATGAGCAAAAT GCAGGTGTGGATGGAAACTTGATAGATTACCTTTTCTTACTAGGATTATT TTTACATTATCATGATACGGATCATCACGCACTTGCTTCCCCCCCTCCCC CAAGGACTGTGGATTTGATCACCAATGTATAAAATATATCGTTGCTGCCT GGGCCTACAAACCATATATGTGGACAACTCAAACATTCTGCACACAACGA ATTGCTCGCCTTTCACGTGGAACCCTGTCAGTCTCTCCCTCCCTCTCTTT GGCCGTTGGAATTCACCCCCGTCGGCCCCGTATCTAAATTTCTTTGTCGC AGGCGGTTTTATTCAACTTCATATCTGCTCTTTCTGCGGTGTTGGGCGTG GTGCTCATGCTTGCATTGCGCAATACACTTACCTCAGCAGATGTTGCCTA CATACTGCTTATCGGAGGGGGGTCATTCATCTTCATCGGGCTCGCCGAGC TCGTCCCCGAAGCTCTGAAGGTCTCGCATGATGCGAAAAGGCGCACAGGG TTCTTTCCGTCGATGCGGAAGCTTTTGTCGTTCGTCATCGGGGCGTCCCT TATCGGTATACCACTTCTCTTTGACGAACACTGCGATGACGGGGAATCCG GACACAATCACTAG
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Coding sequence (CDS) from alignment at H-elongata_contig1421:13944..15207-

>mRNA_H-elongata_contig1421.2911.1 ID=mRNA_H-elongata_contig1421.2911.1|Name=mRNA_H-elongata_contig1421.2911.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1806bp|location=Sequence derived from alignment at H-elongata_contig1421:13944..15207- (Himanthalia elongata Himel1 dioecious)
GCGGCCGGCGCACTTCTTGCCGCATCGCTATTGCACATAATTCCCGAGGC
ACTTGAGGGTCTCGAGTCTGAGTTCGAAGACCTCCACAAGGTTGGCATCG
CTGCCGGCGTCGCAATCCTCGGGGGCATCTTCTTCGGCGTCGTCCTGCAC
GCCTTCCTGGAGGTTGACCACTCCCATGGACCTCACTCAGACCAGGACCA
CCACGCTGCATGTGTAGTCAGTAACGAGGAAAATCGTTCTACCCTCGTCT
TGAGAACGACAGAGCATTCCGAGCAAGATCTCCTGCCGGCGGAGGCGATC
AACCAGGCCCGGATGAATGGAGTTGTGATGGGTGCGGAACACGCGGATCT
CTCCAGCACGCCACCACTTTCTCCACTGGAAGGTGGCGTAAGCGGCCGGC
GCACTTCTTGCCGCATCGCTATTGCACATAATTCCCGAGGCACTTGAGGG
TCTCGAGTCTGAGTTCGAAGACCTCCACAAGGTTGGCATCGCTGCCGGCG
TCGCAATCCTCGGGGGCATCTTCTTCGGCGTCGTCCTGCACGCCTTCCTG
GAGGTTGACCACTCCCATGGACCTCACTCAGACCAGGACCACCACGCTGC
ATGTGTAGTCAGTAACGAGGAAAATCGTTCTACCCTCGTCTTGAGAACGA
CAGAGCATTCCGAGCAAGATCTCCTGCCGGCGGAGGCGATCAACCAGGCC
CGGATGAATGGAGTTGTGATGGGTGCGGAACACGCGGATCTCTCCAGCAC
GCCACCACTTTCTCCACTGGAAGGTGGCGTAAGTCTGCAGCCGGTGTGCT
GGAACATCATAATAGGCGATCTTGTGCACAACTTCGCCGACGGGGTCACA
ATCGGGGCGGCGTTCCTGGGGTGCAGCTCGACCATCGGCTGGACCGTGAC
CGCATCTGCCGTGCTCCACGAGATACCCCACGAGCTGGCCGACTTCATGG
CGCTCATCAACGGGGGTATGAGCAAAATGCAGGTCTGCAGCCGGTGTGCT
GGAACATCATAATAGGCGATCTTGTGCACAACTTCGCCGACGGGGTCACA
ATCGGGGCGGCGTTCCTGGGGTGCAGCTCGACCATCGGCTGGACCGTGAC
CGCATCTGCCGTGCTCCACGAGATACCCCACGAGCTGGCCGACTTCATGG
CGCTCATCAACGGGGGTATGAGCAAAATGCAGGCGGTTTTATTCAACTTC
ATATCTGCTCTTTCTGCGGTGTTGGGCGTGGTGCTCATGCTTGCATTGCG
CAATACACTTACCTCAGCAGATGTTGCCTACATACTGCTTATCGGAGGGG
GGTCATTCATCTTCATCGGGCTCGCCGAGCTCGTCCCCGAAGCTCTGAAG
GTCTCGCATGATGCGAAAAGGCGCACAGGGTTCTTTCCGTCGATGCGGAA
GCTTTTGTCGTTCGTCATCGGGGCGTCCCTTATCGGTATACCACTTCTCT
TTGACGAACACTGCGATGACGGGGAATCCGGACACAATCACTAGGCGGTT
TTATTCAACTTCATATCTGCTCTTTCTGCGGTGTTGGGCGTGGTGCTCAT
GCTTGCATTGCGCAATACACTTACCTCAGCAGATGTTGCCTACATACTGC
TTATCGGAGGGGGGTCATTCATCTTCATCGGGCTCGCCGAGCTCGTCCCC
GAAGCTCTGAAGGTCTCGCATGATGCGAAAAGGCGCACAGGGTTCTTTCC
GTCGATGCGGAAGCTTTTGTCGTTCGTCATCGGGGCGTCCCTTATCGGTA
TACCACTTCTCTTTGACGAACACTGCGATGACGGGGAATCCGGACACAAT
CACTAG
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