mRNA_H-elongata_contig14143.2875.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14143.2875.1
Unique NamemRNA_H-elongata_contig14143.2875.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: D7FGS4_ECTSI (PBPe domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS4_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 1.360e-159
Identity = 240/398 (60.30%), Postives = 291/398 (73.12%), Query Frame = 1
Query:   13 MMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASLDPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEGFSTESCPFNPGGLWEGGELIRDAALTTDIVGVTGRVTFIQGSKVVTNGFGEAGSGWRPVNGTTFCAMNLRAHASLGGTFATVRSWMPKQWEDVNGTAA 1206
            M+SSQASLLET+SNDFFGLPM+TP+A+ ARA TYFS+G        SYL G+QPDVF EM ALARLILDMK ERD +RGWY + E+VS++Y+DDT+G +A S F RAV+ T G+NI   A G +P++IE++   P++T  GTDYRP L  L EDRASI+VLL+EGYD  F RSV  QA EVGL NE VQWY++G  AMDGIF+ N+++HDSQLAYD RG LGVRAC   +G+G E + NLTSRW +LD D YPGAG   LTP GR+DPLLA+AYDA F LA+A+ +VQ TA  W   LEGF T        GLW+ G  IR+AAL T+IVGVTG V F + +  VT+G G AGSGWR  NGT FCA+NL+AHASLG TF     W P+ + D NGT A
Sbjct:    1 MLSSQASLLETVSNDFFGLPMVTPSASAARANTYFSSGAYGLGGKGSYLFGVQPDVFSEMEALARLILDMKVERDLDRGWYRTTERVSMIYSDDTYGAVAASAFVRAVRRTEGMNIDSTAAGEMPSSIELAKSEPVNTILGTDYRPTLSALVEDRASIVVLLSEGYDGTFVRSVLEQALEVGLANEDVQWYLSGASAMDGIFSHNESYHDSQLAYDFRGMLGVRACPAIQGSGSEALANLTSRWEALDSDKYPGAGIGTLTPGGRLDPLLAYAYDAAFVLATAVAAVQSTAADWGGVLEGFVTGKAA----GLWQDGAFIREAALGTEIVGVTGPVAFRESASTVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFEATMLWRPETFVDTNGTLA 394          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: D7FGS3_ECTSI (PBPe domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS3_ECTSI)

HSP 1 Score: 480 bits (1236), Expect = 7.140e-158
Identity = 244/394 (61.93%), Postives = 292/394 (74.11%), Query Frame = 1
Query:   28 ASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGE-SYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASLDPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEGFSTESCPFNPGGLWEGGELIRDAALTTDIVGVTGRVTFIQGSKVVTNGFGEAGSGWRPVNGTTFCAMNLRAHASLGGTFATVRSWMPKQWEDVNGTAA 1206
            ASLLET+SNDFFGLPM+TP+A+ ARA TYFS+G +  L GE SYL G+QPDVF EM ALARLILDMK ERD +RGWY + E+VS++Y DDT+G +A S F RAV+ T GINI  NA G +P+++E++   P+D   GTDYRP L  L ED ASI+V L+EGYD  F RSV  QA EVGL NE VQWY++G  AMDGIF+ N+++HDSQLAYD RG LGVRAC   KG+G E + NLTSRWA+LD D YPGAG   LTP GR+DPLLA+AYDAVF LA+A+ +VQ TAT W   LEGF T        GLW+ G  IR+AAL T+IVGVTG V F + +  VT+G G AGSGWR  NGT FCA+NL+AHASLG TFAT   W P+ + D NGT A
Sbjct:   61 ASLLETVSNDFFGLPMVTPSASAARANTYFSSG-AYGLGGEGSYLFGVQPDVFSEMEALARLILDMKVERDLDRGWYRTTERVSMIYPDDTYGAVAASAFVRAVRGTEGINIDSNAAGEMPSSMELAKSEPVDPILGTDYRPTLSALVEDHASIVVFLSEGYDGAFVRSVLEQALEVGLANEDVQWYLSGPSAMDGIFSHNESYHDSQLAYDFRGMLGVRACPAIKGSGSEALANLTSRWAALDSDKYPGAGFGTLTPGGRLDPLLAYAYDAVFVLAAAVATVQSTATDWGGVLEGFVTGKSA----GLWQDGAFIREAALGTEIVGVTGPVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPETFVDSNGTLA 449          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: D7G1B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.030e-41
Identity = 124/385 (32.21%), Postives = 177/385 (45.97%), Query Frame = 1
Query:   43 TISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNA-----------LGLLPATIEISSITPLDTEEGTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASLDPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEGFSTESCPFNPGGLWEGGELIRDAALTTD--IVGVTGRVTFIQGSKVVTNGFGEAGSGWRPVNGTTFCAMNLRAHASLGGTFATV 1158
            ++SN++  LP+++ A T ARAE+   T          YLL  QP V  +M  L RLILDMK  RD   G   + E+V +++  DTFG +A + F+ A   T+ + +   +                 T+E++    +     T +   L  L ++ ASIIVLLAEG+D    R+V +QA E GL  E VQWY+    A D +F  N T+ D+ LA+D+RG LGVRACTP  G   ++                                          TLA+  GS           L+G + +SCPF   G W  G L+RD+ L+    +VG TG +    G  V     GE   G R  +  TFCA+NL+  A+ G  F  +
Sbjct:    3 SLSNEYLDLPLMSVAGTAARAESRNETE-------GGYLLHTQPGVVPQMQVLVRLILDMKLARDAVDGRSETTERVWLVHTSDTFGTIATAAFNAAAT-TISVALPDTSDXXXXXXXXXXXXXXXXTVEVAGTVVIAASSETMFDSELATLVDNEASIIVLLAEGFDGAIIRTVLSQANEAGLT-EGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGKMAQDT----------------------------------------LTLANVNGSG----------LQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPL----GMSV-----GEDDDG-RDADTVTFCAVNLKPDATHGARFEVI 318          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: A0A6H5J962_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J962_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 3.740e-33
Identity = 89/247 (36.03%), Postives = 124/247 (50.20%), Query Frame = 1
Query:   43 TISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERG------------------WYHSEEQVSVLYADDTFGNLAVSGFSRA-------VKNTVGINIGFNALGLLP-ATIEISSITPLDTEEGTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPTKG 705
            ++SN++  LP+++ A T ARAE+   T          YLL  QP V  +M AL RLILDMK  RD   G                     + E+V +++  DTFG +A + F+ A       + NT         +G    AT+E++    +       +   L  L ++ ASIIVLLAE +D    R+V +QA E GL  E VQWY+    A D +F  N T+ D+ LA+D+RG LGVRACTP  G
Sbjct:    3 SLSNEYLDLPLMSVAGTAARAESRNETE-------GGYLLHTQPGVVPQMQALVRLILDMKLARDAVDGRREGGGAEARERERNPLLLSETTERVWLVHTSDTFGTIATAAFNNAATTISVALPNTSDXXXXXXXIGEEERATVEVAGTVVIAASSEAMFDSELATLVDNEASIIVLLAEAFDGAIVRTVLSQANEAGLT-EGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTG 241          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: A0A3M1UXT3_9EURY (ANF_receptor domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1UXT3_9EURY)

HSP 1 Score: 70.5 bits (171), Expect = 1.820e-9
Identity = 72/298 (24.16%), Postives = 116/298 (38.93%), Query Frame = 1
Query:  319 GFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEE----GTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASLDPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEGFSTESCPFNPGGLWEGGELIRDAALTTDIVGVTGRVTFIQGSKVVTNGFGEAGSGWRPVNGTTFCAMNLRAHASLGGTFATVRSWMPKQWEDVNGT 1200
            GF++        + G   + ++  T     I  L ++       D +  L  + +  A +IVL A   DA   ++VF+QA +VGLV E   W  T G   + +F  +    D+++   ++G +G  A     G G+E+  ++         D Y G G      D   +    FAYDAV+  A A+  +                       G  +  G+L+      +D VG TGRVTF        N FG+  +         +  +NL+     G +F  V SW       + GT
Sbjct:  244 GFTQIATLATSDDYGLGGITVVEETAREEGIEILSSQRFDQGAVDVKSQLQAIKDSGAHVIVLNAIVGDA---KTVFSQADDVGLVGEDYVWIGTDGPTQEAVFENDDGTVDTEIKDAMQGMIGT-APNRGSGPGYEKFLDIWESCNGKTSDDYTGCG------DRTPNTFATFAYDAVYAFAYALDRM--------------------IKAGKDYTDGDLLLAELKKSDFVGATGRVTF--------NEFGDRNA--------LYDILNLQ-----GDSFKVVGSWSETDGMSITGT 490          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: UPI00125D3F92 (glutamate receptor 3.6-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D3F92)

HSP 1 Score: 65.9 bits (159), Expect = 7.430e-8
Identity = 82/353 (23.23%), Postives = 144/353 (40.79%), Query Frame = 1
Query:    1 VIGPMMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTD-YRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPT---KGAGFEEINNLTSRWASLDPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAI-------GSVQFTATRWNNFLEGFSTESCPFNPGGLWEGGELIRDAALTTDIVGVTGRVTF 1026
            +IGP  S  A ++  I+N+   +P+++ AAT           +S   +   + +   P+   +M A+A +I             Y+   +V  +Y DD +G   ++  +                 L      IS   PL  E   D  R  LI ++   + I+V+     + +   ++F+ A+ +G++     W  T  H +  +   N       + + ++G L +R  TP    K   F   +NLT R A+         GT GL+  G       +AYD V+ LA A+       G + F+        EG        +   +++GG+L+RD  L T++ GVTG + F
Sbjct:  100 IIGPQSSGIAHVISNIANEL-QVPLLSFAAT--------DPALSSLQY--PFFVRTSPNDLFQMAAIASMID------------YYEWREVIAIYVDDDYGRNGIAALADQ---------------LAMKRCRISYKAPLKPEATIDDMRDVLIQVALTESRILVVHTYPSEGL---AIFSVAKYLGMIQGGYVWIAT--HWLSTVLDTNTRLSTDVVEHHIQGALTLRIYTPESRLKREFFSRWSNLTKRLANN--------GTFGLSTLGL------YAYDTVWLLAHALDAFFKQGGKISFSKDPRLTSEEGGGLH---LDSMSIFDGGKLLRDIILMTNVTGVTGLLKF 392          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: A0A1D1XVY8_9ARAE (Glutamate receptor n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XVY8_9ARAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.730e-7
Identity = 88/353 (24.93%), Postives = 152/353 (43.06%), Query Frame = 1
Query:    1 VIGPMMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASL---DPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEGFSTESCPFNPGG--------LWEGGELIRDAALTTDIVGVTGRVTF 1026
            +IGP  S  A ++  ++N+   +P+++ +AT     +         L    ++   Q D+F+ MTA+A ++             Y++ +QV  +Y DD +G   ++     + +     I + A   LP     S IT L           LI ++   + IIVL A   D+  A  VF+ A  +G++     W  T   A    +    T  D ++   ++G L +R  T    A  +  N+L SRW +L   +   Y G  + GL           +AYD V+ +A A+ S        +     FS +S   + GG        +++GG+L+ D  + T+I+GVTG + F
Sbjct:  123 IIGPQSSVIAHVISHVANELH-VPLVSFSATDPTLNS---------LQYPFFVRTTQSDLFQ-MTAIAEIVD------------YYNWKQVIAIYTDDDYGRNGIAALGDKLDDR-RCKISYKAA--LPPGATRSDITDL-----------LIKVALMESRIIVLHA--LDSGLA--VFSVAHYLGMLGNGYVWIATDWLAS---YLDTYTPLDYEIINTMQGVLTLRQHT----ADSKRKNDLLSRWRNLVKKETGGYFGLNSYGL-----------YAYDTVWMIAHAVDSFLNDGGTIS-----FSNDSRLTDTGGTLHLEALTMFDGGKLLLDKIMKTNIIGVTGPLVF 411          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: A0A843VSI2_COLES (Glutamate receptor n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VSI2_COLES)

HSP 1 Score: 64.7 bits (156), Expect = 1.740e-7
Identity = 89/355 (25.07%), Postives = 150/355 (42.25%), Query Frame = 1
Query:    1 VIGPMMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTDYRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIFAVNQTHH--DSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASL---DPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAI-------GSVQFTA-TRWNNFLEGFSTESCPFNPGGLWEGGELIRDAALTTDIVGVTGRVTF 1026
            VIGP  S  A  +  ++N+   +P+++ AAT     +         L    ++   Q D+F+ M A+A +I             Y+  +QV  +Y DD +G   +      + N     I + A   LP       IT L           L+ ++     +IVL    +  V   +VF+ A+ +G++     W+ T     D +  +  T    DS+L   ++G + +R  T    A     N+L SRW+ L   +   Y G  T GL           +AYD V+ +A AI       G + F+  +R N+  +G    +       +++GG+L+ D  L T+I GVTG ++F
Sbjct:  141 VIGPQSSVVAHAISHVANEL-NVPLVSFAATDPTLNS---------LQYPFFVRSTQSDLFQ-MVAIADVID------------YYQWKQVIAIYTDDDYGRNGIDSLGDKL-NERRCKISYKAA--LPPEATRIDITNL-----------LVKVALMEPRVIVL----HSPVAGAAVFSVAQYLGMLGNGYVWFAT-----DWLSTILDTSVPLDSELMNTIQGVISLRQHT----ADSTRKNDLLSRWSKLTKKETGGYFGLNTYGL-----------YAYDTVWIVAHAIDAFLNDGGIISFSNDSRLNDRDKG----TLHLGAMTMFDGGKLLLDKILKTNITGVTGPLSF 430          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: UPI00125D8EE8 (glutamate receptor 3.3-like isoform X4 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D8EE8)

HSP 1 Score: 60.8 bits (146), Expect = 2.580e-6
Identity = 91/378 (24.07%), Postives = 149/378 (39.42%), Query Frame = 1
Query:    1 VIGPMMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTD-YRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIF-AVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASL----DPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEG----FSTESCPFNPGGL--WEGGELIRDAALTTDIVGVTGRVTFIQGSKVVTNGF---GEAGSGWRPV 1089
            +IGP  S  A  +  I+N+   +P+++ +AT           +S   +   + +   P+   +M A+A ++             Y+  + V  +Y DD +G   ++  +                 L     +IS   PL      +  R  L  L+   + IIV+    Y  +    +F+QA+ +G+      W  T  H +  I   V     D  +  +L+GT+ +R   P      EE     SRW+ L    D +   G  T GL           +AYD V+ LA A+ +          F +G    FS +   FNP  +  ++GG+L+ D  L T+I GVTG   F    ++    F      GSG R V
Sbjct:  138 IIGPQSSVIAHAISHIANEIH-VPLLSFSAT--------DPALSPLQY--PFFVRTSPNDMFQMAAIASIVE------------YYHWKAVIAIYVDDEYGRSGIAALADQ---------------LAMRRCQISCKAPLKPRATLEEVRDTLTQLALTESRIIVVHTYPYRGL---DIFSQAKSLGMTESGYVWIAT--HWLSTIIDTVGPLSPD--VMDNLQGTITLRTYVPDS----EEKRKFVSRWSDLAKRIDTNSSLGMCTYGL-----------YAYDTVWLLARALDAF---------FKQGGNISFSIDRADFNPYSINVFDGGKLLLDNILKTNITGVTGLFKFTSDRELYRPAFEVINVIGSGMRRV 446          
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Match: UPI00125D37EF (glutamate receptor 3.6-like isoform X1 n=3 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D37EF)

HSP 1 Score: 60.8 bits (146), Expect = 2.840e-6
Identity = 91/378 (24.07%), Postives = 149/378 (39.42%), Query Frame = 1
Query:    1 VIGPMMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLLGLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLAVSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTD-YRPALINLSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDGIF-AVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASL----DPDVYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEG----FSTESCPFNPGGL--WEGGELIRDAALTTDIVGVTGRVTFIQGSKVVTNGF---GEAGSGWRPV 1089
            +IGP  S  A  +  I+N+   +P+++ +AT           +S   +   + +   P+   +M A+A ++             Y+  + V  +Y DD +G   ++  +                 L     +IS   PL      +  R  L  L+   + IIV+    Y  +    +F+QA+ +G+      W  T  H +  I   V     D  +  +L+GT+ +R   P      EE     SRW+ L    D +   G  T GL           +AYD V+ LA A+ +          F +G    FS +   FNP  +  ++GG+L+ D  L T+I GVTG   F    ++    F      GSG R V
Sbjct:  138 IIGPQSSVIAHAISHIANEIH-VPLLSFSAT--------DPALSPLQY--PFFVRTSPNDMFQMAAIASIVE------------YYHWKAVIAIYVDDEYGRSGIAALADQ---------------LAMRRCQISCKAPLKPRATLEEVRDTLTQLALTESRIIVVHTYPYRGL---DIFSQAKSLGMTESGYVWIAT--HWLSTIIDTVGPLSPD--VMDNLQGTITLRTYVPDS----EEKRKFVSRWSDLAKRIDTNSSLGMCTYGL-----------YAYDTVWLLARALDAF---------FKQGGNISFSIDRADFNPYSINVFDGGKLLLDNILKTNITGVTGLFKFTSDRELYRPAFEVINVIGSGMRRV 446          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14143.2875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FGS4_ECTSI1.360e-15960.30PBPe domain-containing protein n=2 Tax=Ectocarpus ... [more]
D7FGS3_ECTSI7.140e-15861.93PBPe domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G1B0_ECTSI1.030e-4132.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J962_9PHAE3.740e-3336.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M1UXT3_9EURY1.820e-924.16ANF_receptor domain-containing protein n=1 Tax=Eur... [more]
UPI00125D3F927.430e-823.23glutamate receptor 3.6-like n=1 Tax=Ipomoea trilob... [more]
A0A1D1XVY8_9ARAE1.730e-724.93Glutamate receptor n=1 Tax=Anthurium amnicola TaxI... [more]
A0A843VSI2_COLES1.740e-725.07Glutamate receptor n=1 Tax=Colocasia esculenta Tax... [more]
UPI00125D8EE82.580e-624.07glutamate receptor 3.3-like isoform X4 n=1 Tax=Ipo... [more]
UPI00125D37EF2.840e-624.07glutamate receptor 3.6-like isoform X1 n=3 Tax=Ipo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14143contigH-elongata_contig14143:4825..7824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.4
Seed ortholog evalue1e-133
Seed eggNOG ortholog2880.D7FGS3
EggNOG free text desc.NMDA glutamate receptor activity
EggNOG OGsKOG4440@1,KOG4440@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1206
Cds size1194
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929841.0338492-UTR-H-elongata_contig14143:4824..48361622929841.0338492-UTR-H-elongata_contig14143:4824..4836Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14143 4825..4836 +
1691679179.1499732-UTR-H-elongata_contig14143:4824..48361691679179.1499732-UTR-H-elongata_contig14143:4824..4836Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14143 4825..4836 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929841.0463045-CDS-H-elongata_contig14143:4836..50751622929841.0463045-CDS-H-elongata_contig14143:4836..5075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 4837..5075 +
1691679179.162598-CDS-H-elongata_contig14143:4836..50751691679179.162598-CDS-H-elongata_contig14143:4836..5075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 4837..5075 +
1622929841.0563207-CDS-H-elongata_contig14143:5248..54071622929841.0563207-CDS-H-elongata_contig14143:5248..5407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 5249..5407 +
1691679179.1822817-CDS-H-elongata_contig14143:5248..54071691679179.1822817-CDS-H-elongata_contig14143:5248..5407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 5249..5407 +
1622929841.0699692-CDS-H-elongata_contig14143:6238..63711622929841.0699692-CDS-H-elongata_contig14143:6238..6371Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 6239..6371 +
1691679179.1935802-CDS-H-elongata_contig14143:6238..63711691679179.1935802-CDS-H-elongata_contig14143:6238..6371Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 6239..6371 +
1622929841.0817902-CDS-H-elongata_contig14143:6668..68281622929841.0817902-CDS-H-elongata_contig14143:6668..6828Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 6669..6828 +
1691679179.2026608-CDS-H-elongata_contig14143:6668..68281691679179.2026608-CDS-H-elongata_contig14143:6668..6828Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 6669..6828 +
1622929841.198592-CDS-H-elongata_contig14143:7054..72771622929841.198592-CDS-H-elongata_contig14143:7054..7277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 7055..7277 +
1691679179.2133257-CDS-H-elongata_contig14143:7054..72771691679179.2133257-CDS-H-elongata_contig14143:7054..7277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 7055..7277 +
1622929841.2134395-CDS-H-elongata_contig14143:7544..78241622929841.2134395-CDS-H-elongata_contig14143:7544..7824Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 7545..7824 +
1691679179.2205744-CDS-H-elongata_contig14143:7544..78241691679179.2205744-CDS-H-elongata_contig14143:7544..7824Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14143 7545..7824 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14143.2875.1prot_H-elongata_contig14143.2875.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14143 4837..7824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14143.2875.1

>prot_H-elongata_contig14143.2875.1 ID=prot_H-elongata_contig14143.2875.1|Name=mRNA_H-elongata_contig14143.2875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=398bp
MMSSQASLLETISNDFFGLPMITPAATGARAETYFSTGVSEALWGESYLL
GLQPDVFEEMTALARLILDMKTERDTERGWYHSEEQVSVLYADDTFGNLA
VSGFSRAVKNTVGINIGFNALGLLPATIEISSITPLDTEEGTDYRPALIN
LSEDRASIIVLLAEGYDAVFARSVFTQAREVGLVNETVQWYVTGGHAMDG
IFAVNQTHHDSQLAYDLRGTLGVRACTPTKGAGFEEINNLTSRWASLDPD
VYPGAGTSGLTPDGRMDPLLAFAYDAVFTLASAIGSVQFTATRWNNFLEG
FSTESCPFNPGGLWEGGELIRDAALTTDIVGVTGRVTFIQGSKVVTNGFG
EAGSGWRPVNGTTFCAMNLRAHASLGGTFATVRSWMPKQWEDVNGTAA
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mRNA from alignment at H-elongata_contig14143:4825..7824+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14143.2875.1 ID=mRNA_H-elongata_contig14143.2875.1|Name=mRNA_H-elongata_contig14143.2875.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3000bp|location=Sequence derived from alignment at H-elongata_contig14143:4825..7824+ (Himanthalia elongata Himel1 dioecious)
GTTATCGGCCCGATGATGTCTTCGCAGGCATCCTTGCTTGAGACGATTTC CAACGACTTCTTCGGCTTACCCATGATCACGCCTGCCGCAACCGGGGCCC GCGCGGAGACATACTTCTCGACGGGAGTGTCTGAGGCGTTATGGGGTGAG AGCTACCTGCTAGGTCTCCAGCCAGACGTTTTTGAGGAAATGACCGCCTT GGCGAGACTGATCCTGGACATGAAGACCGAACGGGATACAGAGCGTGGAT GGTGAGAGGCAACGAGAGGGATGTGTGGATGCTTCGCCTCAATTTTAACC TACGTCCTTTTGCTTTTTACACACATGTCGTCGATTTATCGTCTTTGAAC ATGTATGAACCCGGCGCGAGGAACACTATTCCCGTCATGGCTGTATCCAC CCGTCTGTACAAACTCAATCCCAGGTATCACAGCGAAGAACAAGTCTCAG TTCTTTACGCGGATGATACCTTCGGTAATCTTGCGGTATCGGGGTTCTCT CGCGCCGTGAAGAACACAGTCGGCATCAATATAGGATTCAACGCTTTGGG CCTACTGCCAGCAACTATCGAGATATCCTCCATGTGAGGAGTGACGTACG GGGAGCGTGGTGCTTGCCCTGCTTTTTTCTCGGGGTGACGTGTTAATTTT GCTTCGGCGAGCAGGTATTCCGAGTGAGCTGTGTGTGTGTGTGTGTGTGT TTGTCATCCCATTTATTCTGGACGTCAGACTTGTGGAGGCATGCACCAGC CGGGGTAGGGTCACACAGGAGGACAGTCACACAGGATTTCTCCACCTTCC TTCTGCGATGTTGCCTTAATTTTTTATCGCGAGAAGGATTCAGCCGCCCC TTTCCCTCCTCGATCGTGAAGTCGAATTTTGGCGTACCCACGAAATAATC GTTATCCACTTGTTGGGCATGATATGAAAGAAGATCTCGGTTCGTGTGAC AGCGCCGAGATTCGAACTCACGTCCTAAGGTCAGAAGGTTTGAAGGTCAC CAACTGAAATCACCGGGGCGGAAATACAGACAATCGAATTCTCGCACACA GCACTATCCGGTGGCGTGTAGACGCAAACGCTGGTGGTTTAGAAAACATC GATGTTGCGTGGTGAAGCTCACCAGACTGTAAGCGCATTAGCAGGGGTCA TGAGCATGTGCCAGTTGTCTACTTTGCCGCCCGCAACGCGAAAAATATTG TTTGGTTATCCTTCCGACGGACGGACGGAAGGGTATTGTGACGTTCACCT AGGTGCACAATCCTGTGCGTCAAAATAGGAGGTGTAAGACAAAAATACCA GTACAAACTAGACCCGAAGACTGCCGAATAAAAATGCCCCCGTTAAGCGA CGATCTGTTGAAGCCTAATCATCGGAGCGTCTACCAATTCCTGGGAATAC AAATGTCGCCAAAGCACCCCGCTGGATACTGAGGAGGGAACTGACTATCG CCCGGCGCTGATCAACTTGTCGGAAGATCGTGCCTCAATTATCGTCCTTC TTGCGGAAGGCTACGACGCCGTGTTCGCACGATCGGTTTTCACGCAGGTA GGGGTGTCAATAGAGGAGAAGCCTCAACTTGTCTACGCCTGGCAATTTTG GCATGCTCCTTAGAGTGAGAACGAAGGCACGAATAGGCTCTCGTGTGTTT TACACGGGAATTATAGACTCGGAGAAAGAAAGTGCTGACACCGGAAACGT GTGGATCAGACAAGCGTACATTTGTCGCCGCAGTCATTTACCGTGAACTG TCTTTACCTTTTTTTGTTTCACGGCCACATTAGACGCTACGTCGTCTACG AATGGTACATTTCTCTGTGTCGTTCAAATTTCGAGCACGTACAGGCTCGA GAGGTGGGGCTCGTGAACGAAACCGTCCAGTGGTACGTGACCGGTGGGCA TGCTATGGACGGGATCTTCGCCGTGAACCAGACGCACCACGACTCACAGC TCGCCTACGACCTTAGGGGTACTCTTGGCGTCCGAGCCTGCACTCCAACA AAAGGTAAAAATACCGAGAATGTTGCCGTTCTTGATGAACTCGCTACCAT GGTGCCCAAGAACACACGCGTGAAAACAACACATGCTTATTAAGTGTGAG TACTGTTGTAGACTCAATTGATCACCCGATCGATCGCGCCGAGGCGTCCT CGTTGATGCGCGAGACTGTTACATACCGTAACGCTGGAGGGGGCTTTCAT TATATTTCTTCCGAAAAATGGGTCACCCAGGCGCTGGATTCGAGGAAATC AACAATCTTACCTCCAGGTGGGCCTCGTTAGATCCCGACGTTTACCCGGG GGCGGGCACCAGTGGTCTAACACCGGACGGACGAATGGACCCACTGCTGG CCTTCGCCTACGACGCAGTATTCACGCTAGCGAGCGCGATTGGATCGGTG CAATTTACAGCCACGAGATGGAATAACTTTCTCGAAGGGTTTTCGACAGA AAGGTGCGAGAGTTCAAGGGAGATGTGCAAGGGGGGCAAGCCTTGTTTGT TTATCTTCTGCAGAGAATAGAAGCACTTTTGTGTTGATTTTCTCCTCCGA CTGTCTCGGCGCTAATTGTGGAGAAAGCCTCCTTCTTTCAAAAACGTTCG GTATACATTGCCGACTGTGAGAACCTATCCAGAACATTATCACCCGTTAA ATGCGATAAAAGATGGCCAGGCCCAAGAATACAATGCTCACAGTTAAGGA CCCATTCCGTCCGCGTACAGCTGCCCTTTCAACCCCGGCGGGCTGTGGGA AGGAGGTGAGCTCATCCGTGACGCCGCCCTCACCACCGACATTGTTGGCG TCACGGGCCGGGTCACCTTCATCCAAGGCAGTAAGGTGGTCACTAACGGG TTCGGAGAGGCCGGGTCCGGGTGGCGGCCGGTGAACGGGACGACGTTTTG CGCGATGAACCTGCGGGCGCATGCTTCTCTCGGGGGAACCTTCGCGACTG TGAGATCGTGGATGCCCAAGCAATGGGAAGACGTCAATGGCACAGCAGCG
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Coding sequence (CDS) from alignment at H-elongata_contig14143:4825..7824+

>mRNA_H-elongata_contig14143.2875.1 ID=mRNA_H-elongata_contig14143.2875.1|Name=mRNA_H-elongata_contig14143.2875.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2388bp|location=Sequence derived from alignment at H-elongata_contig14143:4825..7824+ (Himanthalia elongata Himel1 dioecious)
ATGATGTCTTCGCAGGCATCCTTGCTTGAGACGATTTCCAACGACTTCTT
CGGCTTACCCATGATCACGCCTGCCGCAACCGGGGCCCGCGCGGAGACAT
ACTTCTCGACGGGAGTGTCTGAGGCGTTATGGGGTGAGAGCTACCTGCTA
GGTCTCCAGCCAGACGTTTTTGAGGAAATGACCGCCTTGGCGAGACTGAT
CCTGGACATGAAGACCGAACGGGATACAGAGCGTGGATGATGATGTCTTC
GCAGGCATCCTTGCTTGAGACGATTTCCAACGACTTCTTCGGCTTACCCA
TGATCACGCCTGCCGCAACCGGGGCCCGCGCGGAGACATACTTCTCGACG
GGAGTGTCTGAGGCGTTATGGGGTGAGAGCTACCTGCTAGGTCTCCAGCC
AGACGTTTTTGAGGAAATGACCGCCTTGGCGAGACTGATCCTGGACATGA
AGACCGAACGGGATACAGAGCGTGGATGGTATCACAGCGAAGAACAAGTC
TCAGTTCTTTACGCGGATGATACCTTCGGTAATCTTGCGGTATCGGGGTT
CTCTCGCGCCGTGAAGAACACAGTCGGCATCAATATAGGATTCAACGCTT
TGGGCCTACTGCCAGCAACTATCGAGATATCCTCCATGTATCACAGCGAA
GAACAAGTCTCAGTTCTTTACGCGGATGATACCTTCGGTAATCTTGCGGT
ATCGGGGTTCTCTCGCGCCGTGAAGAACACAGTCGGCATCAATATAGGAT
TCAACGCTTTGGGCCTACTGCCAGCAACTATCGAGATATCCTCCATCACC
CCGCTGGATACTGAGGAGGGAACTGACTATCGCCCGGCGCTGATCAACTT
GTCGGAAGATCGTGCCTCAATTATCGTCCTTCTTGCGGAAGGCTACGACG
CCGTGTTCGCACGATCGGTTTTCACGCAGCACCCCGCTGGATACTGAGGA
GGGAACTGACTATCGCCCGGCGCTGATCAACTTGTCGGAAGATCGTGCCT
CAATTATCGTCCTTCTTGCGGAAGGCTACGACGCCGTGTTCGCACGATCG
GTTTTCACGCAGGCTCGAGAGGTGGGGCTCGTGAACGAAACCGTCCAGTG
GTACGTGACCGGTGGGCATGCTATGGACGGGATCTTCGCCGTGAACCAGA
CGCACCACGACTCACAGCTCGCCTACGACCTTAGGGGTACTCTTGGCGTC
CGAGCCTGCACTCCAACAAAAGGCTCGAGAGGTGGGGCTCGTGAACGAAA
CCGTCCAGTGGTACGTGACCGGTGGGCATGCTATGGACGGGATCTTCGCC
GTGAACCAGACGCACCACGACTCACAGCTCGCCTACGACCTTAGGGGTAC
TCTTGGCGTCCGAGCCTGCACTCCAACAAAAGGCGCTGGATTCGAGGAAA
TCAACAATCTTACCTCCAGGTGGGCCTCGTTAGATCCCGACGTTTACCCG
GGGGCGGGCACCAGTGGTCTAACACCGGACGGACGAATGGACCCACTGCT
GGCCTTCGCCTACGACGCAGTATTCACGCTAGCGAGCGCGATTGGATCGG
TGCAATTTACAGCCACGAGATGGAATAACTTTCTCGAAGGGTTTTCGACA
GAAAGGCGCTGGATTCGAGGAAATCAACAATCTTACCTCCAGGTGGGCCT
CGTTAGATCCCGACGTTTACCCGGGGGCGGGCACCAGTGGTCTAACACCG
GACGGACGAATGGACCCACTGCTGGCCTTCGCCTACGACGCAGTATTCAC
GCTAGCGAGCGCGATTGGATCGGTGCAATTTACAGCCACGAGATGGAATA
ACTTTCTCGAAGGGTTTTCGACAGAAAGCTGCCCTTTCAACCCCGGCGGG
CTGTGGGAAGGAGGTGAGCTCATCCGTGACGCCGCCCTCACCACCGACAT
TGTTGGCGTCACGGGCCGGGTCACCTTCATCCAAGGCAGTAAGGTGGTCA
CTAACGGGTTCGGAGAGGCCGGGTCCGGGTGGCGGCCGGTGAACGGGACG
ACGTTTTGCGCGATGAACCTGCGGGCGCATGCTTCTCTCGGGGGAACCTT
CGCGACTGTGAGATCGTGGATGCCCAAGCAATGGGAAGACGTCAATGGCA
CAGCAGCGCTGCCCTTTCAACCCCGGCGGGCTGTGGGAAGGAGGTGAGCT
CATCCGTGACGCCGCCCTCACCACCGACATTGTTGGCGTCACGGGCCGGG
TCACCTTCATCCAAGGCAGTAAGGTGGTCACTAACGGGTTCGGAGAGGCC
GGGTCCGGGTGGCGGCCGGTGAACGGGACGACGTTTTGCGCGATGAACCT
GCGGGCGCATGCTTCTCTCGGGGGAACCTTCGCGACTGTGAGATCGTGGA
TGCCCAAGCAATGGGAAGACGTCAATGGCACAGCAGCG
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