mRNA_H-elongata_contig141321.2865.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.890e-46 Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 1 QASTYIKMCEVDKEGTKVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIVE 270
+ ST IKM E DKEG KVY+ PL+WWRVRC DFPHLANLARR+LAIPATQ ESERLFSCAGNIVTKNRN L+PTT+ELLVLLRHSWKIVE
Sbjct: 202 KVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 114 bits (285), Expect = 9.830e-30 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 1
Query: 91 TDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIVE 270
TDFPHLANLARR+LAIPATQ +SERLFSCAGNIVTKNRN L+PTT+ELLVLLRHSWKIVE
Sbjct: 152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 211
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: U9U296_RHIID (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9U296_RHIID) HSP 1 Score: 79.0 bits (193), Expect = 2.700e-16 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 64 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 267
PL WW+ T FP L+ LAR+ LAIPAT T SERLFS AGN++T R +L+P +E LV + +W++V
Sbjct: 116 PLTWWKTNKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNWRLV 183
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: U9TMC6_RHIID (Uncharacterized protein (Fragment) n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TMC6_RHIID) HSP 1 Score: 75.5 bits (184), Expect = 2.800e-16 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 67 LNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSW 258
L WWR+ T FP L+ LAR+ LAIPAT T SERLFS AGN++T R +L+P +E LV + +W
Sbjct: 1 LTWWRINKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNW 64
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: UPI0011C102C8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C102C8) HSP 1 Score: 80.1 bits (196), Expect = 4.480e-16 Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 1 QASTYIKMCEVDKEGTKVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHS 255
+ +Y++ EVD E PL WWR+ T+FP LANLA++ + IPAT SER FS GNIVT +R+ L P T++ LV L ++
Sbjct: 205 EIKSYLQSVEVDAEAN-----PLEWWRLHQTNFPRLANLAKKYICIPATSAPSERAFSTGGNIVTCHRSALKPETVDKLVFLANN 284
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: UPI001C151A4B (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C151A4B) HSP 1 Score: 79.7 bits (195), Expect = 1.060e-15 Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 64 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKI 264
PL WWR+ T FP L+ LAR+ LAIPAT T SERLFS AGN++T R +L+P +E LV + +W++
Sbjct: 264 PLTWWRINKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNILENLVFCKKNWRL 330
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: UPI001C15BA5C (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C15BA5C) HSP 1 Score: 79.0 bits (193), Expect = 2.200e-15 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 64 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 267
PL WW+ FP L+ LAR+ LAIPAT T SERLFS AGN+VT R +L P T+E LV + +W++V
Sbjct: 272 PLLWWKTNKAQFPILSKLARKYLAIPATSTPSERLFSEAGNVVTIKRTQLLPNTLENLVFCKKNWRLV 339
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 72.8 bits (177), Expect = 8.030e-15 Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 64 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKI 264
PL WW+ FP LA+LA+ L +PAT T SERLFS AGNIV+K R LSP I++L +S +
Sbjct: 33 PLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTFFHYSTAV 99
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 8.920e-15 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 1 QASTYIKMCEVDKEGT---KVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIVE 270
+A+ I++ ++ K T KV+ PL+ WR + ++P LA LARR+LAIP++Q +SER+FS AG VT R++L +ELLV LR+ W +V+
Sbjct: 459 KAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVD 551
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A015N0K8_RHIIW (Dimer_Tnp_hAT domain-containing protein n=5 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015N0K8_RHIIW) HSP 1 Score: 75.1 bits (183), Expect = 1.420e-14 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 64 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 267
PL WW+ T F L+ LAR+ LAIPAT T SERLFS AGN++T R +L+P +E LV + +W++V
Sbjct: 146 PLTWWKTNKTRFLVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNWRLV 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig141321.2865.1 >prot_H-elongata_contig141321.2865.1 ID=prot_H-elongata_contig141321.2865.1|Name=mRNA_H-elongata_contig141321.2865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp MCEVDKEGTKVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFback to top mRNA from alignment at H-elongata_contig141321:1156..1425+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig141321.2865.1 ID=mRNA_H-elongata_contig141321.2865.1|Name=mRNA_H-elongata_contig141321.2865.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=270bp|location=Sequence derived from alignment at H-elongata_contig141321:1156..1425+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig141321:1156..1425+ >mRNA_H-elongata_contig141321.2865.1 ID=mRNA_H-elongata_contig141321.2865.1|Name=mRNA_H-elongata_contig141321.2865.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig141321:1156..1425+ (Himanthalia elongata Himel1 dioecious)back to top |