mRNA_H-elongata_contig14121.2855.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI) HSP 1 Score: 380 bits (976), Expect = 3.380e-124 Identity = 204/354 (57.63%), Postives = 236/354 (66.67%), Query Frame = 2
Query: 239 KVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGI-TVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIE--AGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW 1291
+++VVTGANKGIGLAIAKKLA P H+CVLTSR A G+KAVD+LK EG+ +VV+KQLDIGD ASVERFASE+E+E+GRCDVLVNNA IAFKGSDPTPF+DQ EPTLKTNFFDT AFTE+MLPLVRKS AGRVVN+ASM+G LSIL S D R+AFT+P LTKE L +M +FV DVK+G+H GWPNTCYGMSKLG+IAYT VAAR+E AGS V +N+CCPG YCDTDMTSHRG LTPEEGARTPFMLTQMK + +GG+TG FF++ AL+ W
Sbjct: 32 RISVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKEEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSDAGRVVNVASMAGHLSILGSQDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGSTVTINACCPG---------------------------------------------------------------------------------YCDTDMTSHRGTLTPEEGARTPFMLTQMKSVDEGGLTGEFFRKEALAEW 304
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.280e-73 Identity = 137/265 (51.70%), Postives = 175/265 (66.04%), Query Frame = 2
Query: 242 VAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITV-----VFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYAD---GSQGEKVCDSVRVPNRVKSNTLGTRR---WTG 1003
+AVVTG+NKGIG +A KLA TP IC++ +RD RG++A + G T VFKQLDI D SV+RF EM+ EYGR DVLVNNAAIAFKG+DPTPF+ Q PTL+TNF+ TV T+ +LPL+R+SPA R+VN+ASMSG L IL S + +D F+S LT+ L LM F DV++G H GWP+TCYGMSKLG+IA+T + AR E G ++VN CCPG D GS + + R P + GT+ W+G
Sbjct: 29 IAVVTGSNKGIGKEVAIKLASTPNTICIVAARDMNRGQQAAQEVNIAGQTAGGGGAVFKQLDIADNTSVQRFMQEMQSEYGRLDVLVNNAAIAFKGADPTPFQYQAAPTLRTNFWATVQVTDALLPLLRQSPAARIVNVASMSGHLRIL-SHERQDIFSSSSLTRPVLYDLMRAFEADVQAGVHHQNGWPSTCYGMSKLGVIAFTKILAREEPG--MVVNCCCPGGCRTDMSSGSGSKTAEEGARTPYLLTQMPPGTKSGGFWSG 290
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A836C9X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X3_9STRA) HSP 1 Score: 238 bits (607), Expect = 7.770e-70 Identity = 130/242 (53.72%), Postives = 162/242 (66.94%), Query Frame = 2
Query: 230 MLSKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEY-GRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPV----LTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYAD--GSQGEK 934
M ++V +VTGANKGIGL IA+KL + +CVLT+RD RG A ++L +EG V F+QLDI D S ERFA + E+E+ D LVNNA AFKGSDPTPF +Q EPT+ NFF TVA TER+LPLV++SP GR+VN+ASMSG L I+ ++R F S L + L+ L FV DVK G+H KGWPN+CYGMSKL +IAYT + A E + VN+CCPG D G QG K
Sbjct: 1 MSARVGIVTGANKGIGLEIARKLGREQGWLCVLTARDEERGRSAAESLLSEGAGVRFRQLDISDPDSRERFAKDAEQEFTAGIDALVNNAGFAFKGSDPTPFAEQAEPTMDINFFSTVATTERLLPLVKRSPHGRIVNVASMSGHLRIVPDAELRAKFASAGQPGGLGHDELMLLARGFVQDVKEGKHKEKGWPNSCYGMSKLCLIAYTKILAAREP--TLKVNACCPGYVATDMSGQQGHK 240
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.210e-67 Identity = 136/349 (38.97%), Postives = 187/349 (53.58%), Query Frame = 2
Query: 221 VEAMLSKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFF 1267
+ +++S +AVVTG+NKGIG I KKL+ + +L +R+ G +A +NL+++G+ V F++LDI S++ F ++++ +YG+CDVLVNNAAIAFKGSDPTPF+ Q EPT+KTN+F T++ T+ MLPL++ S + R+VN+AS +G L IL S + + FTS LT + L M +FVNDVK+ + WP +CYG SKLG+IA T V AR +L+N+CCPG YC TDM+SHRG T E GARTPF L LT G VTG FF
Sbjct: 15 IASVMSTIAVVTGSNKGIGYEIVKKLSSIG-YKTILAARNVNLGSQAANNLRSQGLDVEFRELDISSDESIKAFVNKLQSDYGKCDVLVNNAAIAFKGSDPTPFKLQAEPTIKTNYFGTLSLTKLMLPLLQNSTSPRIVNVASQAGALGILPSNERKKFFTSESLTVDELTEAMNQFVNDVKNDKLKENDWPGSCYGTSKLGVIALTKVLARNYPD--ILINACCPG---------------------------------------------------------------------------------YCQTDMSSHRGTRTAENGARTPFYLAT---LTAGSVTGKFF 276
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S3GV84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV84_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.880e-62 Identity = 132/356 (37.08%), Postives = 181/356 (50.84%), Query Frame = 2
Query: 239 KVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTS-PVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEA----GSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW 1291
K+A+VTG NKGIG I KKL I +L R+ G++A NLK G V ++ LDI D S+ RF+ ++ +EYG D+LVNNAAIAFK SDPTPF++Q PT++ NFF T+ TE ++PL++K+ + R+VN+AS SG L ILKS ++++ F + P + +AL L+ E+V+ V+ G H KGWPN+ YG+SKL +IA T + A+ EA G L+N+CCPG YCDTDMTSH+G E GARTP ML + ++ TG FF A W
Sbjct: 2 KLAIVTGGNKGIGYEICKKLGAAGVKI-ILACRNEVLGQEAAANLKELGYDVEYRNLDISDDWSIARFSRDISDEYGHVDILVNNAAIAFKESDPTPFKEQTLPTIEPNFFGTMRITESLMPLLQKAESPRIVNVASQSGHLRILKSEELKERFVNCPSI--DALENLVNEYVSSVQDGTHTEKGWPNSNYGISKLAVIALTRILAKREAEANPGKNFLINACCPG---------------------------------------------------------------------------------YCDTDMTSHKGPRPAEHGARTPAMLALLSEVGPVAPTGKFFFDEAEVEW 273
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S0F9Q4_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F9Q4_9DINO) HSP 1 Score: 213 bits (541), Expect = 8.490e-60 Identity = 133/356 (37.36%), Postives = 184/356 (51.69%), Query Frame = 2
Query: 224 EAMLSKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW 1291
E +++AVVTGANKGIG A++L + + RD RG++A +L E F QLDI D S+ F + +YGR DVLVNNAAIAFKG+DPTPF+ Q PTL+TNF+ TVA T+++LPL+R+ + RVVN+ASM+G+L + SG ++ F+SP LT++ L L+ +F +DV +G+H +GW N+ YG+SKL +IAYT + AR E G+ + N+CCPG YCDTDM+SHRG +P EGAR ML ++D G TG F + +S W
Sbjct: 43 EQATARIAVVTGANKGIGYHTAEQLVKAGGLRVIAACRDPDRGQQAARHLGAE-----FVQLDISDEGSIGAFVQYIASKYGRLDVLVNNAAIAFKGADPTPFQGQTLPTLRTNFWGTVALTDQLLPLLRRGRSPRVVNVASMAGRLGQV-SGSLQRRFSSPALTRDELFALVRKFQDDVAAGRHRQEGWGNSNYGLSKLALIAYTLLVAR-EEGNAMRANACCPG---------------------------------------------------------------------------------YCDTDMSSHRGPRSPAEGARNATMLALLRD---DGPTGAFVRDMQISEW 307
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: W7T5T2_9STRA (Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5T2_9STRA) HSP 1 Score: 211 bits (536), Expect = 9.480e-59 Identity = 112/231 (48.48%), Postives = 156/231 (67.53%), Query Frame = 2
Query: 242 VAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGI-TVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGR-VVNMASMSGQLSILKSGDMRDA-FTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAAR--IEAGSR------VLVNSCCPG 901
+ +VTG+NKGIGL I KKLA T + +L +R+ + GE+A L++ G+ V ++ LD+ S+E F E++++YGR D+LVNNA IAFKG DPTPFRDQ PT KTNF+ TV + M PL+RKS +VN+AS SG+LSIL + + A +SP+LT++ L L+ +F +DV++G HA GWPNTCYGMSKL +IA+ V AR +E G+ + + SCCPG
Sbjct: 56 ITIVTGSNKGIGLEILKKLAPTSS-VAILAARNPSLGEQAAQELRDHGLENVKYRPLDVSSAESIEHFVKEIQKDYGRADILVNNAGIAFKGRDPTPFRDQAAPTFKTNFWGTVELIDAMTPLLRKSTGCPCIVNVASQSGRLSILDTDRGKQAEISSPILTRDRLFELVRQFEHDVRTGTHAENGWPNTCYGMSKLALIAFGRVFARNEMEGGTEKEGKTSIWLASCCPG 285
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: K0TIM0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIM0_THAOC) HSP 1 Score: 210 bits (535), Expect = 1.860e-57 Identity = 128/256 (50.00%), Postives = 160/256 (62.50%), Query Frame = 2
Query: 173 RLLLQIKLLIICLIDPVEAMLSKVAVVTGANKGIGLAIAKKLAQTPEHI-CVLTSRDRARGEKAVDNLKN-----EGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGS 922
R++L + +LI C E M S+VAVVTGANKGIG IA LA + VL RD ARG +AV+ + + V +QL IG S + F + M E YG+ DVLVNNA IAFKGSDPTPF Q +PTL NF+ TV FTE MLPL+RK R+VN+ASM+G L L+S +++ F+SP LTK+ L L+ EF DV SG+H GW N+ YGMSKL +IA T + AR E G + VN CCPG D S
Sbjct: 5 RIILFLSILIRCSQALSETM-SRVAVVTGANKGIGFHIAAGLASSGLFSDVVLGCRDEARGRQAVETIASLPGTPRSCRVSCRQLAIGSRESHDAFIAGMTERYGKVDVLVNNAGIAFKGSDPTPFEGQCKPTLAVNFWGTVDFTEEMLPLLRKGSDARIVNVASMAGHLGQLRSRELQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTGAGWGNSNYGMSKLALIAMTKIWAREEEGD-ISVNCCCPGYCATDMS 258
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S2LP57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LP57_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.060e-56 Identity = 110/247 (44.53%), Postives = 158/247 (63.97%), Query Frame = 2
Query: 236 SKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEG-----ITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGS------DPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGSQGEKVCD 943
+K+A++TG NKGIG IA+++ P ++ SRD A G+KA D+LK G + + LD+ D S+ A +E+EYGR DVL+NNAAI F D TPF++Q + T++TN+F T+ T+ LPL++++ + R++N+AS +G+L+IL+S ++ D FTS LT+ L LM +FVNDV+SG H KGWPNTCYGMSKLGIIA T + AR G +L+NS PG D + + D
Sbjct: 43 NKIALITGGNKGIGKEIARRIGTEPGFTAIIASRDVALGQKAADDLKESGEYECDVVALPVPLDLTDDNSIIAAAKHVEKEYGRLDVLINNAAICFNDPTLYGKVDHTPFQNQADITIRTNYFGTLKVTKECLPLLKQAASPRIINVASAAGRLTILRSQELVDKFTSNTLTEPQLSTLMEQFVNDVQSGTHEEKGWPNTCYGMSKLGIIALTKILARENEG--MLINSVDPGYCKTDQNNNQGTVD 287
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A6U0U495_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U495_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.740e-56 Identity = 117/240 (48.75%), Postives = 148/240 (61.67%), Query Frame = 2
Query: 230 MLSKVAVVTGANKGIGLAIAKKLAQT-------PEHICVLTSRDRARGEKAVDNLKNEG----ITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAG-----RVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPG 901
M V VVTGANKGIGL I + A P +L +RD ARGE AV+ L+ G V FKQLDI D S +RF ++++EE+G+ D LVNNAAIAFKGSDPTPF +Q EPTL NF+ T AF + MLPL++ + R+VN+ASMSG L ILKS ++RD F LT++ L LM F +V + G+P++ YGMSKLG+IAY+ V AR V SCCPG
Sbjct: 1 MAGSVIVVTGANKGIGLNIVTRFAHAAAEALAPPLPTVLLCARDAARGEAAVEQLRANGGDPASVVKFKQLDISDEESRKRFVADVQEEFGKVDCLVNNAAIAFKGSDPTPFEEQTEPTLNVNFYSTCAFIDEMLPLLQAAAEAEDAKPRIVNVASMSGHLRILKSNELRDQFARDSLTRDELFGLMDRFRTEVADHTYKKSGFPSSNYGMSKLGVIAYSRVLARENPDIDVF--SCCPG 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14121.2855.1 >prot_H-elongata_contig14121.2855.1 ID=prot_H-elongata_contig14121.2855.1|Name=mRNA_H-elongata_contig14121.2855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=398bp MLSGGFPKKLMPTSTQSFHFSTLFRLLLQIKLLIICLIDPVEAMLSKVAVback to top mRNA from alignment at H-elongata_contig14121:125..5094+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14121.2855.1 ID=mRNA_H-elongata_contig14121.2855.1|Name=mRNA_H-elongata_contig14121.2855.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4970bp|location=Sequence derived from alignment at H-elongata_contig14121:125..5094+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14121:125..5094+ >mRNA_H-elongata_contig14121.2855.1 ID=mRNA_H-elongata_contig14121.2855.1|Name=mRNA_H-elongata_contig14121.2855.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2388bp|location=Sequence derived from alignment at H-elongata_contig14121:125..5094+ (Himanthalia elongata Himel1 dioecious)back to top |