mRNA_H-elongata_contig140984.2841.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig140984.2841.1
Unique NamemRNA_H-elongata_contig140984.2841.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: D8LSR3_ECTSI (Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR3_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 2.630e-138
Identity = 197/256 (76.95%), Postives = 219/256 (85.55%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYWYLMQDG IEFEIKLSGELSTNL+SEGE   TP HGVIVAPGVNAQ+HQH FCARLDMSVDGHKN VKE DVV +P+G +NPAGNAFRA+YT L++E QA+R+A P AARSW++ N  SINP++G+PVAYKL+PQT GP HP LMTG  SAVT+RGEFATKALWVT   D ERWPAGD+TVQS GG    GLP WT  DR+V DED+VLWHSFGL+HVPR+EDFPVMPCESTGFTLKPDGFFSGNP IDL P
Sbjct:  412 YLFYWYLMQDGSIEFEIKLSGELSTNLLSEGEP--TPQHGVIVAPGVNAQLHQHMFCARLDMSVDGHKNTVKEADVVRVPRGEDNPAGNAFRAQYTPLVTEKQAQREANPRAARSWLIQNPSSINPINGKPVAYKLVPQTFGPTHPLLMTGEDSAVTARGEFATKALWVTPHRDDERWPAGDFTVQSTGGE---GLPAWTKHDRNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDLAP 662          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A6H5KQ64_9PHAE (Amine oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQ64_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.530e-135
Identity = 198/261 (75.86%), Postives = 219/261 (83.91%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQ-----HNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYWYLMQDGRIEFEIKLSGELSTNL+SEGES  TP HGVIVAPGVNAQ+HQ     H FCARLDMSVDG KN VKE DVV +P G +NPA NAFRA+YT L++E QA+R+A P AARSW++ N  SINP++G+PVAYKL+PQT GP HP LMTG  SAVT+RGEFATKALWVT   D ERWPAGD+TVQS GG    GLP WT  DR+V DED+VLWHSFGL+HVPR+EDFPVMPCESTGFTLKPDGFFSGNP IDLPP
Sbjct:  449 YLFYWYLMQDGRIEFEIKLSGELSTNLLSEGES--TPQHGVIVAPGVNAQLHQAWMTPHMFCARLDMSVDGQKNTVKEADVVRVPCGEDNPASNAFRAQYTPLVTEKQAQREANPRAARSWLIQNPSSINPINGKPVAYKLVPQTFGPTHPLLMTGEDSAVTARGEFATKALWVTPHRDDERWPAGDFTVQSTGGE---GLPAWTKHDRNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDLPP 704          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A830HQ12_9CHLO (Amine oxidase n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HQ12_9CHLO)

HSP 1 Score: 330 bits (847), Expect = 1.140e-105
Identity = 162/256 (63.28%), Postives = 193/256 (75.39%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYW L QDG IEF+IKLSGELSTNL+SEGE  + P +GV+VAPGVNAQ+HQH FCARLDM VDG  N+V EVDV  LP    NP GNAF+A+ T L +E  A+R    +A R+W + N   IN +SG PV YKL+P T G A PTLMT    AV +RGEFATK LWVT  SD ER+PAG++T QS G +   GLP WTS++RSV + D+V WH+FG++HVPR EDFPVMPCE+TGF LKPD FF+GNP+IDLPP
Sbjct:  458 YLFYWTLHQDGSIEFQIKLSGELSTNLLSEGE--EAPAYGVMVAPGVNAQVHQHMFCARLDMDVDGSANSVAEVDVETLPVDASNPHGNAFKAKKTVLKTESDAKRTYDSNACRTWKIFNPSKINEISGEPVGYKLVPFTSGAAQPTLMTSPSCAVNTRGEFATKNLWVTSHSDDERYPAGEWTPQSTGAL---GLPEWTSKNRSVENTDVVCWHAFGVMHVPRPEDFPVMPCETTGFMLKPDNFFTGNPSIDLPP 708          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A7S1DXA7_HEMAN (Amine oxidase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DXA7_HEMAN)

HSP 1 Score: 311 bits (798), Expect = 3.420e-103
Identity = 148/256 (57.81%), Postives = 180/256 (70.31%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYW   QDG I++EIKLSGELSTNL+S GE    P HGVIVAPGVN+Q HQH FC RLD+ V G  N V E+D++  P  P NP GN F+ + T+L +E +  R   P  AR W + N   +N +SG+PVAYKL+P TRGPA P L+     AV  +G FATK LWVT  S SER+PAG++T Q  G   + GLP WT+QDR +  +D+VLWH FG+ H+PR+EDFPVMPCE TGFTLKPDGF  GNP ID+PP
Sbjct:   66 YLFYWRFKQDGTIDYEIKLSGELSTNLMSAGED--VPSHGVIVAPGVNSQYHQHMFCTRLDVEVAGASNTVSEIDIITEPMSPSNPYGNCFKPQETTLRTEKEGIRTGDPMKARHWKISNPSILNSISGKPVAYKLIPFTRGPAQPPLLVSPDCAVAKKGMFATKHLWVTPYSPSERYPAGEFTPQGDG---SNGLPAWTAQDRQLDGQDVVLWHCFGVAHIPRVEDFPVMPCEVTGFTLKPDGFSLGNPGIDIPP 316          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A7S1GM92_CYCTE (Amine oxidase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM92_CYCTE)

HSP 1 Score: 309 bits (791), Expect = 3.240e-102
Identity = 156/259 (60.23%), Postives = 187/259 (72.20%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALP-QGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHS-INPVSGRPVAYKLLPQTRGPAHPTLMTGVQS-AVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYW L  DG I+FEI+LSGELSTNL S GE    P+ G +VAPGVNAQ+HQH FCARLDM VDG KN V EVDVV +P     NP GNAF A  T L +E +A R    + ARSW + N    +N +SG+PVAYKL+P TRGPA P L+T  +  AV+ +G FA   LWVT Q+D+ER+PAG+YT Q+L   E  GLP W   +R++  ED+VLWHSFG+ HVPR+EDFPVMPCE+TGFTLKPDGF  GNP ID+PP
Sbjct:   52 YLFYWRLKLDGTIDFEIRLSGELSTNLPSAGEDPTNPEWGTLVAPGVNAQVHQHMFCARLDMEVDGTKNTVSEVDVVPMPYDAVHNPYGNAFGASETVLTTEQEAVRTYDANKARSWKISNAEGKVNSISGKPVAYKLIPFTRGPAQPPLITHPEECAVSHKGAFAKAHLWVTPQTDTERYPAGEYTPQAL---EPDGLPKWIQSNRNIEGEDVVLWHSFGVTHVPRVEDFPVMPCETTGFTLKPDGFSMGNPAIDMPP 307          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A2V3J6I3_9FLOR (Amine oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I3_9FLOR)

HSP 1 Score: 319 bits (818), Expect = 8.000e-102
Identity = 159/255 (62.35%), Postives = 190/255 (74.51%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLP 765
            YLFYWYL  DG I  EIKLSGELSTNL+SEGE+   P  GVIVAPGVNAQIHQH FCARL+M+VDG +N+V+EV++VA  +G  NP GN FR   T L SE  A+RDAA  AAR+W + N H  N +SG+ VAYKL+P T G   P L+T   SAV+ RG FA KA+WVT     E++PAG++  QSLGG    GLP WTSQ+RS++DE IV+WHSFG+ HVPR EDFP+MPCESTGFTLKPD F  GNP +D+P
Sbjct:  420 YLFYWYLHHDGSISHEIKLSGELSTNLLSEGETH--PTAGVIVAPGVNAQIHQHMFCARLEMAVDGAQNSVEEVNLVAAEEGSHNPFGNIFRVESTLLRSEQDAQRDAA--AARTWRIFNPHKSNTISGKKVAYKLVPYTFGAFQPPLLTTDDSAVSKRGRFAKKAIWVTPYRKDEQFPAGEFPTQSLGG---DGLPSWTSQNRSIVDERIVIWHSFGVAHVPRTEDFPIMPCESTGFTLKPDCFLMGNPGVDIP 667          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A448ZC22_9STRA (Amine oxidase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC22_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.100e-98
Identity = 156/257 (60.70%), Postives = 187/257 (72.76%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHS-INPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYW+L QDG I+F+IKLSGELSTNL+S+GES   P HGV+VAP VNAQIHQH FCARLDMSVD HKN++ EVD+ + P    NP GN F  + T L  E  A+R    + ARSW + N     N ++G+PVAYKLLP + GP+ P L+T    AVT +GEFATK LWVT  SD ER+PAG+ TV   G   + GLP WT  +R++  ED+VLWH+FG+ HVPR EDFPVMPCE+TGFTLKPDGFF GNP IDL P
Sbjct:  469 YLFYWHLRQDGCIDFKIKLSGELSTNLLSDGES--VPSHGVMVAPNVNAQIHQHMFCARLDMSVDSHKNSISEVDMYSEPFSDTNPYGNCFNVKETILEDEESAKRVYDANKARSWKIFNAEGKTNGMTGKPVAYKLLPFSMGPSQPILLTDPSCAVTKKGEFATKHLWVTPHSDKERYPAGECTVLGDG---SDGLPDWTKANRNLQGEDLVLWHAFGVAHVPRTEDFPVMPCETTGFTLKPDGFFDGNPGIDLEP 720          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: K8EHE4_9CHLO (Amine oxidase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EHE4_9CHLO)

HSP 1 Score: 311 bits (796), Expect = 1.850e-98
Identity = 151/257 (58.75%), Postives = 189/257 (73.54%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQS-DSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFY+Y  QDG IEFEIKL+GELSTN +S GES+  P HGV+VAPGVN+QIHQH FCARLD+++DG++N V E+D+ +          N F    T L++ELQARR      AR W + N  S+NPV+ +PV+YKL+P TRGPA PTL+TG + AVT +GEFATK LWVT  +  +ERWPAG++TVQ   G    GLP WT  DR +   ++V+WH+FG+VH+PR EDFPVMP E TGF+LKPDGFF+GNP IDLPP
Sbjct:  422 YLFYYYFQQDGTIEFEIKLTGELSTNAISAGESNDDPTHGVLVAPGVNSQIHQHMFCARLDVAIDGNENEVSEIDICS--DTSTGSCQNVFGPVTTPLVTELQARRVCDSTKARVWKISNPSSLNPVTKKPVSYKLIPFTRGPAMPTLLTGPECAVTKKGEFATKNLWVTPYNWPNERWPAGEFTVQGALGE---GLPEWTKDDRDISSGELVIWHAFGVVHIPRPEDFPVMPVEHTGFSLKPDGFFAGNPTIDLPP 673          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A1Z5JVD1_FISSO (Amine oxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVD1_FISSO)

HSP 1 Score: 300 bits (769), Expect = 1.100e-94
Identity = 155/260 (59.62%), Postives = 188/260 (72.31%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHK-NAVKEVDVVALPQGP-ENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVID--EDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYW L QDG I+FEIKLSGELSTNL+S  ESD  P HGV+VAPGVN+QIHQH FCARLDM+VDG + N V+EVD+V+ P  P  NP GN F    T L +E  A R      AR+W + +N + NP++G+  +YKL+P ++G A P LMT   SAV  +G FAT  LWVT     ER+PAG+YT Q  G V   GLP WTSQDRS++D  E IV+WH+FG++HVPR+EDFPVMPCE TGF+LKPD FF GNP ID+PP
Sbjct:  389 YLFYWRLKQDGMIDFEIKLSGELSTNLLSAPESDGRPTHGVLVAPGVNSQIHQHMFCARLDMAVDGAEHNTVREVDIVSRPVDPVSNPYGNVFEPVETLLTTEQAAIRTLDVTKARTWKISSNKT-NPINGKLTSYKLVPFSKGAAQPVLMTDPSSAVFKKGTFATSHLWVTPYHPKERFPAGEYTPQGDGSV---GLPQWTSQDRSLLDCPEGIVVWHAFGVLHVPRIEDFPVMPCEITGFSLKPDNFFLGNPGIDIPP 644          
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A7S2XTZ3_9STRA (Amine oxidase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTZ3_9STRA)

HSP 1 Score: 293 bits (751), Expect = 4.200e-91
Identity = 155/259 (59.85%), Postives = 187/259 (72.20%), Query Frame = 1
Query:    1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKT--PDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHS-INPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
            YLFYW L QDG I+FEIKLSGELSTNL+S  E +KT    +G IVA GVNAQIHQH FCARLDM+VDG  N V EVDVVA      NP GNAF    T+L +E  A R      ARSW + N     NPV+ +PVAYKL+P +RG +HPTL+T  +SAV+ +G FA   L+VT  SD+ER+PAG+YT Q  G   + GLP W + +RS+  +D+VLWHSFG+ H+PR+EDFPVMPCE+TGF LKPDGFF+GNP IDLPP
Sbjct:  481 YLFYWRLKQDGTIDFEIKLSGELSTNLLS-AEEEKTGKSTYGTIVARGVNAQIHQHMFCARLDMAVDGDINTVSEVDVVA-SGSHNNPYGNAFGPVETTLTTESGASRTYDATKARSWKISNAEGKTNPVNDKPVAYKLIPFSRGGSHPTLLTSPESAVSKKGAFANYHLFVTPHSDTERFPAGEYTPQGNG---SNGLPDWMAANRSIESKDVVLWHSFGVTHMPRVEDFPVMPCETTGFMLKPDGFFAGNPAIDLPP 734          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSR3_ECTSI2.630e-13876.95Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KQ64_9PHAE1.530e-13575.86Amine oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A830HQ12_9CHLO1.140e-10563.28Amine oxidase n=2 Tax=Pycnococcus provasolii TaxID... [more]
A0A7S1DXA7_HEMAN3.420e-10357.81Amine oxidase n=1 Tax=Hemiselmis andersenii TaxID=... [more]
A0A7S1GM92_CYCTE3.240e-10260.23Amine oxidase n=1 Tax=Cyclophora tenuis TaxID=2168... [more]
A0A2V3J6I3_9FLOR8.000e-10262.35Amine oxidase n=1 Tax=Gracilariopsis chorda TaxID=... [more]
A0A448ZC22_9STRA1.100e-9860.70Amine oxidase n=1 Tax=Pseudo-nitzschia multistriat... [more]
K8EHE4_9CHLO1.850e-9858.75Amine oxidase n=1 Tax=Bathycoccus prasinos TaxID=4... [more]
A0A1Z5JVD1_FISSO1.100e-9459.62Amine oxidase n=2 Tax=Fistulifera solaris TaxID=15... [more]
A0A7S2XTZ3_9STRA4.200e-9159.85Amine oxidase n=2 Tax=Attheya septentrionalis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig140984contigH-elongata_contig140984:279..1458 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.7
Seed ortholog evalue7.8e-108
Seed eggNOG ortholog2880.D8LSR3
Preferred nameAMO2
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K13281
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006878,GO:0008131,GO:0008150,GO:0008152,GO:0009056,GO:0009308,GO:0009310,GO:0009636,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0019725,GO:0030003,GO:0042221,GO:0042592,GO:0042763,GO:0042764,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048038,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071704,GO:0071941,GO:0097237,GO:0098754,GO:0098771,GO:1901564,GO:1901565,GO:1901575,GO:1990748
EggNOG free text desc.amine oxidase
EggNOG OGsCOG3733@1,KOG1186@2759
EC1.4.3.21
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCopper amine oxidase, N2/N3-terminal
Ec32 orthologEc-15_002910.2
Exons2
Model size768
Cds size747
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig140984.2841.1prot_H-elongata_contig140984.2841.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig140984 300..1458 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929837.775693-UTR-H-elongata_contig140984:278..2991622929837.775693-UTR-H-elongata_contig140984:278..299Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig140984 279..299 +
1691679177.8287914-UTR-H-elongata_contig140984:278..2991691679177.8287914-UTR-H-elongata_contig140984:278..299Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig140984 279..299 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929837.7990973-CDS-H-elongata_contig140984:299..4371622929837.7990973-CDS-H-elongata_contig140984:299..437Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig140984 300..437 +
1691679177.8392816-CDS-H-elongata_contig140984:299..4371691679177.8392816-CDS-H-elongata_contig140984:299..437Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig140984 300..437 +
1622929837.8147752-CDS-H-elongata_contig140984:849..14581622929837.8147752-CDS-H-elongata_contig140984:849..1458Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig140984 850..1458 +
1691679177.8473017-CDS-H-elongata_contig140984:849..14581691679177.8473017-CDS-H-elongata_contig140984:849..1458Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig140984 850..1458 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig140984.2841.1

>prot_H-elongata_contig140984.2841.1 ID=prot_H-elongata_contig140984.2841.1|Name=mRNA_H-elongata_contig140984.2841.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
MQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFC
ARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRD
AAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVT
SRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVI
DEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP
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mRNA from alignment at H-elongata_contig140984:279..1458+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig140984.2841.1 ID=mRNA_H-elongata_contig140984.2841.1|Name=mRNA_H-elongata_contig140984.2841.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1180bp|location=Sequence derived from alignment at H-elongata_contig140984:279..1458+ (Himanthalia elongata Himel1 dioecious)
TATCTCTTCTACTGGTACCTGATGCAAGACGGTCGCATAGAGTTTGAGAT CAAGCTCTCGGGAGAGCTCTCCACGAACCTGGTCTCCGAGGGAGAGTCCG ATAAAACGCCGGACCACGGTGTCATCGTGGCTCCCGGAGTCAACGCCCAG ATCCACCAGGTGATAAAAAAAGGGCTCACTGTTTGGTAAGGCGCTTGTCG AATGAGATCAGTTCCACTCGCCAGGGCAGATCAGGTTGGCTCGATTTATC TCAGATTTCATTCCGCTGGTGGTTTTGGGTCCCTCGCCCCTTCTCCTTTT ACGCATTTCCTGACGAATGAAAACCCATGCACGAGTCGTTTCAATATTTC TCCGATTATTATTTTTTAATATCTGGAGTATTTAGATGGCTCGACGTAGA GGATACTTTCGGCAATGTCTAGTCTGTAAGCCATCGCTATCGATGGTCAT TTTATCGCTATCACTCGAAACTCCCGTTTGCGTAGACCCAGCACGCGTAG ACCCCAGGGAACGCGACCCATCCTCCCACCCCCGCTCTCCCCGCTCCCCC ACTCAATACACCCCTCTCCAGCACAACTTCTGCGCGCGCCTGGATATGTC TGTGGATGGACACAAGAACGCGGTCAAGGAGGTCGACGTCGTAGCCCTTC CTCAGGGCCCAGAAAACCCCGCCGGCAACGCCTTTCGCGCGCGGTACACC TCTCTGCTGTCGGAGCTTCAGGCGCGACGGGACGCCGCCCCGCACGCGGC CAGGTCGTGGGTCGTCCTGAACAACCACTCGATCAACCCGGTCAGCGGGA GACCCGTGGCGTACAAGCTTCTGCCGCAGACGCGAGGCCCCGCACACCCC ACTCTGATGACGGGGGTCCAGAGCGCGGTGACCTCCCGTGGCGAGTTCGC GACCAAGGCATTATGGGTAACCCAGCAGAGTGACTCGGAGCGGTGGCCAG CCGGCGATTACACGGTGCAGAGCCTGGGCGGCGTTGAGACTGGAGGGCTC CCGGTGTGGACGAGCCAAGATCGGAGCGTTATCGACGAGGACATCGTCCT GTGGCACTCGTTCGGGCTCGTGCATGTCCCCAGGATGGAGGACTTCCCGG TGATGCCGTGCGAGTCGACTGGCTTCACGCTCAAGCCCGACGGGTTCTTC TCTGGCAACCCTAACATCGATCTCCCTCCC
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Coding sequence (CDS) from alignment at H-elongata_contig140984:279..1458+

>mRNA_H-elongata_contig140984.2841.1 ID=mRNA_H-elongata_contig140984.2841.1|Name=mRNA_H-elongata_contig140984.2841.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1494bp|location=Sequence derived from alignment at H-elongata_contig140984:279..1458+ (Himanthalia elongata Himel1 dioecious)
ATGCAAGACGGTCGCATAGAGTTTGAGATCAAGCTCTCGGGAGAGCTCTC
CACGAACCTGGTCTCCGAGGGAGAGTCCGATAAAACGCCGGACCACGGTG
TCATCGTGGCTCCCGGAGTCAACGCCCAGATCCACCAGATGCAAGACGGT
CGCATAGAGTTTGAGATCAAGCTCTCGGGAGAGCTCTCCACGAACCTGGT
CTCCGAGGGAGAGTCCGATAAAACGCCGGACCACGGTGTCATCGTGGCTC
CCGGAGTCAACGCCCAGATCCACCAGCACAACTTCTGCGCGCGCCTGGAT
ATGTCTGTGGATGGACACAAGAACGCGGTCAAGGAGGTCGACGTCGTAGC
CCTTCCTCAGGGCCCAGAAAACCCCGCCGGCAACGCCTTTCGCGCGCGGT
ACACCTCTCTGCTGTCGGAGCTTCAGGCGCGACGGGACGCCGCCCCGCAC
GCGGCCAGGTCGTGGGTCGTCCTGAACAACCACTCGATCAACCCGGTCAG
CGGGAGACCCGTGGCGTACAAGCTTCTGCCGCAGACGCGAGGCCCCGCAC
ACCCCACTCTGATGACGGGGGTCCAGAGCGCGGTGACCTCCCGTGGCGAG
TTCGCGACCAAGGCATTATGGGTAACCCAGCAGAGTGACTCGGAGCGGTG
GCCAGCCGGCGATTACACGGTGCAGAGCCTGGGCGGCGTTGAGACTGGAG
GGCTCCCGGTGTGGACGAGCCAAGATCGGAGCGTTATCGACGAGGACATC
GTCCTGTGGCACTCGTTCGGGCTCGTGCATGTCCCCAGGATGGAGGACTT
CCCGGTGATGCCGTGCGAGTCGACTGGCTTCACGCTCAAGCCCGACGGGT
TCTTCTCTGGCAACCCTAACATCGATCTCCCTCCCCACAACTTCTGCGCG
CGCCTGGATATGTCTGTGGATGGACACAAGAACGCGGTCAAGGAGGTCGA
CGTCGTAGCCCTTCCTCAGGGCCCAGAAAACCCCGCCGGCAACGCCTTTC
GCGCGCGGTACACCTCTCTGCTGTCGGAGCTTCAGGCGCGACGGGACGCC
GCCCCGCACGCGGCCAGGTCGTGGGTCGTCCTGAACAACCACTCGATCAA
CCCGGTCAGCGGGAGACCCGTGGCGTACAAGCTTCTGCCGCAGACGCGAG
GCCCCGCACACCCCACTCTGATGACGGGGGTCCAGAGCGCGGTGACCTCC
CGTGGCGAGTTCGCGACCAAGGCATTATGGGTAACCCAGCAGAGTGACTC
GGAGCGGTGGCCAGCCGGCGATTACACGGTGCAGAGCCTGGGCGGCGTTG
AGACTGGAGGGCTCCCGGTGTGGACGAGCCAAGATCGGAGCGTTATCGAC
GAGGACATCGTCCTGTGGCACTCGTTCGGGCTCGTGCATGTCCCCAGGAT
GGAGGACTTCCCGGTGATGCCGTGCGAGTCGACTGGCTTCACGCTCAAGC
CCGACGGGTTCTTCTCTGGCAACCCTAACATCGATCTCCCTCCC
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