mRNA_H-elongata_contig140935.2837.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig140935.2837.1
Unique NamemRNA_H-elongata_contig140935.2837.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: D8LJD0_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD0_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.590e-121
Identity = 197/345 (57.10%), Postives = 240/345 (69.57%), Query Frame = 1
Query:    1 AAVKLAGASGFVAWDWTDQSTGLYGEQLEIIFGADTDSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQD---SMSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWEYSPV-SFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGG 1023
            AAVKL GASG + W WTD S G      ++    DTDSN+DV++GG   G W ++N + V HLAAVKL+ STGDE+WR+Q+   D   S+ + FY  YGSG++  VAVD DDN FLVG T+ SLV GEG  GD D+F+IK+DG  G+EI+TVQGG S  +D     KVD AGD+VA G  G E   N +VVK SG DGS+LWEYSPV SFT DV  +VDVD Q +VY++GG DA N  G + E+PVV+KL  A G + W Y G  TSR  F+ V+VDPTTGWVVGAG+TEGTWL G AQGG DFAAVVLDGD G+E+ RYQ+GT   D + F GFD+ G L  GG
Sbjct:   67 AAVKLDGASGDLLWTWTDSSLG---SAADLFLAGDTDSNDDVVMGGRTEGYWSSSNPDSVAHLAAVKLDGSTGDEIWRYQEHPPDTYTSLGSYFY--YGSGSVTGVAVDGDDNCFLVGQTWGSLVFGEGDAGDSDFFVIKLDGTDGSEIWTVQGGESTSYDFFVDVKVDSAGDLVAIGIGGDEDAINVVVVKFSGIDGSILWEYSPVTSFTHDVPESVDVDTQDDVYLAGGYDALNLEGDLAETPVVLKLDGATGDVVWTYEGVATSRAGFFGVAVDPTTGWVVGAGWTEGTWLTGAAQGGYDFAAVVLDGDTGDEIGRYQDGTTDDDYLSFVGFDAVGGLILGG 406          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: A0A6H5KD80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD80_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 2.470e-119
Identity = 196/345 (56.81%), Postives = 238/345 (68.99%), Query Frame = 1
Query:    1 AAVKLAGASGFVAWDWTDQSTGLYGEQLEIIFGADTDSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDS---MSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWEYSPV-SFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGG 1023
            AAVKL GASG V W WT  S G    + ++   +DTDSNNDVI+GG   G W ++N + V HLAAVKL+ STGDE+WR+Q+   DS   + + FY  YGSG++  VAVD DDN FL G TY SLV GEG PGD D+F+IK+DG  G+E++TVQGG S  +DA +  KVD  GD++A G  G E   N +VVK SGTDG+VLWEYSPV SFT DV  +VDVD Q +VY++GG DA N  G + E+PVV+KL  A G + W Y G  TS   F  ++VD TTGWVVGAG+T GTWL G AQGG DFAAVVLDG  G+EL RYQ+GT   D + F GFDS G L  GG
Sbjct:   63 AAVKLEGASGEVLWTWTASSLG---SEADVFLASDTDSNNDVIMGGTTEGYWSSSNHDSVPHLAAVKLDGSTGDEIWRYQERPPDSYTSLESFFY--YGSGSVLGVAVDGDDNCFLAGQTYGSLVFGEGDPGDSDFFVIKLDGTDGSEMWTVQGGESTSFDAFHNVKVDSGGDLIAVGIGGDEDAVN-VVVKFSGTDGAVLWEYSPVTSFTHDVPQSVDVDTQDDVYIAGGYDALNLHGILAETPVVLKLDGATGDVVWTYEGVNTSSAGFSRIAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDDYLSFVGFDSVGGLIIGG 401          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: D7FKX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX8_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 9.970e-117
Identity = 191/343 (55.69%), Postives = 235/343 (68.51%), Query Frame = 1
Query:    1 AAVKLAGASGFVAWDWTDQSTGLYGEQLEIIFGADTDSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTT-FYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWEYSPV-SFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGG 1023
            AAVKL GASG V W WT  S G    + ++    DTDSNND+++GG   G W ++N + V H+A VKL+  TGDE+WR+Q+   DS ++   Y  YG G+++ VAVD DDN  LVG TY SLV GEG PGD D+F+IK+DG  G+EI+TVQGG S  +D+L+  KVD  GD++  G  G E   N +VVK SGTDG+VLWEYSPV S T DV  +VDVD Q +VY++GG DA N  G + E+PVV+KL  A G + W Y G  TS   F SV+VD TTGWVVGAG+T GTWL G AQGG DFAAVVLDG  G+EL RYQ+GT   D +KF GFDS G L  GG
Sbjct:   63 AAVKLEGASGEVLWTWTASSLG---SEADMFLAVDTDSNNDIVMGGRTEGYWSSSNPDSVAHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSYFYYGYGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIVVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAGGYDALNLQGTLAETPVVLKLDGATGDVVWTYEGVATSSAGFRSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDDSLKFVGFDSVGGLILGG 402          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: D8LJC9_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC9_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 1.850e-114
Identity = 188/343 (54.81%), Postives = 234/343 (68.22%), Query Frame = 1
Query:    1 AAVKLAGASGFVAWDWTDQSTGLYGEQLEIIFGADTDSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTTFYTIY-GSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWEYSPV-SFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGG 1023
            AAVKL GASG V W WT  S G    + +     DTDSNND+++GG   G W ++N +   H+A VKL+  TGDE+WR+Q+   DS ++   ++Y G G+++ VAVD DDN  LVG TY SLV GEG PGD D+F+IK+DG  G+EI+TVQGG S  +D+L+  KVD  GD++A G  G E   N +VVK SGTDG+VLWEYSPV S T DV  +VDVD Q +VY++GG DA N  G + E+PVV+KL  A G + W Y G TTS      V+VD TTGWVVGAG+TEGTWL G AQGG DFAAVVLDG  G+EL RYQ+GT   + + F GFDS G L  GG
Sbjct:   63 AAVKLEGASGEVLWTWTASSLG---SEADTFLAVDTDSNNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSWGNSVYHGLGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIAVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAGGYDALNLQGTLAETPVVLKLDGATGDVVWTYEGVTTSSAGLICVAVDLTTGWVVGAGWTEGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDEYLSFVGFDSVGGLILGG 402          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: A0A6H5JLD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD3_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 6.050e-97
Identity = 171/345 (49.57%), Postives = 226/345 (65.51%), Query Frame = 1
Query:    4 AVKLAGASGFVAWDWTDQSTGLYGEQLEIIFGADTDSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSE--GQTNFLVVKLSGTDGSVLWEYSPVSFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGGYTS 1032
            AVKL G SG   W W D S  L G       GAD+ SN  VILGG+  G+W  +N +G+R +AAVKL+   G EVWR+Q  A    ST+ +  YG   +  VAVD  D+  LVG TYN+LVDG G PGD D+F IK+DG++G E++ VQGG++F  + L  AKVD +GD+VAAG + +E   + NFLVVKLSG+DGSVLWEY+P + +  V H+VD+DD+ +VYV+GGE A N  G +  + VV+KL   +G   W Y G      +  SV+ DP TGWVVGAG  +G W+ G + GG D+AAVVLDGD G EL R+Q+GT G D ++F  FD +G  F GG+++
Sbjct:   65 AVKLDGDSGETLWTWVDSS--LQGADWMTSAGADSASN--VILGGFTNGEWGTSNLDGLRDIAAVKLDGEAGTEVWRYQAAA----STSSFGGYGVSYVLGVAVDSTDHPVLVGTTYNNLVDGVGVPGDWDFFAIKLDGMTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSAASGGVFHSVDLDDRNHVYVAGGEGAPNFQGKVGTTAVVLKLDGESGVERWSYRGTGGDGIMLNSVAADPITGWVVGAGGAQGNWVEGASVGGFDYAAVVLDGDSGAELTRWQDGTLGDDVLEFVEFDISGEFFLGGFST 401          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: D8LJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD2_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 2.760e-92
Identity = 157/305 (51.48%), Postives = 207/305 (67.87%), Query Frame = 1
Query:  124 VILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSE--GQTNFLVVKLSGTDGSVLWEYSPVSFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGGYTS 1032
            VILGG+  G+W A+N +G+R +AAVKL+   G EVWR+Q  A  S S      YG   +  VAVD  +N  LVG TYNSLVDG G PGD D+F IK+DGV+G E++ VQGG++F  + L  AKVD +GD+VAAG + +E   + NFLVVKLSG+DGSVLWEY+P + +  V H+VD+DD+ +VYV+GGE A N  G +  + VV+KL   +G   W Y G      +  S++ DP TGWVVGAG  +G W+ G +QGG DFAAVVLDGD G EL R+Q+GT G D ++F  FD +G  F GG+++
Sbjct:   29 VILGGFTNGEWGASNLDGLRDIAAVKLDGEAGTEVWRYQAAASTSSSGG----YGVSYVLGVAVDSTNNPVLVGTTYNSLVDGVGVPGDWDFFAIKLDGVTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSTASGGVFHSVDLDDRSHVYVAGGEGAPNFQGKVGTTAVVLKLDGESGVERWSYRGTGGDGIMLNSIAADPITGWVVGAGGAQGDWVEGASQGGFDFAAVVLDGDSGAELTRWQDGTLGDDVLEFVEFDISGEFFLGGFST 329          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: A0A6H5LD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD60_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 9.290e-69
Identity = 143/314 (45.54%), Postives = 174/314 (55.41%), Query Frame = 1
Query:   73 GEQLEIIFGADTDSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWEYSPV-SFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGAL 1011
            G + ++ F A TDSNN +ILGG   G W                 SST +    +   A+ + S +                        G T   LV GEG  GD D+F  K+DG  G+EI+T QGG S  +D+     V+  GD+VA G SG     +  VVKLSG DG VLWEYSPV S T DV H+VDVD Q +V V G  DA N  G+  E+PVV+KL  A G + W Y G  TS   F+ ++VD TTGWVVGAG+TEGTW+ G AQGG D AAV+LDG  G EL RYQNGT   D + FAGFDSAG  
Sbjct:   53 GSEADVFFAAATDSNNGIILGGRTEGYW----------------SSSTPELCLVWPSTAKTTASCS------------------------GQTSGCLVYGEGDAGDCDFFATKLDGTDGSEIWTTQGGASTSFDSFREVVVESTGDLVAVGISGDVYAISIFVVKLSGIDGIVLWEYSPVTSLTHDVPHSVDVDAQDDVNVVGVYDALNLQGSTAETPVVLKLDGATGDVGWTYEGMATSGDGFYDLAVDLTTGWVVGAGWTEGTWVTGAAQGGYDVAAVLLDGVTGNELGRYQNGTTDDDYLAFAGFDSAGGF 326          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: A0A7C7JEC3_9FLAO (Uncharacterized protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7JEC3_9FLAO)

HSP 1 Score: 67.8 bits (164), Expect = 9.930e-9
Identity = 72/251 (28.69%), Postives = 118/251 (47.01%), Query Frame = 1
Query:  307 VAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTS-----GSEGQTNFLVVKLSGTDGSVLWEYSPVSFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVM--KLSSANGALEWMYS-GATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGGYTSG 1035
            +AVD  DN+ + G T ++L   +   G  D+ +IK    S  +++  Q G S + D  Y   VD   DV  +G +     G  G  + +VVKL G+DGS++W     + ++D   ++ +D   ++ + GG    +    I  S  V   K+ S+NG+L + Y  G++ +  V  +  +  +   V+  GYTEG+ L   +QG  D     L+G     L   QNGT+  D +     D    +F  G T G
Sbjct:  203 LAVDSQDNIIIGGETLSNLFPDD--EGSSDFVVIKYSS-SLDQMWGWQNGSSTN-DYTYGVAVDSQDDVYVSGYTTGVWFGDIGNNDIIVVKLQGSDGSLIWGERFGTTSLDYSSSLSIDSNDDLMI-GGRTFSSWFSTIQGSFDVFAFKVDSSNGSLMFGYQDGSSNNERV--NDLIPNSNNDVIITGYTEGS-LYSTSQGMDDIFLAKLNGSDFSVLNSVQNGTNSVDQVNSVSVDLNDDIFITGLTYG 445          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: UPI001685D0D8 (SBBP repeat-containing protein n=1 Tax=Anabaena catenula TaxID=1296320 RepID=UPI001685D0D8)

HSP 1 Score: 62.0 bits (149), Expect = 8.500e-7
Identity = 84/318 (26.42%), Postives = 138/318 (43.40%), Query Frame = 1
Query:  109 DSNNDVILGGYATGDWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAG-TSGSEGQTNF-----LVVKLSGTDGSVLWEYSPVSFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAIT---ESPVVMKLSSANGALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDFAAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGGYTSG 1035
            DSN++V L GY TG+   TN     + A V    ++G   W+ Q +   S  ++            +A+D + N +L G TY +L  G    G  D ++ K +  SGT  +  Q G S   D+ Y   VD   ++   G T G+ G TN       V K + + G++ W+    S + D  + +D+D  GN+Y++G  +    LG      +   + K S++ G L+W     T S      +++D  +G++   G T G   +G+   G     +      G  L + Q GT   DG      D+   ++  G T G
Sbjct:  164 DSNSNVYLTGYTTGNLSGTNVG--EYDAWVAKYDTSGTLQWK-QQIGTPSYDSSM----------GIAIDSNSNFYLTGYTYGNL--GGTNAGSYDAWVAKYNS-SGTLQWKQQLGTSGD-DSTYGIAVDVNSNIYLTGYTQGNLGGTNAGDYDAWVAKYNNS-GTLQWKQQLGSDSFDAAYDLDLDSSGNIYLTG--ETYGNLGGTNAGIDDAWIAKYSNS-GTLQWKEQLGTPSYDYSNDIAID-NSGYIYITGSTNGN--LGDTSFGNYDGWIARYDSSGTLLGKEQIGTADSDGSSAITIDANNNIYLTGVTYG 457          
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Match: A0A1F6C6E9_HANXR (Uncharacterized protein n=1 Tax=Handelsmanbacteria sp. (strain RIFCSPLOWO2_12_FULL_64_10) TaxID=1817868 RepID=A0A1F6C6E9_HANXR)

HSP 1 Score: 60.8 bits (146), Expect = 2.180e-6
Identity = 55/209 (26.32%), Postives = 93/209 (44.50%), Query Frame = 1
Query:  211 STGDEVW--RFQDVAQDSMSTTFYTIYGSGTIADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQGGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWE--YSPVSFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSANGALEW--MYSGATTSRTVFWSVSVD 819
            S G+  W  R+   A ++      +I GSG           NV++ GG++N          + DY  +K D            G +   +   +  VD +G+V   G S +   +++L +K   + G+++WE  Y+  +   D  HA+ VD  GNVYV+G  D  +    +T     +K  S  G L W   Y+G+  +R   +++SVD
Sbjct:  183 SAGNLAWERRYNGAANNNDGAYALSIDGSG-----------NVYVTGGSWNG--------SNFDYLTLKYDSAGNLAWERRYNGPANSHELAKSLSVDGSGNVYVTGESENASNSDYLTLKYD-SGGNLVWERRYNGPTNNFDSAHALSVDGNGNVYVTGSSDNGSNFDYLT-----LKYDSG-GNLVWERRYNGSANNRDEAYTLSVD 365          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140935.2837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LJD0_ECTSI1.590e-12157.10Fibronectin type III domain protein n=1 Tax=Ectoca... [more]
A0A6H5KD80_9PHAE2.470e-11956.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKX8_ECTSI9.970e-11755.69Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D8LJC9_ECTSI1.850e-11454.81Fibronectin type III domain protein n=1 Tax=Ectoca... [more]
A0A6H5JLD3_9PHAE6.050e-9749.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJD2_ECTSI2.760e-9251.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LD60_9PHAE9.290e-6945.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7C7JEC3_9FLAO9.930e-928.69Uncharacterized protein (Fragment) n=1 Tax=Flavoba... [more]
UPI001685D0D88.500e-726.42SBBP repeat-containing protein n=1 Tax=Anabaena ca... [more]
A0A1F6C6E9_HANXR2.180e-626.32Uncharacterized protein n=1 Tax=Handelsmanbacteria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig140935contigH-elongata_contig140935:227..1261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score75.1
Seed ortholog evalue7.2e-11
Seed eggNOG ortholog448385.sce6598
EggNOG free text desc.Beta-propeller repeat
EggNOG OGs1P31B@1224,2WRBJ@28221,2Z0FT@29,42VDF@68525,COG1520@1,COG1520@2
COG Functional cat.S
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1037
Cds size1035
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929837.4090018-CDS-H-elongata_contig140935:226..12611622929837.4090018-CDS-H-elongata_contig140935:226..1261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig140935 227..1261 +
1691679177.6954682-CDS-H-elongata_contig140935:226..12611691679177.6954682-CDS-H-elongata_contig140935:226..1261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig140935 227..1261 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig140935.2837.1prot_H-elongata_contig140935.2837.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig140935 227..1261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig140935.2837.1

>prot_H-elongata_contig140935.2837.1 ID=prot_H-elongata_contig140935.2837.1|Name=mRNA_H-elongata_contig140935.2837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
AAVKLAGASGFVAWDWTDQSTGLYGEQLEIIFGADTDSNNDVILGGYATG
DWDATNKNGVRHLAAVKLESSTGDEVWRFQDVAQDSMSTTFYTIYGSGTI
ADVAVDDDDNVFLVGGTYNSLVDGEGYPGDRDYFIIKIDGVSGTEIFTVQ
GGLSFHWDALYAAKVDFAGDVVAAGTSGSEGQTNFLVVKLSGTDGSVLWE
YSPVSFTIDVLHAVDVDDQGNVYVSGGEDADNRLGAITESPVVMKLSSAN
GALEWMYSGATTSRTVFWSVSVDPTTGWVVGAGYTEGTWLVGEAQGGIDF
AAVVLDGDIGEELARYQNGTDGRDGIKFAGFDSAGALFFGGYTSG
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mRNA from alignment at H-elongata_contig140935:227..1261+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig140935.2837.1 ID=mRNA_H-elongata_contig140935.2837.1|Name=mRNA_H-elongata_contig140935.2837.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1035bp|location=Sequence derived from alignment at H-elongata_contig140935:227..1261+ (Himanthalia elongata Himel1 dioecious)
GCGGCGGTAAAACTGGCGGGGGCATCGGGATTTGTAGCATGGGATTGGAC CGATCAGTCTACCGGATTATATGGGGAACAGCTTGAAATCATTTTTGGCG CAGATACAGATAGTAACAACGACGTGATCTTGGGAGGTTATGCCACGGGA GACTGGGATGCCACCAATAAAAACGGCGTGAGACACTTGGCGGCGGTGAA GCTCGAGAGCAGCACGGGAGACGAAGTATGGCGCTTCCAGGACGTCGCCC AAGATTCGATGTCGACAACATTTTACACTATCTATGGGTCGGGCACCATT GCAGACGTAGCTGTGGATGACGACGACAACGTATTCCTGGTTGGAGGCAC CTACAACAGCTTGGTCGATGGTGAGGGGTACCCTGGTGACCGCGATTACT TTATTATAAAGATTGACGGGGTGTCTGGAACCGAGATCTTCACTGTTCAG GGAGGGCTCTCATTCCACTGGGATGCCCTATATGCTGCTAAGGTAGACTT TGCCGGAGATGTTGTTGCGGCGGGTACATCGGGCTCCGAAGGGCAAACCA ACTTTCTTGTGGTTAAACTGAGTGGCACCGACGGCAGCGTTCTCTGGGAA TACTCGCCAGTTTCCTTCACCATCGACGTGCTCCATGCGGTCGACGTCGA TGACCAGGGCAATGTGTACGTATCTGGTGGAGAAGACGCCGACAACAGGC TGGGAGCGATAACCGAATCCCCTGTCGTGATGAAGCTTTCCAGCGCCAAC GGCGCTCTGGAGTGGATGTACTCGGGGGCGACCACATCGAGAACCGTTTT TTGGAGCGTTTCTGTCGATCCGACAACGGGCTGGGTTGTGGGCGCTGGGT ACACGGAAGGGACGTGGTTGGTGGGAGAAGCTCAAGGTGGAATCGATTTC GCTGCTGTCGTACTTGACGGCGATATAGGAGAAGAGCTCGCCCGCTATCA AAATGGAACGGACGGTAGAGACGGCATCAAATTTGCGGGATTCGATTCTG CGGGGGCACTATTCTTTGGAGGATATACATCCGGA
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Coding sequence (CDS) from alignment at H-elongata_contig140935:227..1261+

>mRNA_H-elongata_contig140935.2837.1 ID=mRNA_H-elongata_contig140935.2837.1|Name=mRNA_H-elongata_contig140935.2837.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig140935:227..1261+ (Himanthalia elongata Himel1 dioecious)
GCGGCGGTAAAACTGGCGGGGGCATCGGGATTTGTAGCATGGGATTGGAC
CGATCAGTCTACCGGATTATATGGGGAACAGCTTGAAATCATTTTTGGCG
CAGATACAGATAGTAACAACGACGTGATCTTGGGAGGTTATGCCACGGGA
GACTGGGATGCCACCAATAAAAACGGCGTGAGACACTTGGCGGCGGTGAA
GCTCGAGAGCAGCACGGGAGACGAAGTATGGCGCTTCCAGGACGTCGCCC
AAGATTCGATGTCGACAACATTTTACACTATCTATGGGTCGGGCACCATT
GCAGACGTAGCTGTGGATGACGACGACAACGTATTCCTGGTTGGAGGCAC
CTACAACAGCTTGGTCGATGGTGAGGGGTACCCTGGTGACCGCGATTACT
TTATTATAAAGATTGACGGGGTGTCTGGAACCGAGATCTTCACTGTTCAG
GGAGGGCTCTCATTCCACTGGGATGCCCTATATGCTGCTAAGGTAGACTT
TGCCGGAGATGTTGTTGCGGCGGGTACATCGGGCTCCGAAGGGCAAACCA
ACTTTCTTGTGGTTAAACTGAGTGGCACCGACGGCAGCGTTCTCTGGGAA
TACTCGCCAGTTTCCTTCACCATCGACGTGCTCCATGCGGTCGACGTCGA
TGACCAGGGCAATGTGTACGTATCTGGTGGAGAAGACGCCGACAACAGGC
TGGGAGCGATAACCGAATCCCCTGTCGTGATGAAGCTTTCCAGCGCCAAC
GGCGCTCTGGAGTGGATGTACTCGGGGGCGACCACATCGAGAACCGTTTT
TTGGAGCGTTTCTGTCGATCCGACAACGGGCTGGGTTGTGGGCGCTGGGT
ACACGGAAGGGACGTGGTTGGTGGGAGAAGCTCAAGGTGGAATCGATTTC
GCTGCTGTCGTACTTGACGGCGATATAGGAGAAGAGCTCGCCCGCTATCA
AAATGGAACGGACGGTAGAGACGGCATCAAATTTGCGGGATTCGATTCTG
CGGGGGCACTATTCTTTGGAGGATATACATCCGGAGCGGCGGTAAAACTG
GCGGGGGCATCGGGATTTGTAGCATGGGATTGGACCGATCAGTCTACCGG
ATTATATGGGGAACAGCTTGAAATCATTTTTGGCGCAGATACAGATAGTA
ACAACGACGTGATCTTGGGAGGTTATGCCACGGGAGACTGGGATGCCACC
AATAAAAACGGCGTGAGACACTTGGCGGCGGTGAAGCTCGAGAGCAGCAC
GGGAGACGAAGTATGGCGCTTCCAGGACGTCGCCCAAGATTCGATGTCGA
CAACATTTTACACTATCTATGGGTCGGGCACCATTGCAGACGTAGCTGTG
GATGACGACGACAACGTATTCCTGGTTGGAGGCACCTACAACAGCTTGGT
CGATGGTGAGGGGTACCCTGGTGACCGCGATTACTTTATTATAAAGATTG
ACGGGGTGTCTGGAACCGAGATCTTCACTGTTCAGGGAGGGCTCTCATTC
CACTGGGATGCCCTATATGCTGCTAAGGTAGACTTTGCCGGAGATGTTGT
TGCGGCGGGTACATCGGGCTCCGAAGGGCAAACCAACTTTCTTGTGGTTA
AACTGAGTGGCACCGACGGCAGCGTTCTCTGGGAATACTCGCCAGTTTCC
TTCACCATCGACGTGCTCCATGCGGTCGACGTCGATGACCAGGGCAATGT
GTACGTATCTGGTGGAGAAGACGCCGACAACAGGCTGGGAGCGATAACCG
AATCCCCTGTCGTGATGAAGCTTTCCAGCGCCAACGGCGCTCTGGAGTGG
ATGTACTCGGGGGCGACCACATCGAGAACCGTTTTTTGGAGCGTTTCTGT
CGATCCGACAACGGGCTGGGTTGTGGGCGCTGGGTACACGGAAGGGACGT
GGTTGGTGGGAGAAGCTCAAGGTGGAATCGATTTCGCTGCTGTCGTACTT
GACGGCGATATAGGAGAAGAGCTCGCCCGCTATCAAAATGGAACGGACGG
TAGAGACGGCATCAAATTTGCGGGATTCGATTCTGCGGGGGCACTATTCT
TTGGAGGATATACATCCGGA
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