mRNA_H-elongata_contig140457.2808.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 9.790e-19 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVRNAWPTV 207
+PL WW++ D+P LANLAR VLAIPA+QA SERLFS G I++K RN L+P V+LLV +R++W V
Sbjct: 222 DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIV 290
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 9.150e-16 Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVRNAWPTV 207
NPL W+ + +YPLLA LAR VLAIP+SQA SER+FS+ GL ++ R+RL E V+LLV++RN W V
Sbjct: 482 NPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVV 550
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 72.8 bits (177), Expect = 4.020e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVF 183
NPL WWK N+ +P LA+LA+ L +PA+ SERLFSS G I+SK+R LSPE + +L F
Sbjct: 32 NPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTF 92
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: UPI00165AB501 (zinc finger BED domain-containing protein 1-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165AB501) HSP 1 Score: 76.6 bits (187), Expect = 4.410e-15 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFV 186
NPL+WWK+NK++YPLLA LARH L +P + +SER+FS+ G I++ +R+ LS + V L+F+
Sbjct: 215 NPLIWWKLNKREYPLLARLARHYLCVPGTSIASERVFSTAGDIVTAKRSCLSTDHVNELIFL 276
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.480e-14 Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 34 DYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVRNAWPTV 207
D+P LANLAR VLAIPA+QA SERLFS G I++K RN L+P V+LLV +R++W V
Sbjct: 153 DFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIV 210
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: UPI001C15BA5C (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C15BA5C) HSP 1 Score: 75.5 bits (184), Expect = 2.000e-14 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 4 PLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVRNAWPTVGSL 216
PL+WWK NK +P+L+ LAR LAIPA+ SERLFS G +++ +R +L P ++ LVF + W VG +
Sbjct: 272 PLLWWKTNKAQFPILSKLARKYLAIPATSTPSERLFSEAGNVVTIKRTQLLPNTLENLVFCKKNWRLVGGV 342
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: A0A1A8CIX7_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CIX7_9TELE) HSP 1 Score: 70.5 bits (171), Expect = 2.470e-14 Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVR 189
+PL WWK+N YP+LA+LA+ L IPA+ SER+FS+ G I+S +R+ ++PE V +LVF++
Sbjct: 22 SPLEWWKVNAYAYPILASLAKAYLCIPATSVPSERVFSTAGDIVSAQRSLITPEHVDMLVFLK 84
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: A0A8B8G1X1_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8G1X1_9HEMI) HSP 1 Score: 72.8 bits (177), Expect = 2.660e-14 Identity = 31/64 (48.44%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVRN 192
NP +WWK + YP ++ LA+++L IPAS ASSER+FS+ G I++ +RNR++P + LVF++N
Sbjct: 116 NPCLWWKARENVYPKISVLAKNILCIPASSASSERVFSTAGNIITPKRNRMTPYHLSALVFLKN 179
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: UPI001F5EE810 (probable serine/threonine-protein kinase samkC n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5EE810) HSP 1 Score: 74.3 bits (181), Expect = 2.930e-14 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 7 LVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVRNAWPTVGS 213
L WWK+N+K+ PLLA +AR L P + SSERLFS GG I+S +R+ + PE +Q ++F++ +P V S
Sbjct: 54 LEWWKVNQKELPLLAAMARKYLCPPVTSCSSERLFSLGGNIISDKRHNMKPETLQKIMFIKENFPLVKS 122
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Match: UPI00109FC612 (zinc finger BED domain-containing protein 4-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI00109FC612) HSP 1 Score: 71.2 bits (173), Expect = 3.760e-14 Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRLSPEPVQLLVFVR 189
+PL WWK N+ YP LA +ARH LA+P + SER+FS+ G I++ +R+ LSPE V +L+F++
Sbjct: 66 DPLTWWKSNECKYPHLATMARHHLAVPGTSVPSERVFSTAGDIVTAKRSTLSPENVDILMFLK 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140457.2808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig140457.2808.1 >prot_H-elongata_contig140457.2808.1 ID=prot_H-elongata_contig140457.2808.1|Name=mRNA_H-elongata_contig140457.2808.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp NPLVWWKINKKDYPLLANLARHVLAIPASQASSERLFSSGGLIMSKRRNRback to top mRNA from alignment at H-elongata_contig140457:934..1149+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig140457.2808.1 ID=mRNA_H-elongata_contig140457.2808.1|Name=mRNA_H-elongata_contig140457.2808.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=216bp|location=Sequence derived from alignment at H-elongata_contig140457:934..1149+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig140457:934..1149+ >mRNA_H-elongata_contig140457.2808.1 ID=mRNA_H-elongata_contig140457.2808.1|Name=mRNA_H-elongata_contig140457.2808.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at H-elongata_contig140457:934..1149+ (Himanthalia elongata Himel1 dioecious)back to top |