mRNA_H-elongata_contig139951.2781.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: D7G165_ECTSI (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G165_ECTSI) HSP 1 Score: 174 bits (442), Expect = 7.640e-50 Identity = 82/108 (75.93%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 1 VEVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
V VPNL +KF PSG NL+I +DS G VT Y KLIG+ D+VLY+HVRGPGR P K FLRAGPRASLHFKPT+VRAAVVTCGGLCPGLNSVIHH+V TL NIY+AEKV
Sbjct: 188 VPVPNLKTKFKPSGVANLDIASDSLGSVTHYTKLIGEQDIVLYEHVRGPGRMPAAKGFLRAGPRASLHFKPTEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYDAEKV 295
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A6H5KDC4_9PHAE (PFK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC4_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.830e-48 Identity = 82/108 (75.93%), Postives = 89/108 (82.41%), Query Frame = 1
Query: 1 VEVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
V VPNL +KF PSG NL+I +DS G VT Y KLIG+ D+VLYDHVRGPGR P K FLRAGPRASLHFKP +VRAAVVTCGGLCPGLNSVIHH+V TL NIY AEKV
Sbjct: 225 VPVPNLKTKFKPSGVANLDIASDSLGKVTHYTKLIGEKDIVLYDHVRGPGRMPAAKGFLRAGPRASLHFKPEEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYGAEKV 332
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A6H5K8I7_9PHAE (PFK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8I7_9PHAE) HSP 1 Score: 138 bits (348), Expect = 7.560e-37 Identity = 66/110 (60.00%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 4 EVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLY---DHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
EVPNL+ KFP S PN EIT ++QG T Y KL+G D ++Y HVR + PT KAFLRAGPR LHF PT+VR A+VTCGGLCPGLNSV+HH+V T+ Y A+KV
Sbjct: 3 EVPNLNVKFPSSLAPNREITVNTQGSPTCYNKLLGPRDCIIYGECQHVRDKNKPPTAKAFLRAGPRPELHFNPTEVRGAIVTCGGLCPGLNSVVHHLVETMLVTYKADKV 112
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A835ZIU1_9STRA (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU1_9STRA) HSP 1 Score: 136 bits (342), Expect = 9.770e-36 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 4 EVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
+VPNL+ + P +G N EI +S G T Y KL+GD+D ++Y+HVR ++P +AFLRAGPRA LHF PT V A +VTCG LCPGLNSVIHH+V TL N YNA K+
Sbjct: 50 QVPNLALRMPTAGVANHEIVKNSSGGSTFYNKLLGDEDCIIYEHVRDKTKAPVARAFLRAGPRAKLHFDPTTVNACIVTCGLLCPGLNSVIHHLVDTLKNNYNAGKI 156
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A835YV15_9STRA (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV15_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.040e-35 Identity = 63/107 (58.88%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 4 EVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
+VP LS+K P +G PNLEI +++ G T Y +L GD + ++ +HVR ++P KAFLRAGPRA LHF P KV AAVVTCG LCPGLNSVIHH+ TL IY A+KV
Sbjct: 50 QVPRLSAKLPSAGVPNLEIKSNTSGQPTYYNRLTGDTECIIDEHVRDERKAPVAKAFLRAGPRAKLHFDPVKVNAAVVTCGTLCPGLNSVIHHLRDTLTTIYGAQKV 156
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A836C7Q7_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q7_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.370e-28 Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 4 EVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
EVPNL+ FPP N +T S G + + +L+G D +L +HV GPG++ +KA LRAGPR LHF P + AA+VTCGGLCPGLNSVIH++ TL Y A +V
Sbjct: 20 EVPNLNEAFPPCNMRNDCMTQQSTGEPSLWNRLLGPRDCILLEHVCGPGKARKLKALLRAGPRPLLHFPPKETVAAIVTCGGLCPGLNSVIHYVTETLLQNYGARRV 126
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: H6WB78_VAULI (Pyrophosphate-dependant phosphofructokinase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB78_VAULI) HSP 1 Score: 109 bits (273), Expect = 7.660e-26 Identity = 54/107 (50.47%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 4 EVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
+V NLS F S N + +S G + + +L+G+ D VL+D + GP R P +AFLRAGPR LHF+P AA+VTCGGLCPGLNSVIHH+ TL Y A++V
Sbjct: 63 KVQNLSDDFSSSEIKNDLMVQESSGESSYWNRLVGELDCVLFDVICGPDRPPQKQAFLRAGPRPVLHFEPKNTVAAIVTCGGLCPGLNSVIHHLTETLVRNYKAKRV 169
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A7S3M864_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M864_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.280e-25 Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 4 EVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
E+ +L + F +G PN+ + + + Y K++GD+D +L + R + AFLRAGPRA LHF+PTKVRAAVVTCGGLCPGLNSVI +V +L+ Y AE V
Sbjct: 86 EIKSLRTSFQSAGVPNVPMGSTKN---SNYNKIMGDEDFILNEIKRKHTGRGSSDAFLRAGPRAVLHFEPTKVRAAVVTCGGLCPGLNSVIRELVHSLYYNYGAEAV 189
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: A0A8J5XCF4_DIALT (Rhodanese domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCF4_DIALT) HSP 1 Score: 107 bits (267), Expect = 6.410e-25 Identity = 56/108 (51.85%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 7 VPNLSSKFPPSGEPN-LEI-TADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEKV 324
VP+LS + PN + I A+ + + Y KL+GD DV+++D VR P P A+LRAGPR HF P KVRAA+VTCGGLCPGLN+VI IV L ++Y AEKV
Sbjct: 111 VPHLSDYHEGADLPNRMGIGCANKEELQQSYNKLMGDQDVIIHDIVRKPNADPVTTAYLRAGPRDVTHFNPCKVRAAIVTCGGLCPGLNNVIQGIVRALISLYGAEKV 218
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Match: K8Z818_NANGC (6-phosphofructo-2-kinase / fructose-2,6-bisphosphatase (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z818_NANGC) HSP 1 Score: 106 bits (265), Expect = 1.090e-24 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 1 VEVPNLSSKFPPSGEPNL-EITADSQGIVTRYRKLIGDDDVVLYDHVRGPGRSPTVKAFLRAGPRASLHFKPTKVRAAVVTCGGLCPGLNSVIHHIVSTLHNIYNAEK 321
+E+PNL F + NL +++ + G Y KL+G D ++ D VR G P K ++RAGPR LHF+P KVRAA+VTCGGLCPGLN+VI +V++L ++Y A+
Sbjct: 91 LEIPNLGKTFKGAHVQNLSQMSGTTSGESIAYNKLLGHQDGIIADIVRREGLPPETKVYVRAGPRKELHFEPEKVRAAIVTCGGLCPGLNNVIRELVNSLFHLYRAQS 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139951.2781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig139951.2781.1 >prot_H-elongata_contig139951.2781.1 ID=prot_H-elongata_contig139951.2781.1|Name=mRNA_H-elongata_contig139951.2781.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp VEVPNLSSKFPPSGEPNLEITADSQGIVTRYRKLIGDDDVVLYDHVRGPGback to top mRNA from alignment at H-elongata_contig139951:550..1552+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig139951.2781.1 ID=mRNA_H-elongata_contig139951.2781.1|Name=mRNA_H-elongata_contig139951.2781.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1003bp|location=Sequence derived from alignment at H-elongata_contig139951:550..1552+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig139951:550..1552+ >mRNA_H-elongata_contig139951.2781.1 ID=mRNA_H-elongata_contig139951.2781.1|Name=mRNA_H-elongata_contig139951.2781.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at H-elongata_contig139951:550..1552+ (Himanthalia elongata Himel1 dioecious)back to top |