mRNA_H-elongata_contig1388.2705.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: D8LH39_ECTSI (DNA replication licensing factor MCM2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH39_ECTSI) HSP 1 Score: 361 bits (927), Expect = 2.860e-116 Identity = 184/194 (94.85%), Postives = 190/194 (97.94%), Query Frame = 1
Query: 1 GEGTIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNPPASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKIIKTF 582
GEGTIPQHLLRKYIMYARN++RPQLHNIDQDKVARLY+DLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQK+SVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNPP SLEVEMDDLESKAGEFGIYDLSGFY S+LFK+KRLS KQRRKIIKTF
Sbjct: 771 GEGTIPQHLLRKYIMYARNSIRPQLHNIDQDKVARLYSDLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKISVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNPPESLEVEMDDLESKAGEFGIYDLSGFYQSKLFKDKRLSTDKQRRKIIKTF 964
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A7S2MBZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBZ3_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.920e-67 Identity = 112/194 (57.73%), Postives = 145/194 (74.74%), Query Frame = 1
Query: 10 TIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNP---PASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKIIKTF 582
IPQ LL+KYI+YAR N+RPQL ID+DK+A+LYADLRRES+ GGVPIAVRHIESVMRMAEA A+MHLR+ VREDDV+ AI +L+SFIQAQK SVR++++R F YL+ D+ LLL LQ + +D QTY++LR N P SLEV ++DLE +A E+ +YDLS FY S F + + ++R+ II+ F
Sbjct: 45 AIPQDLLQKYILYARKNVRPQLEGIDEDKIAQLYADLRRESAKCGGVPIAVRHIESVMRMAEAHAKMHLRDHVREDDVNTAIRVMLDSFIQAQKFSVRKSMQRQFEPYLSQNRDYNELLLHALQVLTKDAQTYHQLRTGNREQLPDSLEVHVEDLEGRAREYKVYDLSDFYKSASFSDNGFELDEERKVIIRRF 238
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A7S1TVB0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVB0_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.690e-64 Identity = 114/189 (60.32%), Postives = 136/189 (71.96%), Query Frame = 1
Query: 13 IPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHS--NPPASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKII 573
+ Q LLRKYIMYARN +RPQLH IDQDK+ RLYA++R+ES +SGGVPIAVRHIESVMRMAEA ARMHLR+ VR+DDVD AI +LESFIQAQK SVRR+L R FR+YL D+ LLL LQ + RD Q Y R ++ + P +EV +DLE KA E IYDL+ FY S LF+ RR I+
Sbjct: 99 LDQALLRKYIMYARNFVRPQLHGIDQDKLGRLYAEMRKESMSSGGVPIAVRHIESVMRMAEAHARMHLRDQVRDDDVDTAIRVMLESFIQAQKFSVRRSLARSFRRYLTHNRDYNELLLHALQGLVRDVQKYQRFKYRGMHEPDRIEVLCEDLEQKARECNIYDLTDFYQSPLFQRHNFRHDAARRVIV 287
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A7S4KRA2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KRA2_GUITH) HSP 1 Score: 186 bits (472), Expect = 1.810e-56 Identity = 98/182 (53.85%), Postives = 127/182 (69.78%), Query Frame = 1
Query: 1 GEGTIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHS---NPPASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEK 537
GEG IPQ LL+KYI+YA+ ++RP++ ID DKV +LYA+LRRES A GG+PIAVRH+ES++RM+E+ ARMHLRE VR+DDV++AI +L+SFI +QK SV+R LRR F +YLA D LLL LQ M RDE Y R R+ ++VE D E +A G+ FYAS+LF K
Sbjct: 12 GEGPIPQSLLKKYIVYAKKHVRPKISQIDSDKVTKLYAELRRESEAGGGIPIAVRHVESIIRMSESFARMHLREIVRDDDVNLAIRVMLDSFISSQKYSVQRNLRRSFHRYLAFQKDNNELLLYILQAMVRDELQYTRSRNFLRLQEEEEVKVEQQDFEQRAKNIGVRQFHDFYASQLFSSK 193
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: W7TL79_9STRA (DNA replication licensing factor MCM2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL79_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.300e-54 Identity = 101/184 (54.89%), Postives = 131/184 (71.20%), Query Frame = 1
Query: 10 TIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNPPA----SLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSV 549
T Q LL KYIMYAR+N+RPQ+ ++DQDK+ RLY DLRRES GGVPIAVRHIES++RM+EA A+MHLR+ VR+DDV+VAI+ +L SF+QAQK SVR +L RGFR+Y+ +DF LL+ ELQK+ RD TY +R P +LEV + +LE +A E IYD+ F +F+ L V
Sbjct: 730 TPSQRLLTKYIMYARSNVRPQIQDVDQDKIERLYVDLRRESKQCGGVPIAVRHIESIIRMSEAHAKMHLRDHVRDDDVNVAISLMLHSFLQAQKFSVRTSLERGFRRYITRTTDFNQLLMSELQKLMRDNLTYDMMRRGRNPEDEEPTLEVPLSELEERAAELRIYDIRPFLQGEMFRGHGLVV 913
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A822B066_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822B066_9NEOB) HSP 1 Score: 181 bits (458), Expect = 1.240e-53 Identity = 96/194 (49.48%), Postives = 135/194 (69.59%), Query Frame = 1
Query: 1 GEGTIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNPPASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKIIKTF 582
G +PQ +L+KYI+YA+ + P+L+ +DQDKVA++Y+DLR+ES A+G +PI VRHIES++RMAEA ARMHLR+ V EDDV++AI +LESFI QK SV R++R+ F +YLA D LLL L+++ ++ TY R R+ S+EV DL KA + I++LS FY S LFK R S +++ II+ F
Sbjct: 69 GVEPLPQEVLKKYIIYAKEKVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLAFRRDNNELLLFILKQLVAEQVTYQRNRYGAQQDSIEVSEKDLVDKARQINIHNLSAFYDSELFKMNRFSHDVKKKLIIQQF 262
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A2T9YHE2_9FUNG (DNA replication licensing factor MCM2 n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YHE2_9FUNG) HSP 1 Score: 192 bits (489), Expect = 1.640e-53 Identity = 97/191 (50.79%), Postives = 140/191 (73.30%), Query Frame = 1
Query: 13 IPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNP-PASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKIIKTF 582
I Q LL+KYIMYAR N+ P+ +D DKV++LYA+LR+ES A+G +PI VRHIES++R++EARARMHLRE+VR DD+DVAI L+SFI AQK+SV + L+R F KYL SDF LL + L+K+ +++ T+Y+ ++ PA +E+ D+LES+A IY ++ FY+S+L K + + + +R I+KTF
Sbjct: 735 ISQELLKKYIMYARENVTPKFQKVDYDKVSQLYAELRKESMATGSIPITVRHIESIVRLSEARARMHLRENVRSDDLDVAIKLSLDSFISAQKLSVAKQLKRSFAKYLTVSSDFDELLYMILRKLVQEKVTFYQFKNQGAFPAVIEISFDELESQAKSSQIYSVNSFYSSKLLKAQGFIIDRSQRVILKTF 925
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A7S0DKW9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DKW9_9EUKA) HSP 1 Score: 178 bits (452), Expect = 3.340e-53 Identity = 90/196 (45.92%), Postives = 130/196 (66.33%), Query Frame = 1
Query: 4 EGTIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNP------PASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKII 573
+ I Q +LRKYI+YAR +P+LHNID D++++LY++LRRES SGG+PIA RHIES++RM+EA A+MHLRE V DD+D+AI+ +LE FI QK SV+RAL+R F+ YL D F LL L ++ R++ Y +L + +++ M+D E++A E I D++ FY SR FK K + K + I+
Sbjct: 24 KSRINQEMLRKYILYARQTCKPKLHNIDDDRISKLYSELRRESMNSGGIPIATRHIESIIRMSEAHAKMHLREYVNSDDIDMAISCMLEGFISTQKFSVKRALQRHFQSYLNFKKDTFQLLKFTLDELIREQANYQKLTNGEDGEFDPYDEPVKISMEDFEARARELNIPDVTNFYKSRAFKNKEYQLDKTSQLIV 219
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: K0TQW8_THAOC (MCM domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQW8_THAOC) HSP 1 Score: 182 bits (461), Expect = 6.470e-53 Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 13 IPQHLLRKYIMYARNNLRPQLHN--IDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNP-------PASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKIIKTF 582
IPQ LL+KYI YAR N RP L DQ+K+A LY LR+ES++SGGVPIAVRHIES+MRMAEA A+MHLR+ VR+DD+D +I+ +LESFI AQK SVRR+LRR F KY++ D LLL LQ M R+E Y ++ P LEV +D+ E +A + IYD++ F + F+E S+ +RR I+++F
Sbjct: 159 IPQSLLKKYIQYARANCRPALRGGTFDQEKIASLYVQLRKESTSSGGVPIAVRHIESIMRMAEAHAKMHLRDYVRDDDMDASISMMLESFITAQKFSVRRSLRRSFAKYMSSGEDRVHLLLHILQDMMRNEAMYQTVKRQQQGRNADDLPEVLEVPLDEFEGRARDRRIYDVAEFCRGQAFEEAGYSLDTRRRLIVRSF 357
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Match: A0A167Q2C7_PHYB8 (DNA replication licensing factor MCM2 n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167Q2C7_PHYB8) HSP 1 Score: 190 bits (482), Expect = 1.350e-52 Identity = 96/190 (50.53%), Postives = 135/190 (71.05%), Query Frame = 1
Query: 13 IPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVPIAVRHIESVMRMAEARARMHLRESVREDDVDVAIATILESFIQAQKVSVRRALRRGFRKYLADPSDFFALLLVELQKMFRDEQTYYRLRHSNPPASLEVEMDDLESKAGEFGIYDLSGFYASRLFKEKRLSVSKQRRKIIKTF 582
IPQ LLRKYIMYAR + P+L +D+DK++RLY++LRRES ASG +PI VRH+ES++RMAEA A+MHLRE VR DDVD+AI L+SFI AQK S+ +ALR+ F KY+ + D LLL L + ++++ Y+LR+ P+ + V M +LE+KA + I+DL F SRLF++ R + + +IIK +
Sbjct: 708 IPQDLLRKYIMYAREKIHPKLQQVDEDKLSRLYSELRRESLASGSIPITVRHLESMIRMAEANAKMHLREYVRSDDVDMAITVALDSFISAQKFSMMKALRKRFAKYIVNLHDRDELLLATLDSICKEKRRLYQLRYKRLPSDISVAMSELENKARDMHIHDLQPFLHSRLFEQNRYKLEPSKGEIIKVY 897 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1388.2705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1388.2705.1 >prot_H-elongata_contig1388.2705.1 ID=prot_H-elongata_contig1388.2705.1|Name=mRNA_H-elongata_contig1388.2705.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp GEGTIPQHLLRKYIMYARNNLRPQLHNIDQDKVARLYADLRRESSASGGVback to top mRNA from alignment at H-elongata_contig1388:9163..11579+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1388.2705.1 ID=mRNA_H-elongata_contig1388.2705.1|Name=mRNA_H-elongata_contig1388.2705.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2417bp|location=Sequence derived from alignment at H-elongata_contig1388:9163..11579+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1388:9163..11579+ >mRNA_H-elongata_contig1388.2705.1 ID=mRNA_H-elongata_contig1388.2705.1|Name=mRNA_H-elongata_contig1388.2705.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig1388:9163..11579+ (Himanthalia elongata Himel1 dioecious)back to top |