mRNA_H-elongata_contig138575.2695.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: R7UJ35_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJ35_CAPTE) HSP 1 Score: 68.2 bits (165), Expect = 1.340e-13 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 SEDSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESM 204
S+D L WWA YP VA +AR L V ASS +ER+FS+GG +VT KR L+ V ++FL ++M
Sbjct: 1 SQDPLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLGGNIVTNKRTKLTSSNVDSLIFLAKNM 68
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: E2BLX1_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BLX1_HARSA) HSP 1 Score: 65.1 bits (157), Expect = 2.330e-12 Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 7 DSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESM 204
D L WW + +P +A LAR L + A+ +SERVFSVGG +VT KR L D V I+F H+++
Sbjct: 1 DPLMWWKANASQFPTLAPLARHYLNIAATETSSERVFSVGGNIVTNKRTNLLADNVRQIIFCHDNL 66
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 64.3 bits (155), Expect = 2.180e-11 Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 7 DSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESM 204
D WW K ++PH++ +AR+ L + A+S SER+FSV G +VTKKR L + V +VFL++++
Sbjct: 67 DVFEWWRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNLKPENVDMLVFLNKNL 132
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: A0A7S3PTX0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.730e-11 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 13 LGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESMKHDLW 219
L WW + R YP++ LA+ L+V A+SA SERVFSV L+ TKKR L D V +VFL E+ W
Sbjct: 95 LQWWKQNHREYPNIWMLAKRILSVPATSAPSERVFSVASLIATKKRGSLKPDNVNMLVFLKENFDLIEW 163
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: UPI00148A67FC (zinc finger BED domain-containing protein 1-like n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A67FC) HSP 1 Score: 65.9 bits (159), Expect = 7.560e-11 Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 13 LGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESMKH 210
L WW K S +P ++ LA++ L + ASS +SERVFS+GG +V+KKR LS V +FL+++MK+
Sbjct: 601 LEWWKKNSLFFPRISILAKKFLAIPASSVSSERVFSLGGQIVSKKRCRLSHSNVDLFIFLNKNMKY 666
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: A0A7S3PUA6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUA6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 7.670e-11 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 13 LGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESMKHDLW 219
L WW + R YP++ LA+ L+V A+SA SERVFSV L+ TKKR L D V +VFL E+ W
Sbjct: 162 LQWWKQNHREYPNIWMLAKRILSVPATSAPSERVFSVASLIATKKRGSLKPDNVNMLVFLKENFDLIEW 230
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: UPI000B907786 (uncharacterized protein LOC110854843 n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B907786) HSP 1 Score: 65.5 bits (158), Expect = 8.180e-11 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 SEDSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHES 201
SED L WW K +P++A LA+ L++Q +SA SER FS GL+VT +R L +V I+F+H++
Sbjct: 250 SEDVLDWWRKNEYGFPNLANLAKRFLSIQVTSAPSERAFSTAGLVVTSRRSSLHPLKVKKILFVHDN 316
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: A0A226DDY8_FOLCA (Zinc finger BED domain-containing protein 1 n=4 Tax=Folsomia candida TaxID=158441 RepID=A0A226DDY8_FOLCA) HSP 1 Score: 65.5 bits (158), Expect = 1.030e-10 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 SEDSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHES 201
SED L WW K +P++A LA+ L++Q +SA SER FS GL+VT +R L +V I+F+H++
Sbjct: 586 SEDVLDWWRKNEYGFPNLANLAKRFLSIQVTSAPSERAFSTAGLVVTSRRSSLHPLKVKKILFVHDN 652
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: UPI0014461CE7 (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI0014461CE7) HSP 1 Score: 62.4 bits (150), Expect = 2.210e-10 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 4 EDSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESM 204
E+ L WW + RVYP ++ LA++ L++ A+SA SERVFS GG +VT R L + V +VFL +++
Sbjct: 99 ENPLDWWREHQRVYPRLSKLAKKYLSIPATSAPSERVFSTGGNIVTCLRSSLKPESVDRLVFLAKNL 165
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Match: UPI00148A2F2A (zinc finger BED domain-containing protein 4-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A2F2A) HSP 1 Score: 64.3 bits (155), Expect = 2.310e-10 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 13 LGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRDGLSGDRVADIVFLHESMKH 210
L WW K S +P ++ LA+ L + ASS +SERVFS+GG +++KKR LS V +FL+++MK+
Sbjct: 282 LEWWKKNSLFFPRISILAKNFLAIPASSVSSERVFSLGGQILSKKRCRLSHSNVDLFIFLNKNMKY 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig138575.2695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig138575.2695.1 >prot_H-elongata_contig138575.2695.1 ID=prot_H-elongata_contig138575.2695.1|Name=mRNA_H-elongata_contig138575.2695.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp SEDSLGWWAKTSRVYPHVATLARECLTVQASSATSERVFSVGGLLVTKKRback to top mRNA from alignment at H-elongata_contig138575:1163..1384+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig138575.2695.1 ID=mRNA_H-elongata_contig138575.2695.1|Name=mRNA_H-elongata_contig138575.2695.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=222bp|location=Sequence derived from alignment at H-elongata_contig138575:1163..1384+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig138575:1163..1384+ >mRNA_H-elongata_contig138575.2695.1 ID=mRNA_H-elongata_contig138575.2695.1|Name=mRNA_H-elongata_contig138575.2695.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig138575:1163..1384+ (Himanthalia elongata Himel1 dioecious)back to top |