mRNA_H-elongata_contig137592.2645.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: D7G2W6_ECTSI (Putative growth-on protein GRO10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2W6_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.500e-25 Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGCQ 180
+VATFLL LAF YD+FWVF+SPQLFGESVMVKVATGGEITQDPTFCEKYPT GCQ
Sbjct: 451 KVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQ 506
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A7S2BZ12_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZ12_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.330e-17 Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGCQA 183
+VA LLS+AF YD+F+VFISP F ESVMVKVATG + T DP +CEKYPT+S CQ+
Sbjct: 56 KVAALLLSMAFLYDIFFVFISPYFFSESVMVKVATGNQPTADPDYCEKYPTDSDCQS 112
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A7S2H102_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H102_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.280e-16 Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGC 177
+VAT LL +AFFYD+F+VFISP F ESVMVKVATG + T+DP +CEKYPT+S C
Sbjct: 435 RVATLLLCMAFFYDIFFVFISPIFFTESVMVKVATGSQPTKDPDYCEKYPTDSEC 489
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A836CBZ5_9STRA (Putative growth-on protein GRO10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.060e-16 Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGC 177
+VA LLSLAF YD+FWVF+SP LF ESVMV VATGG+ T DP CEKYP GC
Sbjct: 433 RVAAVLLSLAFVYDIFWVFLSPFLFSESVMVAVATGGDSTVDPLTCEKYPDTHGC 487
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: W7TAM5_9STRA (Signal peptide peptidase-aspartyl protease family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAM5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.890e-15 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGCQAR 186
+VAT LLSLAF YD+F+VF+SP F ESVM+KVATGG D TFCEKYP + C+ R
Sbjct: 473 KVATILLSLAFLYDIFFVFLSPIFFQESVMIKVATGGAPRADETFCEKYPEDEKCRVR 530
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A8J2X1D8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1D8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.370e-14 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGCQAR 186
+VA+ LL +AF YD+F+VFISP LFGESVMV+VATG T+D +CEKYP + CQ++
Sbjct: 409 RVASLLLCMAFCYDIFFVFISPHLFGESVMVRVATGKAPTKDADYCEKYPDDKDCQSQ 466
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A7S3KYI1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYI1_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.570e-14 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 1 MNLPQVATFLLSLAFFYDVFWVFISPQLFGESVMVKVAT-GGEITQDPTFCEKYPTESGCQ 180
+N +VA+ LL +AFFYD+F+VF+SP +F +SVM+ VAT GG T DP +CEKYP +SGCQ
Sbjct: 484 LNSLKVASALLIVAFFYDIFFVFLSPLIFSKSVMIDVATSGGPPTADPLWCEKYPNDSGCQ 544
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: F0YJD8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJD8_AURAN) HSP 1 Score: 72.0 bits (175), Expect = 7.410e-14 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 MNLPQVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGCQA 183
+N +VA LLS+AF YD+F+VF+SP F ES+MVKVATG ++D +CEKYP + CQ+
Sbjct: 51 LNSLRVAAMLLSMAFCYDIFFVFLSPYFFEESIMVKVATGKGPSKDADYCEKYPADDDCQS 111
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A7S2R3L5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3L5_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.660e-13 Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 13 QVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCEKYPTESGCQA 183
+VA LLSLAF YD+F+VFISP +F +SVMVKVA+G T D FCEKYP+++ CQ+
Sbjct: 377 RVAAQLLSLAFAYDIFFVFISPAIFKQSVMVKVASGSGPTADEDFCEKYPSDADCQS 433
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Match: A0A7S0GKA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKA6_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.060e-13 Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 28 LLSLAFFYDVFWVFISPQLFGESVMVKVAT-GGEITQDPTFCEKYPTESGC 177
LL++AFFYD+F+VFI+P FG SVMV VAT GG T DP +CEKYP GC
Sbjct: 2 LLTVAFFYDIFFVFITPYFFGSSVMVAVATSGGPPTGDPMWCEKYPKSDGC 52 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137592.2645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137592.2645.1 >prot_H-elongata_contig137592.2645.1 ID=prot_H-elongata_contig137592.2645.1|Name=mRNA_H-elongata_contig137592.2645.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp MNLPQVATFLLSLAFFYDVFWVFISPQLFGESVMVKVATGGEITQDPTFCback to top mRNA from alignment at H-elongata_contig137592:1138..1323- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137592.2645.1 ID=mRNA_H-elongata_contig137592.2645.1|Name=mRNA_H-elongata_contig137592.2645.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=186bp|location=Sequence derived from alignment at H-elongata_contig137592:1138..1323- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137592:1138..1323- >mRNA_H-elongata_contig137592.2645.1 ID=mRNA_H-elongata_contig137592.2645.1|Name=mRNA_H-elongata_contig137592.2645.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=372bp|location=Sequence derived from alignment at H-elongata_contig137592:1138..1323- (Himanthalia elongata Himel1 dioecious)back to top |