mRNA_H-elongata_contig137426.2636.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A6H5L5K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K5_9PHAE) HSP 1 Score: 167 bits (422), Expect = 6.680e-51 Identity = 82/108 (75.93%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 1 KVKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQVS 324
+VKLAGTAGVRVEELTP RSVV+VAN+R+VQNHIG VHACGMALAAESATGI++GM+VPDS +PLCKSMAIDFTR+++G VTAVA L+ EQL ++ Q KGEA+VQV+
Sbjct: 34 QVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTAVAELSEEQLASLRDQEKGEANVQVT 141
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: D7FSZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSZ6_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.030e-50 Identity = 82/108 (75.93%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 1 KVKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQVS 324
+VKLAGTAGVRVEELTP RSVV+VAN+R+VQNHIG VHACGMALAAESATGI++GM+VPDS +PLCKSMAIDFTR+++G VTAVA L+ EQL ++ Q KGEA+VQV+
Sbjct: 47 QVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTAVAELSEEQLTAVRDQEKGEANVQVT 154
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: W7T2Q8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Q8_9STRA) HSP 1 Score: 134 bits (336), Expect = 9.010e-38 Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 4 VKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQV 321
VKLAGTA + VEE++ +R+VV + N R+VQNHIGG+HACGMALAAESATGIV+GMNVPDS +PLCKSM ++F R +G + AVA LT EQL I + KG+ V V
Sbjct: 37 VKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAV 142
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A836CKL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL5_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.280e-37 Identity = 61/107 (57.01%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 4 VKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQVS 324
VK AGTAG+ ++E+ P+R+VV + N R+VQNHIGGVHACGMAL +E+ATG+++ +NVPD+H+PLCKS +DF RIAKG + AVATLT + L + KG+ +V V+
Sbjct: 36 VKFAGTAGISIDEIGPQRAVVTLKNRRRVQNHIGGVHACGMALLSETATGVLLAINVPDTHLPLCKSFKLDFKRIAKGDLKAVATLTDDMLLQMTTTDKGDVTVPVT 142
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: K0SX00_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SX00_THAOC) HSP 1 Score: 130 bits (328), Expect = 1.430e-36 Identity = 62/104 (59.62%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 4 VKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASV 315
VKLAGTAG+R++EL+ +++ + +AN R+VQNHIGG+HAC MALAAESATGI+IGMNVPD+H+PL K+M +DF R KG + A ATL+ E I ++ KGE V
Sbjct: 36 VKLAGTAGIRIDELSHKKATISLANARRVQNHIGGLHACSMALAAESATGILIGMNVPDTHLPLIKTMKVDFVRRCKGDIRAEATLSDEDYRRIHEEDKGEVWV 139
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A349LV99_9GAMM (DUF4442 domain-containing protein n=1 Tax=Rheinheimera sp. TaxID=1869214 RepID=A0A349LV99_9GAMM) HSP 1 Score: 129 bits (324), Expect = 4.860e-36 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 4 VKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQV 321
+K AGTAGVRVE+L PE+SV+ + N R+VQNHIGGVHA MAL ESATG ++G++VPD IPL KSM ID+T+ A G + AVA+LTTEQ+ I +Q KGE V V
Sbjct: 34 IKFAGTAGVRVEQLDPEQSVLTLKNRRRVQNHIGGVHAAAMALLGESATGFLVGIHVPDDRIPLLKSMHIDYTKRATGDLKAVASLTTEQIQFITQQEKGEVQVSV 139
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A067BQP0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BQP0_SAPPC) HSP 1 Score: 127 bits (320), Expect = 2.140e-35 Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 KVKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQV 321
+VK+AG AG+ VE LT ++SVV + N +VQNHIGGVHACGMAL AESA+G+V GMNV DSH+PL KSM++ + + AKG + A+ATLT Q ++I K KGE V V
Sbjct: 36 QVKMAGVAGIHVETLTEQKSVVSLKNTFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMSYVKRAKGDLKAIATLTDAQREEIAKSDKGEVLVNV 142
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A485K5W2_9STRA (Aste57867_100 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5W2_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.840e-34 Identity = 61/107 (57.01%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 KVKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQV 321
+VK+AG AG+ +E L+ +SV+ + N +VQNHIGGVHACGMAL AESATG+V GMNV DSH+PL KSM++++ + A G + AVATLT+EQ D I++ KG V V
Sbjct: 36 QVKMAGVAGIHIESLSDSQSVLHLKNRFRVQNHIGGVHACGMALLAESATGVVFGMNVRDSHLPLLKSMSVNYVKRASGDLKAVATLTSEQRDAIQRDDKGNFVVDV 142
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A2D4C6H2_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6H2_PYTIN) HSP 1 Score: 127 bits (320), Expect = 4.600e-34 Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 KVKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQV 321
+VK+A T G+ + +L+ +R+ V + N +VQNHIGGVHACGMAL AESATG+V GMNVPDSHIPL KSM + + R+AKG + AVA+LT EQ+ DI +GE V V
Sbjct: 35 QVKMAATCGIHIHDLSGDRAHVSLKNSWRVQNHIGGVHACGMALLAESATGMVFGMNVPDSHIPLIKSMTVRYKRVAKGELQAVASLTPEQIKDITSSDRGEVLVDV 141
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Match: A0A1E7FFK6_9STRA (Thioesterase/thiol ester dehydrase-isomerase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFK6_9STRA) HSP 1 Score: 122 bits (307), Expect = 9.710e-34 Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 4 VKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATGIVIGMNVPDSHIPLCKSMAIDFTRIAKGGVTAVATLTTEQLDDIKKQGKGEASVQV 321
VKLAGTAG+RVE+L V + N RKVQNHIGG+HAC MALAAESATG+++GMNVPD+HIPL KSM I+F R +G + A A+L + I + KGE V V
Sbjct: 2 VKLAGTAGLRVEKLNKREVEVTLRNKRKVQNHIGGLHACSMALAAESATGMIVGMNVPDTHIPLIKSMNINFVRRCQGDIRATASLGEDDYKRINEDDKGEVKVDV 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137426.2636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137426.2636.1 >prot_H-elongata_contig137426.2636.1 ID=prot_H-elongata_contig137426.2636.1|Name=mRNA_H-elongata_contig137426.2636.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp KVKLAGTAGVRVEELTPERSVVRVANIRKVQNHIGGVHACGMALAAESATback to top mRNA from alignment at H-elongata_contig137426:139..1456- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137426.2636.1 ID=mRNA_H-elongata_contig137426.2636.1|Name=mRNA_H-elongata_contig137426.2636.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1318bp|location=Sequence derived from alignment at H-elongata_contig137426:139..1456- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137426:139..1456- >mRNA_H-elongata_contig137426.2636.1 ID=mRNA_H-elongata_contig137426.2636.1|Name=mRNA_H-elongata_contig137426.2636.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at H-elongata_contig137426:139..1456- (Himanthalia elongata Himel1 dioecious)back to top |