mRNA_H-elongata_contig137372.2632.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig137372.2632.1
Unique NamemRNA_H-elongata_contig137372.2632.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: A0A2R4QQ88_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ88_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 8.060e-196
Identity = 292/303 (96.37%), Postives = 299/303 (98.68%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FVLLTTLIFPLCLLASWTF KGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFML+GVVYIYL VGST+YEALSV+KFS YNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFPEASIY+TPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGT+IGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FVLLTTLIFPLCLLASWTFNKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLVGVVYIYLSVGSTSYEALSVIKFSSYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASIYFTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: A0A0U1WNP0_SARFS (NADH-ubiquinone oxidoreductase chain 4 n=23 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNP0_SARFS)

HSP 1 Score: 536 bits (1381), Expect = 1.600e-188
Identity = 278/303 (91.75%), Postives = 294/303 (97.03%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            F+LLTTLIFPLCLLASWTFEKG+LK YLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTL GSLFMLIGVVYIYL VGST+YE LS+ KFS YNQ+WLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFP+A +Y+TPF+FSLSVLG+VYTSLTAIRQTDLKRLIAYTSVAHMNLVM+GLF+GT+IG+EAAILQSLSHGFVSSALFLIIGVLYDRWHTRGV YYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FLLLTTLIFPLCLLASWTFEKGNLKIYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLFGSLFMLIGVVYIYLSVGSTSYEILSITKFSNYNQRWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPQACLYFTPFVFSLSVLGIVYTSLTAIRQTDLKRLIAYTSVAHMNLVMVGLFSGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVNYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: E6ZET0_ECTSI (NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Ectocarpales TaxID=2877 RepID=E6ZET0_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 2.270e-188
Identity = 277/303 (91.42%), Postives = 295/303 (97.36%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FV+LTTLIFPLCLLASW+F+KGD+KTYLISFLSMELVLLLVFT+LDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTL GSLFMLIGV+YIYL  GSTNYE+L+ V FS Y+QKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFPEAS+Y+TPF+FSLS+LGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGT+IG+EAAILQSLSHGFVSSALFLIIGVLYDRWH+R VKYYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FVILTTLIFPLCLLASWSFDKGDIKTYLISFLSMELVLLLVFTNLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLFGSLFMLIGVIYIYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: D0IPZ5_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=74 Tax=Phaeophyceae TaxID=2870 RepID=D0IPZ5_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 1.070e-186
Identity = 276/303 (91.09%), Postives = 294/303 (97.03%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FV+LTTLIFPLCLLASW+F+KG++KTYLISFL MELVLLLVFT+LDLLFFYIFFEAVLIPMFLVIGIYGSR+RKIRAAYMFFLYTLLGSLFMLIG+VYIYL  GSTNYE LSV+ FS Y+QKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFP AS+Y+TPFIFSLS+LGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGT+IG+EAAILQSLSHGFVSSALFLIIGVLYDRWH+R VKYYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FVILTTLIFPLCLLASWSFDKGEVKTYLISFLGMELVLLLVFTNLDLLFFYIFFEAVLIPMFLVIGIYGSRERKIRAAYMFFLYTLLGSLFMLIGIVYIYLFAGSTNYEILSVINFSPYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPLASVYFTPFIFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: A0A1I9LW78_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW78_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 7.110e-185
Identity = 271/303 (89.44%), Postives = 294/303 (97.03%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FV+LTTLIFP+CL+ASW+F+KGD+KTYLISFLSMELVLLLVFT+LDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTL GSLFMLIGV+YIYL  GSTNYE L+ + FS Y+QKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFPEAS+Y+TPF+FSLS+LG+VYTSLTAIRQTDLKRLIAYTSVAHMNLV+IGLFTGT+IGIEAAILQSLSHGFVSSALFLIIGVLYDR+H+R +KYYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FVILTTLIFPICLIASWSFDKGDVKTYLISFLSMELVLLLVFTNLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLFGSLFMLIGVIYIYLFSGSTNYETLATISFSSYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGIVYTSLTAIRQTDLKRLIAYTSVAHMNLVIIGLFTGTVIGIEAAILQSLSHGFVSSALFLIIGVLYDRFHSRVIKYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: Q8LWY6_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Laminariales TaxID=2886 RepID=Q8LWY6_9PHAE)

HSP 1 Score: 520 bits (1339), Expect = 4.010e-182
Identity = 270/304 (88.82%), Postives = 290/304 (95.39%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAG-SVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            F++LTTLIFPLCLLASW+F KG++K YLISFL MELVLLLVFT+LDLLFFYIFFEAVLIPMFLVIGIYGSR+RKIRAAYMFFLYTLLGSLFMLIG++YIYL  GSTNYEALSV+ FS Y+QKWLW AFFASFAAKVPMLPVHIWLPEAHVEAPTAG  +ILAGILLKLGSYGFLRFSL LFP AS+Y+TPFIFSLS+LGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGT+IG+EAAILQ LSHGFVSSALFLIIGVLYDRWH+R VKYYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FIILTTLIFPLCLLASWSFNKGEVKPYLISFLGMELVLLLVFTNLDLLFFYIFFEAVLIPMFLVIGIYGSRERKIRAAYMFFLYTLLGSLFMLIGIIYIYLFAGSTNYEALSVINFSSYDQKWLWFAFFASFAAKVPMLPVHIWLPEAHVEAPTAGFKIILAGILLKLGSYGFLRFSLGLFPLASVYFTPFIFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQRLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 387          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: A0A8F0K293_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K293_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 1.530e-174
Identity = 262/303 (86.47%), Postives = 284/303 (93.73%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FVLLT+LIFPLCLLASW+F K +L+ YLISFL MELVLLLVFT +DLLFFYIFFEAVLIPMFLVIGIYGSR+RKIRAAYM F+YTLLGSLFMLIGV+YIYL  GST++E L+++ FS Y Q+WLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFP ASIY+TP +FSLSV GVVYTSLTAIRQTDLKRLIAYTSVAHMNLV+IGLFTGT+IGIEAAI+QSLSHGFVSSALFL IGVLYDRWH+R V YYGGLTHTMP+FII+FLFFTMANLGLPGTS
Sbjct:   84 FVLLTSLIFPLCLLASWSFAKDNLRVYLISFLIMELVLLLVFTCVDLLFFYIFFEAVLIPMFLVIGIYGSRERKIRAAYMLFIYTLLGSLFMLIGVLYIYLFAGSTHFEVLNMIGFSPYTQRWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPLASIYFTPLVFSLSVFGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVVIGLFTGTVIGIEAAIVQSLSHGFVSSALFLSIGVLYDRWHSRVVTYYGGLTHTMPIFIIIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: A0A4Y5T8F5_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8F5_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 5.890e-171
Identity = 253/303 (83.50%), Postives = 282/303 (93.07%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FV+LTTLIFPLC+LASW+   G +K +L+SFL +EL+L+LVFTSLDL+FFYIFFE VLIPMFL+IGI+GSRQRK+RAAY+FFLYTLLGSL ML+ VVYIY   G+T+YEAL  +KFS Y+Q+WLWLAFFASFAAKVPMLP HIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFPEASIY+TPFIF LS+LGVVYTSLTAIRQTDLKRLIAYTSVAHMNLV+IGLFTGT+IG+EAA+LQSLSHGFVSSALFLIIGVLYDRWH+R +KYYGGL HTMPLFI +FLFFTMANLGLPGTS
Sbjct:   84 FVILTTLIFPLCILASWSSITGGVKPFLVSFLVLELILILVFTSLDLIFFYIFFETVLIPMFLIIGIWGSRQRKVRAAYLFFLYTLLGSLLMLVAVVYIYHYAGTTSYEALLGIKFSEYDQRWLWLAFFASFAAKVPMLPFHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASIYFTPFIFCLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVVIGLFTGTVIGVEAALLQSLSHGFVSSALFLIIGVLYDRWHSRVIKYYGGLVHTMPLFISIFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: Q2TUA4_DICDH (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA4_DICDH)

HSP 1 Score: 477 bits (1228), Expect = 2.620e-165
Identity = 246/303 (81.19%), Postives = 278/303 (91.75%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            FV+LTTLIFPLC+L+SW      +K++LISF+ ME VL+LVFTSLDL+ FYIFFE VLIPMFLVIG++GSRQRK+RAAY+FFLYTL GSL MLI V+YIY   G++NYE LS ++FS Y+Q+WLWLAFFASFAAKVPMLP HIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFS  LFPEAS+Y+TPFIFSLS+LGVVYTSLTAIRQTDLKRL+AYTSVAHMNLV+IGLFTG+I+G+EAA+LQSLSHGFVSSALFLIIGVLYDRWH+R VKYY GL H+MP+FIIVFLFFTMANLGLPGTS
Sbjct:   84 FVILTTLIFPLCILSSWFSINVGVKSFLISFMLMEFVLILVFTSLDLVLFYIFFETVLIPMFLVIGVWGSRQRKVRAAYLFFLYTLFGSLLMLIAVIYIYHFSGTSNYEILSTIEFSEYSQRWLWLAFFASFAAKVPMLPFHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSWGLFPEASVYFTPFIFSLSLLGVVYTSLTAIRQTDLKRLVAYTSVAHMNLVVIGLFTGSILGVEAALLQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLPGTS 386          
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Match: A0A8F0K094_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K094_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 1.460e-164
Identity = 246/303 (81.19%), Postives = 273/303 (90.10%), Query Frame = 1
Query:    1 FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFFYIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIYLLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLPGTS 909
            F+LLTTLIFP+C+LASW   + D+K YLI FL MELVL+LVFT LD+ FFYIFFE VLIPMFLVIG++GSRQRKIRAAY+FFLYTLLGSLFMLIGVVYIY LVGSTNY  LS + FS Y+QKWLWL FFASFA KVPMLP H+WLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSL LFP AS+YY P ++SLS++GVVYTSLTAIRQTD KRLIAYTSVAHMNLV+IGLFTGT IG+EAA+ QSLSHGFVSSALFLIIG+LYDRWH+R + YYGGL +TMPLFII+FLFFT+ANLGLP TS
Sbjct:   84 FILLTTLIFPICILASWFSVRTDVKFYLICFLIMELVLILVFTCLDIFFFYIFFEIVLIPMFLVIGLWGSRQRKIRAAYLFFLYTLLGSLFMLIGVVYIYRLVGSTNYIVLSFIDFSFYDQKWLWLLFFASFAVKVPMLPFHLWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPLASVYYAPIVYSLSLIGVVYTSLTAIRQTDFKRLIAYTSVAHMNLVIIGLFTGTAIGVEAALFQSLSHGFVSSALFLIIGILYDRWHSRIISYYGGLVYTMPLFIILFLFFTLANLGLPCTS 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137372.2632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ88_9PHAE8.060e-19696.37NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Fuc... [more]
A0A0U1WNP0_SARFS1.600e-18891.75NADH-ubiquinone oxidoreductase chain 4 n=23 Tax=Sa... [more]
E6ZET0_ECTSI2.270e-18891.42NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Ec... [more]
D0IPZ5_9PHAE1.070e-18691.09NADH-ubiquinone oxidoreductase chain 4 n=74 Tax=Ph... [more]
A0A1I9LW78_9PHAE7.110e-18589.44NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ple... [more]
Q8LWY6_9PHAE4.010e-18288.82NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Lam... [more]
A0A8F0K293_9PHAE1.530e-17486.47NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ana... [more]
A0A4Y5T8F5_9PHAE5.890e-17183.50NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dic... [more]
Q2TUA4_DICDH2.620e-16581.19NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dic... [more]
A0A8F0K094_9PHAE1.460e-16481.19NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137372contigH-elongata_contig137372:813..1748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score354.4
Seed ortholog evalue5.5e-95
Seed eggNOG ortholog1280944.HY17_17470
Preferred namenuoM
KEGG rclassRC00061
KEGG koko:K00342
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
EggNOG free text desc.NADH ubiquinone oxidoreductase subunit
EggNOG OGs1MV7V@1224,2TSNK@28211,43WV9@69657,COG1008@1,COG1008@2
EC1.6.5.3
COG Functional cat.C
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Exons1
Model size936
Cds size936
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929816.2422254-CDS-H-elongata_contig137372:812..17481622929816.2422254-CDS-H-elongata_contig137372:812..1748Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig137372 813..1748 -
1691679168.5315752-CDS-H-elongata_contig137372:812..17481691679168.5315752-CDS-H-elongata_contig137372:812..1748Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig137372 813..1748 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137372.2632.1prot_H-elongata_contig137372.2632.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig137372 813..1748 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig137372.2632.1

>prot_H-elongata_contig137372.2632.1 ID=prot_H-elongata_contig137372.2632.1|Name=mRNA_H-elongata_contig137372.2632.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=312bp
FVLLTTLIFPLCLLASWTFEKGDLKTYLISFLSMELVLLLVFTSLDLLFF
YIFFEAVLIPMFLVIGIYGSRQRKIRAAYMFFLYTLLGSLFMLIGVVYIY
LLVGSTNYEALSVVKFSLYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHV
EAPTAGSVILAGILLKLGSYGFLRFSLNLFPEASIYYTPFIFSLSVLGVV
YTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTIIGIEAAILQSLSHG
FVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPLFIIVFLFFTMANLGLP
GTSXXXXIYVFF
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mRNA from alignment at H-elongata_contig137372:813..1748-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig137372.2632.1 ID=mRNA_H-elongata_contig137372.2632.1|Name=mRNA_H-elongata_contig137372.2632.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=936bp|location=Sequence derived from alignment at H-elongata_contig137372:813..1748- (Himanthalia elongata Himel1 dioecious)
TTTGTTCTTTTAACTACATTAATTTTTCCTTTATGCTTATTAGCTTCTTG GACATTTGAAAAAGGGGATTTAAAAACATATTTAATTAGTTTTTTAAGCA TGGAATTAGTTTTACTTTTAGTATTTACTAGTTTGGATCTATTGTTTTTT TATATATTTTTTGAGGCGGTTTTGATACCTATGTTTTTAGTTATAGGTAT ATATGGATCACGACAAAGAAAAATACGGGCTGCTTATATGTTTTTTTTAT ACACCCTCTTAGGTTCTTTATTTATGCTGATAGGGGTTGTTTATATTTAC TTATTGGTCGGTAGTACAAACTATGAAGCTTTATCTGTGGTAAAATTTTC TTTGTACAATCAAAAATGGTTGTGGCTAGCTTTTTTTGCTTCCTTTGCTG CTAAAGTGCCTATGTTACCCGTTCATATATGGTTACCTGAAGCACATGTA GAAGCTCCTACTGCAGGTTCAGTTATTTTAGCAGGGATCCTTTTAAAACT AGGATCTTATGGATTTTTACGATTTTCTCTTAATCTCTTTCCTGAAGCTT CAATTTATTACACACCATTTATTTTTAGCTTAAGTGTTCTTGGGGTAGTC TATACTTCTTTAACAGCAATAAGACAAACCGATCTAAAACGCTTAATTGC CTACACTTCAGTAGCTCATATGAATCTTGTTATGATTGGATTATTTACAG GTACCATTATAGGTATAGAGGCTGCGATATTGCAAAGTTTAAGTCACGGT TTTGTTTCTTCGGCTTTATTTCTTATTATAGGAGTATTGTACGATAGATG GCATACTCGAGGTGTTAAATATTATGGTGGATTAACTCATACTATGCCGT TATTTATAATTGTTTTTCTTTTCTTTACTATGGCTAATTTAGGTTTACCC GGTACCTCAAGNNNNNNNNNNATCTATGTCTTTTTT
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Coding sequence (CDS) from alignment at H-elongata_contig137372:813..1748-

>mRNA_H-elongata_contig137372.2632.1 ID=mRNA_H-elongata_contig137372.2632.1|Name=mRNA_H-elongata_contig137372.2632.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1872bp|location=Sequence derived from alignment at H-elongata_contig137372:813..1748- (Himanthalia elongata Himel1 dioecious)
TTTGTTCTTTTAACTACATTAATTTTTCCTTTATGCTTATTAGCTTCTTG
GACATTTGAAAAAGGGGATTTAAAAACATATTTAATTAGTTTTTTAAGCA
TGGAATTAGTTTTACTTTTAGTATTTACTAGTTTGGATCTATTGTTTTTT
TATATATTTTTTGAGGCGGTTTTGATACCTATGTTTTTAGTTATAGGTAT
ATATGGATCACGACAAAGAAAAATACGGGCTGCTTATATGTTTTTTTTAT
ACACCCTCTTAGGTTCTTTATTTATGCTGATAGGGGTTGTTTATATTTAC
TTATTGGTCGGTAGTACAAACTATGAAGCTTTATCTGTGGTAAAATTTTC
TTTGTACAATCAAAAATGGTTGTGGCTAGCTTTTTTTGCTTCCTTTGCTG
CTAAAGTGCCTATGTTACCCGTTCATATATGGTTACCTGAAGCACATGTA
GAAGCTCCTACTGCAGGTTCAGTTATTTTAGCAGGGATCCTTTTAAAACT
AGGATCTTATGGATTTTTACGATTTTCTCTTAATCTCTTTCCTGAAGCTT
CAATTTATTACACACCATTTATTTTTAGCTTAAGTGTTCTTGGGGTAGTC
TATACTTCTTTAACAGCAATAAGACAAACCGATCTAAAACGCTTAATTGC
CTACACTTCAGTAGCTCATATGAATCTTGTTATGATTGGATTATTTACAG
GTACCATTATAGGTATAGAGGCTGCGATATTGCAAAGTTTAAGTCACGGT
TTTGTTTCTTCGGCTTTATTTCTTATTATAGGAGTATTGTACGATAGATG
GCATACTCGAGGTGTTAAATATTATGGTGGATTAACTCATACTATGCCGT
TATTTATAATTGTTTTTCTTTTCTTTACTATGGCTAATTTAGGTTTACCC
GGTACCTCAAGNNNNNNNNNNATCTATGTCTTTTTTTTTGTTCTTTTAAC
TACATTAATTTTTCCTTTATGCTTATTAGCTTCTTGGACATTTGAAAAAG
GGGATTTAAAAACATATTTAATTAGTTTTTTAAGCATGGAATTAGTTTTA
CTTTTAGTATTTACTAGTTTGGATCTATTGTTTTTTTATATATTTTTTGA
GGCGGTTTTGATACCTATGTTTTTAGTTATAGGTATATATGGATCACGAC
AAAGAAAAATACGGGCTGCTTATATGTTTTTTTTATACACCCTCTTAGGT
TCTTTATTTATGCTGATAGGGGTTGTTTATATTTACTTATTGGTCGGTAG
TACAAACTATGAAGCTTTATCTGTGGTAAAATTTTCTTTGTACAATCAAA
AATGGTTGTGGCTAGCTTTTTTTGCTTCCTTTGCTGCTAAAGTGCCTATG
TTACCCGTTCATATATGGTTACCTGAAGCACATGTAGAAGCTCCTACTGC
AGGTTCAGTTATTTTAGCAGGGATCCTTTTAAAACTAGGATCTTATGGAT
TTTTACGATTTTCTCTTAATCTCTTTCCTGAAGCTTCAATTTATTACACA
CCATTTATTTTTAGCTTAAGTGTTCTTGGGGTAGTCTATACTTCTTTAAC
AGCAATAAGACAAACCGATCTAAAACGCTTAATTGCCTACACTTCAGTAG
CTCATATGAATCTTGTTATGATTGGATTATTTACAGGTACCATTATAGGT
ATAGAGGCTGCGATATTGCAAAGTTTAAGTCACGGTTTTGTTTCTTCGGC
TTTATTTCTTATTATAGGAGTATTGTACGATAGATGGCATACTCGAGGTG
TTAAATATTATGGTGGATTAACTCATACTATGCCGTTATTTATAATTGTT
TTTCTTTTCTTTACTATGGCTAATTTAGGTTTACCCGGTACCTCAAGNNN
NNNNNNNATCTATGTCTTTTTT
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