mRNA_H-elongata_contig13729.2624.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: D8LU51_ECTSI (PEROXIDASE_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU51_ECTSI) HSP 1 Score: 130 bits (327), Expect = 6.610e-35 Identity = 62/74 (83.78%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIEG 225
I +DL MMEAED+ REDG+SIAGTLVRLAWHASGTYSK D TGGSNGACMRMSPEKDWGANAGL VARDF+ G
Sbjct: 83 IKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVG 156
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A7S1XUV8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUV8_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.970e-25 Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
+ D+ ++EA+++KR DG+S+AGT VRLAWHASGTYS D TGGSNGA MR PE WGANAGLGVARD +E
Sbjct: 39 VKDDIKAIIEADEAKRGDGTSLAGTFVRLAWHASGTYSVKDKTGGSNGATMRFEPESAWGANAGLGVARDALE 111
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A482SDA4_9ARCH (PEROXIDASE_4 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDA4_9ARCH) HSP 1 Score: 102 bits (253), Expect = 5.440e-25 Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
+ D++ +EAEDS+R DG+SI TLVRLAWHA+GTYS D TGGSNGA MR SPE DWGAN GL ARD +E
Sbjct: 68 VKADIIAAIEAEDSRRSDGTSIGPTLVRLAWHAAGTYSIHDKTGGSNGASMRYSPESDWGANKGLKGARDLLE 140
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A7S0SWF4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWF4_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.000e-24 Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFI 219
+ QD++ ++E ++ REDG+SIAGTLVRLAWHASGTYS D+TGGSNG+ MR PE WGANAGL +AR+F+
Sbjct: 64 VKQDIIKLIEFDNDFREDGTSIAGTLVRLAWHASGTYSNVDHTGGSNGSTMRYPPESQWGANAGLAIAREFL 135
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A7S2HS73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HS73_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.200e-24 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
+ + +V ++E + KR DG+S+ GT VRLAWH +GTYSK D +GGSNGA MR +PE WGANAGLGVARD +E
Sbjct: 47 VRKSIVDVIETDAEKRGDGTSLTGTFVRLAWHCAGTYSKEDGSGGSNGARMRFTPESSWGANAGLGVARDALE 119
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A7S1YJW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YJW7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.630e-23 Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
+ +V +ME + KR DG+S+AGT +RLAWH SGTYSK D TGGSNGA MR PE WGANAGLGVAR +E
Sbjct: 83 VRDTIVSVMEEDAEKRGDGTSLAGTFIRLAWHCSGTYSKADGTGGSNGARMRFDPEAKWGANAGLGVARSALE 155
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A7S2LA67_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA67_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.420e-22 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
+ Q +V ++++ KREDG+S+ GT VRLAWHASGTY+K DN+GGSNG MR PE +GANAGLGVAR +E
Sbjct: 42 VKQSIVDVIDSNAEKREDGTSLTGTFVRLAWHASGTYAKADNSGGSNGGRMRFDPEASFGANAGLGVARAALE 114
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A836CN41_9STRA (Heme peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN41_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.020e-21 Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
+ +D+ ++EA+ +KR DG+S+AGTLVRLAWHASGTY K GGS GA MR PEK WGANAGLG AR +E
Sbjct: 70 VKKDIAQVIEADAAKRGDGTSLAGTLVRLAWHASGTYCKSAGNGGSAGATMRFEPEKSWGANAGLGPARAALE 142
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A6S8QI18_9STRA (Hypothetical protein n=9 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8QI18_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.710e-21 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
I + + ++E + KR DG+S+ GT VRLAWH SG+YSK D +GGS+GA MR +PE WG NAGLG+ARD +E
Sbjct: 44 IRESIATLIETDSEKRGDGTSLTGTFVRLAWHCSGSYSKEDGSGGSDGARMRFNPEASWGGNAGLGIARDALE 116
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Match: A0A7S2AZ52_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZ52_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.040e-21 Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 4 INQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGACMRMSPEKDWGANAGLGVARDFIE 222
I +D+ M++A+ KR+DG+S+A TLVRLAWH SGTYS D TGGSNG MR +PE WGANAGL AR F+E
Sbjct: 76 IREDIENMVDADFEKRDDGTSMAPTLVRLAWHCSGTYSCADKTGGSNGCQMRFNPEAGWGANAGLSTARLFLE 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13729.2624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13729.2624.1 >prot_H-elongata_contig13729.2624.1 ID=prot_H-elongata_contig13729.2624.1|Name=mRNA_H-elongata_contig13729.2624.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp MINQDLVIMMEAEDSKREDGSSIAGTLVRLAWHASGTYSKGDNTGGSNGAback to top mRNA from alignment at H-elongata_contig13729:313..1237- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13729.2624.1 ID=mRNA_H-elongata_contig13729.2624.1|Name=mRNA_H-elongata_contig13729.2624.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=925bp|location=Sequence derived from alignment at H-elongata_contig13729:313..1237- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13729:313..1237- >mRNA_H-elongata_contig13729.2624.1 ID=mRNA_H-elongata_contig13729.2624.1|Name=mRNA_H-elongata_contig13729.2624.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig13729:313..1237- (Himanthalia elongata Himel1 dioecious)back to top |