mRNA_H-elongata_contig137078.2611.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: D8LKP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKP3_ECTSI) HSP 1 Score: 133 bits (335), Expect = 9.710e-35 Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRFHQ 209
AYTSDDS++F VDCVLQGDLL+RCRH+SP GRRVSMFRAAFHTGYVP GVLRLTKQQLDGACAD RFHQ
Sbjct: 375 AYTSDDSISFPVDCVLQGDLLVRCRHVSPTGRRVSMFRAAFHTGYVPCGVLRLTKQQLDGACADDRFHQ 443
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A1V9Y3Y7_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y3Y7_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.840e-28 Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRF 203
A TSD SV+F VDC+LQGD+LIRCRHL+ G+R+SMFRAAFHTGY+P G+LRLTK QLDGAC D RF
Sbjct: 107 ASTSDGSVSFNVDCMLQGDVLIRCRHLTDSGQRISMFRAAFHTGYIPMGILRLTKAQLDGACQDPRF 173
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A7S2BHX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX5_9STRA) HSP 1 Score: 108 bits (271), Expect = 9.760e-27 Identity = 52/67 (77.61%), Postives = 54/67 (80.60%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRF 203
AY SD SVAF VD VLQGDLL+RCRHL+ G RVSMFRA FHTGYVP GVLRL K QLDGAC D RF
Sbjct: 159 AYPSDQSVAFSVDAVLQGDLLLRCRHLTAKGTRVSMFRAGFHTGYVPCGVLRLNKAQLDGACTDPRF 225
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A1V9Y613_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y613_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.170e-26 Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRF 203
A TSD SV+F VDC+LQGD+L+RCRHL+ G+R+SMFRAAFHTGY+P G+LRLTK QLDGAC D RF
Sbjct: 353 ASTSDGSVSFNVDCMLQGDVLVRCRHLTDSGQRISMFRAAFHTGYIPMGILRLTKAQLDGACQDPRF 419
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A3F2RZ89_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZ89_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.250e-26 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRFHQ 209
A TSD SV+F V+C+LQGD+LIRCRHL+ G RVSMFR AFHTGY+P G+LRLTK QLDGAC D RF Q
Sbjct: 424 ASTSDGSVSFNVNCMLQGDVLIRCRHLTDTGERVSMFRGAFHTGYIPHGILRLTKAQLDGACGDSRFDQ 492
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A484ECN3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECN3_BRELC) HSP 1 Score: 109 bits (272), Expect = 3.140e-26 Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRFHQ 209
A T D S++F V+C+LQGD+LIRCRHL+ G+RVSMFR AFHTGY+P G+LRLTK QLDGAC+D RF Q
Sbjct: 424 ANTGDGSISFNVNCMLQGDILIRCRHLTNSGQRVSMFRGAFHTGYIPQGILRLTKAQLDGACSDSRFDQ 492
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A6A4G6V6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G6V6_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.140e-26 Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRFHQ 209
A T D SV+F VDC+LQGD+L+RCRHL+ G RVSMFR AFHTGY+P G+LRLTK QLDGAC D RF Q
Sbjct: 419 ASTGDGSVSFNVDCMLQGDILVRCRHLTAAGERVSMFRGAFHTGYIPQGILRLTKAQLDGACGDPRFDQ 487
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A6G0WDR9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDR9_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.140e-26 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 3
Query: 9 TSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRF 203
TSD S++F VDC+LQGD+LIRCRHL+ G R+SMFRAAFHTGY+P G+LRLTK QLDGAC D RF
Sbjct: 349 TSDGSLSFHVDCMLQGDILIRCRHLTDSGARISMFRAAFHTGYIPLGILRLTKGQLDGACQDNRF 413
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: A0A7S2S2N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2N4_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.840e-26 Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRF 203
AY SD S++F+VD VLQGD+L+RCRH++ G RVSMFRAAFHTGYVP GVLRL K QLDGAC D RF
Sbjct: 377 AYPSDQSISFVVDAVLQGDVLLRCRHITAKGARVSMFRAAFHTGYVPRGVLRLNKAQLDGACLDSRF 443
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Match: M4BD47_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BD47_HYAAE) HSP 1 Score: 108 bits (270), Expect = 5.850e-26 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 3
Query: 3 AYTSDDSVAFLVDCVLQGDLLIRCRHLSPDGRRVSMFRAAFHTGYVPSGVLRLTKQQLDGACADGRFHQ 209
A T+D SV+F V+C+LQGD+LIRCRHL+ G RVSMFR AFHTGY+P GVLRLTK QLDGAC D RF Q
Sbjct: 420 ASTADGSVSFNVNCMLQGDILIRCRHLTDAGERVSMFRGAFHTGYIPQGVLRLTKAQLDGACTDTRFDQ 488 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137078.2611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137078.2611.1 >prot_H-elongata_contig137078.2611.1 ID=prot_H-elongata_contig137078.2611.1|Name=mRNA_H-elongata_contig137078.2611.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp GPTRATTAWHFWWTASCKATCSSVVATSVRTGEGFPCSVRRFIPGTCLVAback to top mRNA from alignment at H-elongata_contig137078:775..1465- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137078.2611.1 ID=mRNA_H-elongata_contig137078.2611.1|Name=mRNA_H-elongata_contig137078.2611.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=691bp|location=Sequence derived from alignment at H-elongata_contig137078:775..1465- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137078:775..1465- >mRNA_H-elongata_contig137078.2611.1 ID=mRNA_H-elongata_contig137078.2611.1|Name=mRNA_H-elongata_contig137078.2611.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=312bp|location=Sequence derived from alignment at H-elongata_contig137078:775..1465- (Himanthalia elongata Himel1 dioecious)back to top |