mRNA_H-elongata_contig13670.2589.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: D7FPG4_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG4_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.730e-66 Identity = 111/174 (63.79%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVL----------GLTISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHG---------EDEWERQCELAMRTNSGLNVTDFARIVVARALYLL 465
S+SWSFNVCGSK WTLF EATP LYDR+GR LA DV D + FP+L+ APRLEV Q PGEAIFVPSGWHHQV+ GLT+SVNTNWFNGF+LD V +FL SEL+AVR ALDHLR+ M G EWE QCEL MR NS NVTDFAR+V ARA +LL
Sbjct: 176 SFSWSFNVCGSKHWTLFPTEATPDLYDRYGRDLAKDVRSGRADPDKFPRLDAAPRLEVYQGPGEAIFVPSGWHHQVVNTGDGREGGGGLTVSVNTNWFNGFNLDKVAAFLHSELSAVRAALDHLRETMSGGGGAGGTGGRREWENQCELVMRANSSFNVTDFARLVTARAQHLL 349
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: A0A024TFP1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFP1_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.620e-37 Identity = 71/153 (46.41%), Postives = 92/153 (60.13%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL---TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVAR 450
SYSWS N+CG K W LF T L+DR GR AT+ + D FP L A + VVQ GEA+FVPSGW+HQV L T+SVN NWFN +SL+ + +FL ELAAV + H R +DEW C++ +R N G++ D A ++ AR
Sbjct: 170 SYSWSINICGRKEWLLFPPTETWKLWDRSGRCTATNATE--FDATQFPHLATAHHVRVVQGVGEALFVPSGWYHQVQNLDRDTLSVNHNWFNAYSLEQMWAFLQHELAAVEREIGHCRDSFDSDDEWLDHCQVVLRANIGMSYVDVAALLRAR 320
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: W4GAV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAV2_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.250e-36 Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVL---GLTISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVAR 450
SYSWS N+CG K W +F T L DR GR A + +D FP + A ++VVQ GEA+FVPSGW+HQV G T+S+N NWFN +SL+ + +F+ +EL AV +DH R+ +D+W C++ +R N G++ +FA ++ AR
Sbjct: 171 SYSWSINICGKKEWLMFPPTETWKLRDRSGRYTAPSAN--TVDATAFPNVTSARYIKVVQEVGEALFVPSGWYHQVRNLEGTTLSINHNWFNAYSLERMWAFMQAELHAVEQEIDHCRETFDSDDDWHHHCQVLLRANIGMHFNEFAALLQAR 321
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: A0A8K1CS59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS59_PYTOL) HSP 1 Score: 137 bits (344), Expect = 3.940e-36 Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL--TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQ-DMHGEDEWERQCELAMRTNSGLNVTDFARIVVARAL 456
SYSWS NVCG K W F + L D+ GR + D+ D + +P+ A L VVQ GEAIFVPSGW+HQV + TIS+N NWFNGF++ + SF SE AAV T L+HL++ + G D + QC+L M+ N+G+N +F ++V A+ L
Sbjct: 167 SYSWSVNVCGQKEWIFFHPDEESKLKDKFGRTVLPDITSKDYDKDLYPRAHEATPLYVVQDSGEAIFVPSGWYHQVRNVRDTISINHNWFNGFNILEIWSFFKSEYAAVETELEHLKEIGLTGLD-FRDQCQLIMQANTGMNYVEFRQLVEAKVL 320
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: A0A485KUP5_9STRA (Aste57867_11851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUP5_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.910e-35 Identity = 67/155 (43.23%), Postives = 90/155 (58.06%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQV--LGLTISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVARALY 459
SYSWS N+ G K W L+ TP L DR GR A D + FP + A + +VQ G A+FVPSGW+HQV LG T+S+N NWFN ++L + +FL EL AV + H R +DEW C+L +R N G+N+ +F ++VAR Y
Sbjct: 172 SYSWSINIVGQKEWLLYPPSQTPKLLDRFGRTSARDA--TTANATQFPGVASARHVTIVQDVGTALFVPSGWYHQVRNLGETLSINHNWFNAYTLRRIWAFLQRELQAVEREIAHCRDGFDSDDEWTNHCQLLLRANIGMNMGEFRDLLVARLKY 324
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: D0MYT3_PHYIT (JmjC domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYT3_PHYIT) HSP 1 Score: 133 bits (334), Expect = 1.070e-34 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL--TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVARALYLL 465
SYSWS NVCG K+W + + P L DR GR + DV +D E +PQ A + VVQ G+AIFVPSGW+HQV L TIS+N NWFNG+++ + F E AAV L+ L++ E+ QC+L M N+G+N +F ++ A+A LL
Sbjct: 164 SYSWSVNVCGRKKWVFYHPDDEPKLKDRFGRFVVPDVTIGKIDTEQYPQFHEAKPIHVVQETGDAIFVPSGWYHQVENLEDTISINHNWFNGYNVREMWKFFKREYAAVERELEDLKEMGLVGREFGDQCQLVMLANTGINYVEFRELLYAKASQLL 320
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: G4YKL4_PHYSP (JmjC domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKL4_PHYSP) HSP 1 Score: 132 bits (333), Expect = 1.160e-34 Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL--TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVARALYLL 465
SYSWS NVCG K W + + P L DR GR + DV + +D E +P A + V+Q G+AIFVPSGW+HQV L TIS+N NWFNG+++ + F E AAV L+ L++ E+ QC+L M N+G+N +F ++ A+A YLL
Sbjct: 158 SYSWSVNVCGRKEWIFYHPDDEPKLKDRFGRFVLPDVTAEDVDREKYPHFHEAKPIYVIQETGDAIFVPSGWYHQVRNLEDTISINHNWFNGYNVRELWEFFKREYAAVEHELEDLKEMGLVGREFVDQCQLVMLANTGINYVEFRELLYAKASYLL 314
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: A0A329T2P2_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T2P2_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.790e-33 Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL--TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVARALYLL 465
SYSWS NVCG K+W + + L DR GR + +DV +D E +P A + V+Q G+AIFVPSGW+HQV L TIS+N NWFNG+++ + F E AAV L+ L++ E+ QC+L MR N+G+N +F ++ A+A LL
Sbjct: 158 SYSWSVNVCGRKKWVFYHPDDESKLKDRFGRLVVSDVTVGNIDKENYPHFHEAKPVYVIQETGDAIFVPSGWYHQVENLEDTISINHNWFNGYNVRELWDFFKKEYAAVERELEDLKEMGLVGREFVDQCQLVMRANTGINYLEFRELLYAKARELL 314
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: W2R2S1_PHYPN (JmjC domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R2S1_PHYPN) HSP 1 Score: 129 bits (324), Expect = 5.370e-33 Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL--TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVARA 453
SYSWS NVCG K+W + + P L DR GR + DV +D E +PQ A + +Q G+A+FVPSGW+HQV L TIS+N NWFNG+++ + FL E +AV L+ L++ E+ QC+L M N+G+N +F ++ A+A
Sbjct: 158 SYSWSVNVCGRKKWIFYHPDDEPKLKDRFGRFVVPDVTVANIDKEQYPQFHEAKPMYAIQETGDAVFVPSGWYHQVENLEDTISINHNWFNGYNVRELWGFLKREYSAVELELEDLKEMGLVGREFVEQCQLVMLANAGINYLEFRELLYAKA 310
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Match: A0A225X319_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X319_9STRA) HSP 1 Score: 128 bits (321), Expect = 7.100e-33 Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 1 SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLEGAPRLEVVQAPGEAIFVPSGWHHQVLGL--TISVNTNWFNGFSLDSVRSFLSSELAAVRTALDHLRQDMHGEDEWERQCELAMRTNSGLNVTDFARIVVARALYLL 465
SYSWS NVCG K W + + L DR GR + DV +D E +PQ A + V+Q G+AIFVPSGW+HQV L TIS+N NWFNG+++ + F E AAV AL+ L++ E+ QC+L M N+G+N +F ++ A+ LL
Sbjct: 158 SYSWSVNVCGRKEWVFYHPDDESKLKDRFGRFVVPDVAVGNIDKEKYPQFHEAKPVYVIQETGDAIFVPSGWYHQVKNLEDTISINHNWFNGYNIRELWGFFKREYAAVEHALEDLKEMGLVGREFVDQCQLVMLANTGINYVEFRELLYAKTNVLL 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13670.2589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13670.2589.1 >prot_H-elongata_contig13670.2589.1 ID=prot_H-elongata_contig13670.2589.1|Name=mRNA_H-elongata_contig13670.2589.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp SYSWSFNVCGSKRWTLFAKEATPFLYDRHGRKLATDVHKDALDYETFPQLback to top mRNA from alignment at H-elongata_contig13670:986..2388+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13670.2589.1 ID=mRNA_H-elongata_contig13670.2589.1|Name=mRNA_H-elongata_contig13670.2589.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1403bp|location=Sequence derived from alignment at H-elongata_contig13670:986..2388+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13670:986..2388+ >mRNA_H-elongata_contig13670.2589.1 ID=mRNA_H-elongata_contig13670.2589.1|Name=mRNA_H-elongata_contig13670.2589.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig13670:986..2388+ (Himanthalia elongata Himel1 dioecious)back to top |