mRNA_H-elongata_contig1365.2575.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE) HSP 1 Score: 449 bits (1155), Expect = 7.430e-139 Identity = 266/491 (54.18%), Postives = 303/491 (61.71%), Query Frame = 2
Query: 77 RPLVPPDVKNASSDENANTDVVGK------EEEGEKQLAQDVNGLIKEVQGLRKDCAFPRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVISN-LASRRPRSVASPAASA------------------------------------SSENPVVGVGVKTKTSPDGCKGGVAGGRRGWIRGRRQALAQAPNGVGENVPPGWPSCSDSELGDGYEGAAEGERLGKRTGGKAQQRDDGPDGVLTSRVRSSAAPLQPQSQSSVADGTELAMGLAVTTSMPRRKSFTEPYSEEDPSRGTRNHRLRRKSTPGKSP 1420
RPL P++ +D+ V EEE ++ L V L+ EV+ LR+ +FP LE L +I K YLGPTMESNWVLPG+LLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYR+EGVTE MWRSGDALRPY+QDV+QLL KL EL+ ADPRS+PAICAP++TDFVHFPIVDCNVADDTKVLQLA +L R+A GEV+YLHCWGGHGRTGTVV IMLHLMYGLGA +AMERCQHVHDVRRIPISVGSPQT++QR QVRRVI +A RR +SP A+ SS G G T S GGRR W+RGRRQA AQAPNGVGE+V GW + GDG G++L K G+ MPRRKSFTEPYS+++PSRG R R RRKS PGK P
Sbjct: 3 RPLAAPEIGPPLTDDXXXXXAVSDVXXXXGEEEVDEGLVAAVELLLAEVEALRRASSFPGLEALSSID-KAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPSSPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSVLSPESSRKKEAGRGATTAASAPT----TVGGRRAWVRGRRQAFAQAPNGVGEDVS-GWLDDDNEVEGDGLSDLQGGKKL-KAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKDEPSRGMRMSRARRKSAPGKPP 486
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: D7G3T8_ECTSI (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T8_ECTSI) HSP 1 Score: 376 bits (965), Expect = 2.990e-116 Identity = 181/224 (80.80%), Postives = 200/224 (89.29%), Query Frame = 2
Query: 191 LIKEVQGLRKDCAFPRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQ 862
L+ EV+ LR+ +FP LE L +I K YLGPTMESNWVLPG+LLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEY++EGVTE MWRSGDALRPY+QDV+QLL KL EL+ ADPRS+PAICAP++TDFVHFPIVDCNVADDTKVLQLA +L R+A GEV+YLHCWGGHGRTGTVV IMLHLMYGL A +AMERCQHVHDVRRIPISVGSPQT+AQR Q
Sbjct: 47 LLAEVEALRRASSFPGLEALSSID-KAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 269
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A7S3YH03_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH03_HETAK) HSP 1 Score: 247 bits (630), Expect = 1.390e-70 Identity = 124/220 (56.36%), Postives = 153/220 (69.55%), Query Frame = 2
Query: 227 AFPRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVISNL 886
+FP LE+L +IA+ E Y+GPT ESNWV+PG LLVGAYP SM+D +L IL+ V+TFVCLQQEY EGVTE MWRSG+ LRPY++D + +L D SL +HFPI DC ADD ++ LA LV+ +A GEV+YLHCWGGHGRTGTV+ ++LHLMY A A ERCQ++HD+RRIP++VGSPQT QR QVRRVI L
Sbjct: 22 SFPTLEDLRDIAKHPEDYVGPTDESNWVIPGLLLVGAYPCSMDDVETWEILRGILVLKVTTFVCLQQEYVHEGVTEQMWRSGEYLRPYFKDAVGFAPRLG----LDAASL---------SLLHFPIEDCGTADDDRLAALAHHLVSLLAKGEVMYLHCWGGHGRTGTVICLLLHLMYNYTADQAFERCQYLHDLRRIPVAVGSPQTQGQREQVRRVIEKL 228
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A5A8C9N1_CAFRO (TYR_PHOSPHATASE_2 domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9N1_CAFRO) HSP 1 Score: 220 bits (561), Expect = 4.970e-61 Identity = 115/217 (53.00%), Postives = 146/217 (67.28%), Query Frame = 2
Query: 278 YLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTD---FVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVISNLASRRPRSVASP 919
Y GPT ESNWVL G+LLVGAYP +++D + +L +IL G++TFVCLQ EY+ GV+ W +G LRPY D ++LL + S CAP+ T+ F+HFPIVDC+ A+DT VL+LA LV R+A GE LY+HCWGGHGRTGTVVSIML LMYGL A + M QHVHD+R P+ VG+PQT QR QV R++S PR+ +P
Sbjct: 51 YRGPTEESNWVLHGRLLVGAYPGAVDDGQNDAILRSILELGITTFVCLQSEYQHRGVSREDWIAGTKLRPYIYDAVRLLPSIRW------PSPSQCCAPKPTEGLHFLHFPIVDCSTANDTGVLELAHDLVNRLASGENLYVHCWGGHGRTGTVVSIMLGLMYGLPARNCMAYLQHVHDLRICPMDVGTPQTSQQRRQVIRILSARPPAAPRASLAP 261
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A813AT18_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AT18_9DINO) HSP 1 Score: 216 bits (551), Expect = 2.280e-59 Identity = 112/218 (51.38%), Postives = 138/218 (63.30%), Query Frame = 2
Query: 272 ETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVISNLASRRPRSVASPAA 925
++Y+GPT ESNWV+P ++LVGAYP + D ++ +L +IL GV+TFVCLQ EY+ GVTE WRSG+ LRPY D +QLL + R P DFVH PIVDC D KVL LA L R+ GE LY+HCWGGHGRTGTVVS+ML +MYGL AM Q HD+R P V SPQT QR QV R++ + RR +VA+ AA
Sbjct: 59 DSYIGPTEESNWVIPSRMLVGAYPGATEDELNSEILTSILELGVTTFVCLQSEYQHHGVTEEQWRSGEKLRPYIFDALQLLETCPADYFPEGRK------PDSLDFVHLPIVDCATVSDGKVLSLAYDLCRRLKAGENLYVHCWGGHGRTGTVVSLMLGIMYGLPPMAAMAWVQMFHDMRIAPCGVPSPQTAEQRKQVTRILVKVGKRRDAAVAAEAA 270
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A7S2WTD1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WTD1_9STRA) HSP 1 Score: 209 bits (532), Expect = 7.150e-56 Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 2
Query: 221 DCAF---PRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVISNL 886
DC +L + I + R Y+GPT ESNWVLPGKLLVGAYPA ++D H LL +IL GV+TFVCLQ+EY WR+G +RPY D ++ ++ L C + F+H PI DC+V D VL+LA L R+ GEVLY+HCWGGHGRTGT+V+IML ++YG+ +A++R Q HD+R P+ V SPQT +QR+QV R++ +
Sbjct: 38 DCQLGISQKLPSFKEIEQHRGMYVGPTEESNWVLPGKLLVGAYPAEVDDVAHEKLLRSILQCGVTTFVCLQKEYDHSSTDPKEWRAGTKIRPYINDAYRITKQDNTL---------GTCRSSELSFLHVPIADCDVTSDQVVLRLAQSLCWRLIAGEVLYIHCWGGHGRTGTLVAIMLGMLYGIPKAEALKRTQLYHDLRVCPLHVPSPQTFSQRMQVLRILEKV 253
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A8J2T0D3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0D3_9STRA) HSP 1 Score: 211 bits (536), Expect = 3.990e-55 Identity = 107/223 (47.98%), Postives = 144/223 (64.57%), Query Frame = 2
Query: 230 FPRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIAC-GEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVI-SNLAS 892
P LE + I+++++ Y+GPT ESNWVLPG+L+VGA+P +D + LL +IL G++TFVCLQ+EY + E+ WRSG A+RPYY + L + + +F+HF I DC+V +D V + L R+ C EV+YLHCWGGHGR GT+ ++LH +YGL A DAM RCQ VHD+RR+PI VGSPQT QR QV RV+ S+LAS
Sbjct: 34 LPPLESFQVISQRKQRYVGPTDESNWVLPGRLMVGAFPGVSDDRENDRLLNSILSCGITTFVCLQREYDPDA-PESAWRSGAAIRPYYPSAVALAARHHR--------------GRRLEFIHFGIEDCSVVEDDAVAAFSRSLADRLRCTDEVIYLHCWGGHGRAGTITCLLLHWLYGLNALDAMARCQFVHDLRRVPIVVGSPQTQTQRDQVCRVVASSLAS 241
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A7S3NIH7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH7_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.680e-53 Identity = 103/217 (47.47%), Postives = 136/217 (62.67%), Query Frame = 2
Query: 230 FPRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIA-CGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVI 877
P LE + I Y GPT ESNW +PG+L+VGA+P ++D +A+LL IL QG++TFVCLQ+EY E+ WR G ALRPY+ +++ +L DP +D F+HF I DC+VA+D+ V A RL RI +++YLHCWGGHGR GT+ ++ HL+YGL AM RCQ VHD R+IPI+VGSPQT Q QV R+I
Sbjct: 78 LPPLEPMRKIGANPTRYCGPTDESNWAIPGRLMVGAFPGMIDDVENANLLKNILNQGITTFVCLQREYNPRA-RESDWRKGLALRPYFNSAVEICAEL------DPH--------RDLHFLHFGIQDCSVAEDSAVEAFARRLARRIRDTDQIIYLHCWGGHGRAGTITCLLFHLLYGLDDKTAMRRCQLVHDCRKIPINVGSPQTRTQCDQVSRII 279
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A2R5GPB8_9STRA (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPB8_9STRA) HSP 1 Score: 197 bits (502), Expect = 7.680e-50 Identity = 102/220 (46.36%), Postives = 137/220 (62.27%), Query Frame = 2
Query: 236 RLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSGDALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVISNLASR 895
RL E+ + R R+ Y GPT ESNWV+PG+L+VGAYPA +D H LL IL GV+TFVCLQ EY A +RPY +D +L + E + A +S +CA F+H PIVDC V D V LA L R+ GEV+YLHCWGGHGRTGT+V++ML ++Y + ++A++R Q HD R P+ V SPQT +QR+QV R++ ++ R
Sbjct: 224 RLPEVSAVERDRKAYAGPTDESNWVIPGRLMVGAYPAEADDQSHDALLNAILECGVTTFVCLQAEYNHYAPATA------PIRPYIRDAFRLCQMRE--REARQKSPNEVCAASKLGFLHLPIVDCKVTGDEVVRALAEALCWRLVSGEVIYLHCWGGHGRTGTLVAVMLGMLYKISKSEALKRTQLYHDCRSCPLQVQSPQTFSQRMQVLRILDSVRGR 435
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Match: A0A6C0F341_9ZZZZ (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F341_9ZZZZ) HSP 1 Score: 185 bits (469), Expect = 8.690e-49 Identity = 102/221 (46.15%), Postives = 133/221 (60.18%), Query Frame = 2
Query: 230 FPRLEELENIARKRETYLGPTMESNWVLPGKLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRSEGVTEAMWRSG-----DALRPYYQDVIQLLRKLEELKIADPRSLPAICAPQDTDFVHFPIVDCNVADDTKVLQLALRLVTRIACGEVLYLHCWGGHGRTGTVVSIMLHLMYGLGATDAMERCQHVHDVRRIPISVGSPQTDAQRLQVRRVI 877
F L L I RE GP ESNWV+PGKL+ GA+P +D + + L IL GV+ FVC+Q+EY + + E WR +RPY+ DV +++ E K+ P + + F H PI DC+ D V LA LV I GEV+YLHCWGGHGRTG +V +MLHLMYGL A +A+ERCQ +HD+R++PI V SPQT Q+ QVRR+I
Sbjct: 43 FSGLVPLNEI--NREDIFGPIAESNWVVPGKLIAGAFPGYTDDIENTNSLIKILNCGVTKFVCMQEEY-NVAIKEEDWRKNCYGKTSVVRPYFADV----QRIMENKVIHPTLSTDVF---NVTFEHCPIKDCSTVADDIVFSLAKDLVKAIHDGEVVYLHCWGGHGRTGIMVCLMLHLMYGLTANEALERCQFLHDIRKMPIIVSSPQTFRQKDQVRRII 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1365.2575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1365.2575.1 >prot_H-elongata_contig1365.2575.1 ID=prot_H-elongata_contig1365.2575.1|Name=mRNA_H-elongata_contig1365.2575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=552bp MVPSRSQTTTGRKIDSDGGTDARPLVPPDVKNASSDENANTDVVGKEEEGback to top mRNA from alignment at H-elongata_contig1365:3288..11736- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1365.2575.1 ID=mRNA_H-elongata_contig1365.2575.1|Name=mRNA_H-elongata_contig1365.2575.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8449bp|location=Sequence derived from alignment at H-elongata_contig1365:3288..11736- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1365:3288..11736- >mRNA_H-elongata_contig1365.2575.1 ID=mRNA_H-elongata_contig1365.2575.1|Name=mRNA_H-elongata_contig1365.2575.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3312bp|location=Sequence derived from alignment at H-elongata_contig1365:3288..11736- (Himanthalia elongata Himel1 dioecious)back to top |