mRNA_H-elongata_contig13634.2565.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: D8LS49_ECTSI (Similarity to sodium/hydrogen exchanger and potassium exchanger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS49_ECTSI) HSP 1 Score: 362 bits (929), Expect = 7.940e-113 Identity = 179/203 (88.18%), Postives = 189/203 (93.10%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGISR 609
ME+RMGYDHY+GGDSESDEIR+GD FVVVCGYGRIGRLVCELLGKKFI FVAFDNNPL+AME R RGLPVFYGDV RPEVLNAFNVGKAKAVICTLS+VKGT AV NLRREFPDLPIF RA+DA+HQK L+SI DVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVN LLEDTRKKF+ EKGLENEEDDNLFEQLGI +
Sbjct: 686 MEARMGYDHYLGGDSESDEIRQGDGFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVMRPEVLNAFNVGKAKAVICTLSEVKGTTTAVVNLRREFPDLPIFARAQDARHQKNLASITDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGIQK 888
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A835Z5B4_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B4_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.160e-84 Identity = 133/201 (66.17%), Postives = 167/201 (83.08%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGI 603
+E +MG+ HY+G DSES EI++ + FVVVCGYGRIGRLVC+LL KKFI +VAF+ +P +AME R+RGLPVFYGDV RPEVL +FNVGKA+A+I T+SD++ NKAV N+RREFPDLP+F RAKDA+HQKRL ++V AMVP LPEDSI+VSLPFGGA LRSLG + +EVN L+EDTRKK++ +GLE EE +N+ QL +
Sbjct: 371 IEGKMGFSHYVGIDSESAEIKEREGFVVVCGYGRIGRLVCDLLDKKFIPYVAFEADPQKAMEARQRGLPVFYGDVTRPEVLRSFNVGKAQALISTISDIRTANKAVVNIRREFPDLPVFARAKDAQHQKRLQGTLNVTAMVPVLPEDSIMVSLPFGGAFLRSLGLSQEEVNVLVEDTRKKYLISRGLEEEETENIMSQLSL 571
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A6H5L9D1_9PHAE (RCK N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9D1_9PHAE) HSP 1 Score: 224 bits (570), Expect = 1.780e-67 Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 1
Query: 229 RPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGISR 609
RPEVLNAFNVGKAKAVICTLSDVKGT AV NLRREFPDLPIF RA+DA+HQK L+SI DVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVN LLEDTRKKF+ EKGLENEEDDNLFEQLGI +
Sbjct: 2 RPEVLNAFNVGKAKAVICTLSDVKGTTTAVVNLRREFPDLPIFARAQDARHQKNLASITDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGIQK 128
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A7S1ZA81_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZA81_TRICV) HSP 1 Score: 228 bits (582), Expect = 2.420e-66 Identity = 109/207 (52.66%), Postives = 151/207 (72.95%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGISRPDAV 621
+E + HY+G D E+ E+++ D+FV V GYG +G++VC+LL +KF+K+V + NP +A+E R +GLPVFYGDV RPEV AFN+GKAKA+I T+SD N+AV +LRR +PD IF RAKDA H +RL +DVVAMVP +PED+++++LPFGGAVLR LG A+EV+A+LE RK+ + KGL E++ + QLGI D +
Sbjct: 211 LEEGSDFSHYLGQDKEAMELKESDDFVAVVGYGNVGKVVCDLLDRKFVKYVGLEVNPNKAIEARNKGLPVFYGDVGRPEVAEAFNIGKAKAIISTISDKAEANRAVISLRRMYPDTKIFARAKDADHAERLQRTLDVVAMVPIVPEDNMLLTLPFGGAVLRGLGAPAEEVSAILEAKRKEVLQTKGLNESEEEAVMLQLGIVTEDQI 417
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A7S4VD07_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VD07_9STRA) HSP 1 Score: 223 bits (568), Expect = 9.600e-66 Identity = 107/201 (53.23%), Postives = 146/201 (72.64%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGI 603
+E + + HY+G D ++ +I+ ++F VV GYG +G+++C+LL +KFIK+V + +P +A++ R +GLPVFYGDV R EV AFNVGKAKAVICT+SD N+AV LRR +PD+ IF RAKDA H +RL +DV AMVP LPED+ +++LPFGGAVLRSLG A+EVNA+LE RK + +GL E + + QLGI
Sbjct: 122 LEEKSDFTHYLGQDQDAVDIKDSEDFAVVIGYGAVGKVICDLLDRKFIKYVGLEVDPNKAIQARNKGLPVFYGDVARSEVAEAFNVGKAKAVICTISDKAEANRAVIALRRLYPDVKIFARAKDADHAERLQRTLDVAAMVPILPEDNALMTLPFGGAVLRSLGAPAEEVNAILEQKRKDVLSGRGLAESEQETVLLQLGI 322
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A7S2I2V9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2V9_9STRA) HSP 1 Score: 221 bits (564), Expect = 3.750e-64 Identity = 104/201 (51.74%), Postives = 145/201 (72.14%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGI 603
+E + + HY+G D ++ +I+ ++F VV GYG +GR++C+LL +KFIK+V + +P +A++ R +GLPVFYGD+ RPEV AFNVGKA+AVICT+SD N+A+ LRR +PD+ IF RAKDA H RL +D+ AMVP LPED+ +++LPFGGAVLRSLG +EVNA+LE RK + +GL E + + QLGI
Sbjct: 201 LEEKSDFTHYLGQDQDAVDIKDSEDFAVVVGYGNVGRVICDLLDRKFIKYVGLEVDPNKAIQARNKGLPVFYGDIGRPEVAEAFNVGKAQAVICTISDKAEANRALIALRRLYPDVKIFARAKDADHADRLQRTLDIAAMVPILPEDNALMTLPFGGAVLRSLGAPTEEVNAILEQKRKDVLSGRGLAESEQETVLLQLGI 401
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A7S1BLJ6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLJ6_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.040e-63 Identity = 104/195 (53.33%), Postives = 143/195 (73.33%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNL 585
ME G+ HY+G D +++EI++ ++FVVV GYG +G+L+CELL K IK++ + NP +A+E R RGLPVFYGD+ RPEV AF+VGKAK + T+S+ TN+AV LRR +P+L IF RAK+ +H++RL +DVVAMVP LPEDS++++LPFGGAVL SLG +EV A+LE RK+ I+ + E DD L
Sbjct: 83 MEENSGFTHYMGEDRDANEIKESEDFVVVIGYGTVGKLICELLDSKLIKYIGIEVNPNKAIEARNRGLPVFYGDITRPEVAEAFSVGKAKGCVVTISEKLDTNRAVITLRRLYPNLKIFARAKNDQHRERLMKTLDVVAMVPVLPEDSLLLTLPFGGAVLSSLGAPVEEVKAILETKRKEIIELRNPEFGRDDLL 277
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A7S2XSK7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK7_9STRA) HSP 1 Score: 226 bits (576), Expect = 7.690e-63 Identity = 108/201 (53.73%), Postives = 149/201 (74.13%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNLFEQLGI 603
+E + + HY+G DSE+ EI + DEF VV GYG +G++VC+LL +KF K+V + +P +A+E R +GLPVF+GD+ RPEV AFNVG AKAVI T++D N+AV +LRRE+P+L IF RAKDA H RL + +DVVAMVP +PED+++++LPFGGAVL+SLG EVNA+LE RK+ + +GL E++ + QLGI
Sbjct: 683 LEEKSDFTHYLGQDSEAKEIAESDEFAVVVGYGAVGKVVCDLLDRKFYKYVGIEVDPNKAIEARNKGLPVFFGDIGRPEVAEAFNVGSAKAVIVTIADKAEANRAVISLRREYPNLKIFARAKDADHASRLQNTLDVVAMVPIMPEDNVLMTLPFGGAVLKSLGAEPSEVNAILEAKRKEVLQGRGLAVNEEETVLTQLGI 883
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A7S1FUH2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUH2_9STRA) HSP 1 Score: 215 bits (548), Expect = 8.750e-63 Identity = 104/195 (53.33%), Postives = 143/195 (73.33%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFIDEKGLENEEDDNL 585
ME G+ HY+G D +++EI++ ++FVVV GYG +G+L+CELL K IK++ + NP +A+E R RGLPVFYGD+ RPEV AF+VGKAK + T+S+ TN+AV LRR +P+L IF RAK+ +H++RL +DVVAMVP LPEDS++++LPFGGAVL SLG +EV A+LE RK+ I+ + E DD L
Sbjct: 161 MEENSGFTHYMGEDRDANEIKESEDFVVVIGYGTVGKLICELLDSKLIKYIGIEVNPNKAIEARNRGLPVFYGDITRPEVAEAFSVGKAKGCVVTISEKLDTNRAVITLRRLYPNLKIFARAKNDQHRERLMKTLDVVAMVPVLPEDSLLLTLPFGGAVLSSLGAPVEEVKAILETKRKEIIELRNPEFGRDDLL 355
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Match: A0A4D9DB16_9STRA (RCK N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB16_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.270e-62 Identity = 104/183 (56.83%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 1 MESRMGYDHYIGGDSESDEIRKG-DEFVVVCGYGRIGRLVCELLGKKFIKFVAFDNNPLRAMEERKRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDVKGTNKAVANLRREFPDLPIFTRAKDAKHQKRLSSIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNALLEDTRKKFI 546
+E++ G+ HY+G D+E I+ ++FVVVCGYGRIG++VC+LL KKFI +VAFD NP + +E R RGLPVF+GDV RPEVL +FNV KA+AVI T ++++ TNKAV LR+ +P +PIF RA D HQKRL + ++V AMVP LPEDS+++SLPFGG VLR +G + +EV+ L++D RKK +
Sbjct: 427 IENKYGFSHYLGADAEGQAIKATQNDFVVVCGYGRIGKMVCDLLDKKFIPYVAFDVNPAKVIEARNRGLPVFFGDVSRPEVLRSFNVDKARAVIITTNEMRATNKAVVTLRKLYPKMPIFARAADLAHQKRLQNTLEVSAMVPILPEDSVLLSLPFGGRVLRKMGVSPEEVDVLMDDMRKKAL 609 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13634.2565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13634.2565.1 >prot_H-elongata_contig13634.2565.1 ID=prot_H-elongata_contig13634.2565.1|Name=mRNA_H-elongata_contig13634.2565.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=370bp MESRMGYDHYIGGDSESDEIRKGDEFVVVCGYGRIGRLVCELLGKKFIKFback to top mRNA from alignment at H-elongata_contig13634:5604..8134- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13634.2565.1 ID=mRNA_H-elongata_contig13634.2565.1|Name=mRNA_H-elongata_contig13634.2565.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2531bp|location=Sequence derived from alignment at H-elongata_contig13634:5604..8134- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13634:5604..8134- >mRNA_H-elongata_contig13634.2565.1 ID=mRNA_H-elongata_contig13634.2565.1|Name=mRNA_H-elongata_contig13634.2565.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2220bp|location=Sequence derived from alignment at H-elongata_contig13634:5604..8134- (Himanthalia elongata Himel1 dioecious)back to top |