mRNA_H-elongata_contig13597.2535.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13597.2535.1
Unique NamemRNA_H-elongata_contig13597.2535.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A6H5KXC5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC5_9PHAE)

HSP 1 Score: 783 bits (2023), Expect = 2.520e-278
Identity = 403/508 (79.33%), Postives = 447/508 (87.99%), Query Frame = 1
Query:   16 SSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDWHRIFGPGLSVSSPQPATKAVA 1539
            S LL AAEAVRSG +SSE+LV QALKRL++ EG++GAFL+VQGRAAVD AR ID K   +GC+ETLALPL+GVPL VKDNLCT GVPTTAASRILEGYRPSYDA+ VSKLK AGGI LGKTNMDEY MGSTTETSA+Q+TRNPRN +HAPGGSSG       +GVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSR+GLIAYASSTDC+GPIAS+V D AALLG VAGEDRAGDST LQ+ VPDY  +LKE+ ASGGSRPLEG+KMG+IREALV+RVQPDVAAAVKEAI+TMASLGA+V EVSLPSLP+QCAAYYV ALSEASANLARFDGIRYGQRN EA S+KEAML+SRHDGFG EV+QR+ILGTF+LS+GY+DKYYKRAQ IR GLS D + VFE+LDVL+CPTAPTTAYRLGE  EKGV  YADD+FT PASLAGLP LSVPCG+DR GLPIG+Q+MGK LSED+LLRVG AYE+AT WHR F PG+S SSP  A  A A
Sbjct:   55 SPLLEAAEAVRSGRISSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKV-AEGCKETLALPLLGVPLGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMGSTTETSAFQVTRNPRNIDHAPGGSSGXXXXXXXAGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRKGLIAYASSTDCIGPIASSVADCAALLGAVAGEDRAGDSTSLQQPVPDYTALLKESAASGGSRPLEGIKMGVIREALVERVQPDVAAAVKEAIDTMASLGADVTEVSLPSLPEQCAAYYVTALSEASANLARFDGIRYGQRNSEATSSKEAMLKSRHDGFGAEVRQRIILGTFSLSSGYSDKYYKRAQAIREGLSRDFSTVFEKLDVLVCPTAPTTAYRLGEYAEKGVGVYADDVFTTPASLAGLPGLSVPCGQDRAGLPIGVQLMGKPLSEDLLLRVGQAYESATPWHRQFAPGVSASSPAAAVPAGA 561          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A836CQP8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP8_9STRA)

HSP 1 Score: 613 bits (1580), Expect = 6.670e-212
Identity = 324/504 (64.29%), Postives = 395/504 (78.37%), Query Frame = 1
Query:   16 SSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEA-VPDYVTMLKEAEAS-------GGSRPLEGVKMGLIREALVQR-VQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDWHRIFGPGL 1500
            S L  A  AV+SG  S+E LV ++L R+   +G++ A+L+VQG AA++AAR ID+ A   G   TLA PL+G+P+AVKDNLCT+GVPTTAAS+ILEGY PSYDAT V KL++AG I++GK NMDE+AMGSTTETSAY++TRNPRN  HAPGGSSGGSAAAVASG V GALGTDTGGS+RQPA+WCGVVG+KPTYGR+SR GLIAYASS DCVGPIA+ V DAAALL  +AG D A D+T  + A +PD+  +L+  +A+       G  RPLEG+++GLI EAL    V P+VAAA + A + +A+LGA + +VSLP LPQQCAAYYVNALSEASANLARFDG+RYG R  +A SA+ ++LR+RHDGFG EV+QR++LGTF+LSAGYAD YY RAQ +RAGL  D AR F   DVL+CPTAPTTAYRLG+   KGV SYADD+FT PASLAGLPALS+PCG D  GLPIG+Q++G +  E+ L+R   AYE +TDW     PGL
Sbjct:   10 SPLSDAVRAVKSGQRSAESLVQESLDRIAAADGKVAAYLSVQGEAALEAARVIDN-AVAAGDAATLAKPLLGLPVAVKDNLCTQGVPTTAASKILEGYVPSYDATAVRKLREAGAIIVGKVNMDEFAMGSTTETSAYKVTRNPRNLGHAPGGSSGGSAAAVASGTVLGALGTDTGGSIRQPAAWCGVVGIKPTYGRVSRSGLIAYASSLDCVGPIATCVADAAALLAAIAGPDAASDATAAEPAPLPDFGAVLRGVDAALEGGAGGGRGRPLEGLRVGLISEALTAGGVAPEVAAAARAAADALAALGARIADVSLPRLPQQCAAYYVNALSEASANLARFDGVRYGARARDAASARASLLRTRHDGFGAEVRQRILLGTFSLSAGYADAYYARAQAVRAGLRTDFARAFAGADVLLCPTAPTTAYRLGDFEAKGVASYADDLFTVPASLAGLPALSLPCGVDAAGLPIGVQLIGGAWQEEALVRAAYAYERSTDWRARLPPGL 512          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: D8LTD3_ECTSI (Glutamyl tRNA amidotransferase, subunit A, n-terminal region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD3_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 1.630e-181
Identity = 277/338 (81.95%), Postives = 303/338 (89.64%), Query Frame = 1
Query:   16 SSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYG 1029
            S LL AAEAVRSG VSSE+LV QALKRL++ EG++GAFL+VQGRAAVD AR ID K   +GC+ETLALPL+GVP+ VKDNLCT GVPTTAASRILEGYRPSYDA+ VSKLK AGGI LGKTNMDEY MGSTTETSA+Q+TRNPRN +HAPGGSSG       +GVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSR+GLIAYASSTDC+GPIAS+V D AALLG VAGEDRAGDST LQ+ VPDY  +LKE+ ASGGSRPLEG+KMG+IREALV+RVQPDVAAAVKEAI+TMASLGAEV EVSLPSLP+QCAAYYV ALSEASANLARFDGIRYG
Sbjct:    8 SPLLEAAEAVRSGRVSSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKV-AEGCKETLALPLLGVPMGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMGSTTETSAFQVTRNPRNIDHAPGGSSGXXXXXXXAGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRKGLIAYASSTDCIGPIASSVADCAALLGAVAGEDRAGDSTALQQPVPDYTALLKESAASGGSRPLEGIKMGVIREALVERVQPDVAAAVKEAIDTMASLGAEVTEVSLPSLPEQCAAYYVTALSEASANLARFDGIRYG 344          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A7S3Y278_HETAK (Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y278_HETAK)

HSP 1 Score: 506 bits (1303), Expect = 6.510e-168
Identity = 272/489 (55.62%), Postives = 354/489 (72.39%), Query Frame = 1
Query:    4 MAMSSSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAAT 1470
            +A  S LL A  A+++  +++ +L+   L+++++T+G +GAFL+V G  A+  A  +D K    G  E  A PL+G+P+AVKDNLC  G PTTAAS++LEGY P+Y A  V++L+ AG IV+GK N+DE+AMG++TETSAY++TRNPR   H PGGSSGGSAAAVA+G V  ALG+DTGGS+RQPA++CG VGLKP YGR+ R GL+AY SSTD VGP+ +TV DAAALL V+AG     D+T     VPDY+  L EA    G RPLEG ++G+I+EA  +   P+VAAA KEA+ T+  LGA V  VS P L +QC AYYVNA SEASANLARFDGIRYG  +    +A+ +ML +R  GFGDEVKQR+ILGTFALSAGY+D +YK+A D R  L+ ++   F+++D+L+CPT+PT AY +G    KG   Y DD+FT PA+LAGLPALSVPC     GLPIGLQ +G  L ED++L+ G  +E AT
Sbjct:   37 VASPSPLLDAVNAIKNKQMTATELMRSTLEKIEETDGHVGAFLSVFGEDALRKAEEVDSKLAA-GDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMGASTETSAYRLTRNPRALGHVPGGSSGGSAAAVAAGAVLAALGSDTGGSIRQPAAFCGAVGLKPGYGRVPRHGLLAYTSSTDVVGPLTATVKDAAALLQVLAGPAPDKDATSAAAPVPDYLAGLGEA----GPRPLEGTRVGVIQEA--ENCAPEVAAAFKEAVATLEGLGAAVAPVSFPRLSEQCTAYYVNAFSEASANLARFDGIRYGLASKRTDTARGSMLNTRA-GFGDEVKQRIILGTFALSAGYSDAFYKKAMDTRTLLAEEVKEAFKKVDILLCPTSPTLAYEVGAYAAKGASGYQDDVFTVPANLAGLPALSVPCAVAPGGLPIGLQFIGDVLREDLVLKTGYHFEQAT 517          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: W7TRV8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRV8_9STRA)

HSP 1 Score: 500 bits (1288), Expect = 1.990e-167
Identity = 264/484 (54.55%), Postives = 347/484 (71.69%), Query Frame = 1
Query:   37 EAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHK--ARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDST-GLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTG------LPIGLQVMGKSLSEDVLLRVGAAYE 1461
            E ++ G +S  ++  Q L +++  +  IGAFL + G  A+  AR +D K   R  G   T  +PL+G+P+A+KDN+CT G+PTTA S++L+GY PSYDAT V++L+ AG +++GKTN+DE+ MGSTTE+S Y +TRNPR+   +PGGSSGGSAAAVASG+V  ALGTDTGGS+RQPASW G VGLKPTYGR+SR GL+AY SSTD +GP+  TV+D+A LL  +AG D   D+T  L  A  DYV+ +KEAE  G  RPL G ++GLIRE L  RV+  V+  V++A+  +  LGAE+ EVS+P L   CA+YYVN LSEASANLAR+DG+RYG R  +A SAK  ML SR +GFG+EVKQR++LGTF+LSAGYAD YY ++Q +R+ LS      FE  DVLI PTAPT AY LG+     V+ YADD+FT PASLAGLPA+S+P G+  +       LP+GLQ++G+  +E  +L+V    E
Sbjct:   55 ERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPG---TSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRG-ERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILE 534          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A0G4GTE2_VITBC (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GTE2_VITBC)

HSP 1 Score: 474 bits (1220), Expect = 1.290e-156
Identity = 258/495 (52.12%), Postives = 346/495 (69.90%), Query Frame = 1
Query:   16 SSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTM----LKEAEASGGSRPLEGVKMGLIREALVQ---RVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQR-NPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDW 1476
            SS+    + +R G ++ E++V   L+R++ ++  +  + +V G +A+  AR +D     +G       PL G+P+AVKD +  + +P T  SR+LEGY PS+DA  V +LK AG +V+GKTN DE+AMGSTTETS ++ T NP +    PGGSSGGS+A V++G V  ALG+DTGGS+RQPASWCGVVGLKPTYGR+SRRGL+AY SSTDC+GP+ ++V D A LL  +AG D   D + L   VP+Y  +    L   E+  G RPL  +++GL++E L     R+QP V AA K++++   +LGAE+ EV +P+L + CAAYY+  +SEAS+NLA++DGIRYG R + E   AK  M+ SR  GFG EVKQR++LGTFALSAGY+D YYK+AQ +RA L+ +  RVFE +D LI PTAPTTAYRLG+  E  VE+Y DD+ T PASL+GLPALSVPCG     LPIGLQ++GK L E  LL++GA Y+ AT W
Sbjct:   55 SSIAQTTKGIRDGTLTVEEVVRDTLRRVEASD--VHGWCSVDGESALSRARELDKGRANEGDLP----PLYGLPIAVKDTISVRDMPCTGGSRVLEGYVPSFDAPCVERLKAAGAVVIGKTNCDEFAMGSTTETSFFEQTVNPFDLSRTPGGSSGGSSAVVSNGEVPAALGSDTGGSIRQPASWCGVVGLKPTYGRVSRRGLLAYGSSTDCIGPMCTSVEDCAILLEAMAGHDPL-DVSSLDAPVPEYAKLVDQFLNNKESLSG-RPLSKMRIGLLKETLDDGEGRMQPAVMAAFKDSLSVFKALGAELIEVDIPNLKEYCAAYYITVMSEASSNLAKYDGIRYGLRTSSEDPRAKRVMVDSRETGFGQEVKQRILLGTFALSAGYSDAYYKKAQKMRAALASNFERVFELVDALILPTAPTTAYRLGQFKENKVETYIDDLLTVPASLSGLPALSVPCGISAEDLPIGLQIVGKPLDELRLLQIGAGYDEATGW 541          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A0G4G7S4_9ALVE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G7S4_9ALVE)

HSP 1 Score: 471 bits (1211), Expect = 7.600e-155
Identity = 258/484 (53.31%), Postives = 343/484 (70.87%), Query Frame = 1
Query:   43 VRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTMLKEAEASGGSR---PLEGVKMGLIREALVQ---RVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDW 1476
            +RSG  S E+ V  +L R+  ++  + AF++V G  A+  AR +D + RT    ET  LPL+GVP+AVKDNLCT G+PTTA S +L+ Y PSYDA  V++LK AG IV+GKTNMDE+ MGSTTETS Y  T NP + E + GGSSGGSAAAVA+G V  ALG+DTGGS+RQPA+WCG+ GLKPTYGR+SR GLIAYASSTDCVGPI  TV D A+ L V+AG D   DS+ L    PD++ +L + E S   +   PL+G+++G+I EA+      +QP V  AV  A+  + +LGA   ++SLP+L   C +YYV AL+EAS+NLAR+DG+RYG+R    M  + ++ ++R  G G EVK+R+++G+FALSAGY+DKYY+ A+ +R  LS +  + FE+ DVLICP+AP+TAY LG   +  +  Y+DD+F  PASLAGLPALSVPCG      PIGLQ++GK L E+ LL+VG ++E A  W
Sbjct:   87 IRSGKRSVEETVRLSLGRISASD--LNAFVSVFGEKALREARELDERLRTDP--ETRNLPLLGVPVAVKDNLCTAGLPTTAGSAVLQNYIPSYDAACVARLKAAGAIVVGKTNMDEFGMGSTTETSPYLQTTNPFDHESSAGGSSGGSAAAVANGEVPLALGSDTGGSIRQPAAWCGLTGLKPTYGRVSRNGLIAYASSTDCVGPIGRTVRDVASCLSVIAGNDPK-DSSSLSAPPPDFLKILDDFEKSREWKFGTPLKGLRIGIIAEAMDPVKVPIQPTVEEAVSSALTILKALGATPVKISLPNLSGVCGSYYVTALAEASSNLARYDGMRYGRRETAEMM-RTSVGKTRETGLGAEVKKRILIGSFALSAGYSDKYYQTAERVRGVLSEEFRKAFEKADVLICPSAPSTAYPLGLAGQDSIRMYSDDLFFVPASLAGLPALSVPCGLSSNNKPIGLQLIGKPLDEETLLKVGLSFEDAAKW 564          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A4D9D4K8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4K8_9STRA)

HSP 1 Score: 489 bits (1258), Expect = 2.410e-153
Identity = 257/457 (56.24%), Postives = 335/457 (73.30%), Query Frame = 1
Query:   13 SSSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHK--ARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDST-GLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGR 1374
            SS++    E ++ G +S  ++  Q+L +++  +  IGAFL + G  A+  AR +D K   R  G   T  +PL+G+P+A+KDN+CT G+PTTA S++L+GY PSYDAT V++L+ AG +++GKTN+DE+ MGSTTE+S Y +TRNPR+   +PGGSSGGSAAAVASG+V  ALGTDTGGS+RQPASW G VGLKPTYGR+SR GL+AY SSTD +GP+  TV+D+A LL  +AG D   D+T  L  A  DYV+ +KEAEA G  RPL G ++GLIRE L  RV+  V+  V++A+  +  LGAE+ EVS+P L   CA+YYVN LSEASANLAR+DG+RYG R  +A SAK  ML SR +GFG+EVKQR++LGTF+LSAGYAD YY ++Q +R+ LS      FE  DVLI PTAPT AY LG+     V+ YADD+FT PASLAGLPA+S+P G+
Sbjct:   47 SSTIHDMVERIQQGQISVAEVTKQSLLQIEAQDRAIGAFLTLSGDQAMSEARALDEKLAGREPG---TSTMPLLGLPVAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAEARG-ERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEDLGAEIVEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGK 499          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A2W4J0K3_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4J0K3_9PROT)

HSP 1 Score: 456 bits (1174), Expect = 5.120e-151
Identity = 253/483 (52.38%), Postives = 328/483 (67.91%), Query Frame = 1
Query:   34 AEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDWHR 1482
            A+A+ +G +SSE+     L R+  T+  +GAFL+V    A+  AR  D + R       L     GVP+A+KDN+ T G+PTT ASRILEGY P +DATV  +L  AG +VLGK N+DE+AMGSTTETSAY++TRNP +   +PGGSSGGSAAAVA+  V GALGTDTGGS+RQPAS CGVVG+KPTYGR SR G++AYASS D VG    TV DAA LL  +AG D   DST + E VPD+V   + A        +EG+++G+ +E  VQ V P+V  A++ AI T+ SLGA+V E+SLP      AAYYV A +EAS+NLARFDGIRYG    E    ++  L++R  GFG EVK+R++ GT+ALS+G  ++Y  RAQ +R  +  D    F+R+D ++ P APT A RLGE  E  VE+Y  D+FT   +LAGLP +SVPCG    GLP+G+Q++G+ + E  L RVGAAY+ ATDWHR
Sbjct:   12 ADALAAGELSSEEATRACLDRIRATDERLGAFLHVAEETALARARESDRRRREGNALGALD----GVPVALKDNISTAGMPTTCASRILEGYVPPFDATVARRLGDAGAVVLGKVNLDEFAMGSTTETSAYRVTRNPWDLSRSPGGSSGGSAAAVAARQVYGALGTDTGGSIRQPASHCGVVGIKPTYGRCSRYGVVAYASSLDQVGTFGRTVEDAAILLQAIAGHDPL-DSTSVSEPVPDWVAATRGAS-------VEGMRLGIPKEYFVQGVDPEVEGAIRAAIATLVSLGAKVEEISLPHTEYAIAAYYVVAPAEASSNLARFDGIRYGLSVREG-GLRDVYLKTRAAGFGPEVKRRILAGTWALSSGNYEQYSIRAQKVRTLIRRDFEEAFKRVDAIVTPVAPTAARRLGEKAEDPVEAYLADVFTLACNLAGLPGMSVPCGFTSKGLPVGMQLLGRPMDEATLFRVGAAYQQATDWHR 481          
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Match: A0A7C1PFJ9_9CHLR (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1PFJ9_9CHLR)

HSP 1 Score: 456 bits (1172), Expect = 1.170e-150
Identity = 241/487 (49.49%), Postives = 332/487 (68.17%), Query Frame = 1
Query:   22 LLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAAVDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILEGYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNTEHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGRLSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVPDYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMASLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMSAKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHDLARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPALSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDWHR 1482
            +L A E +R   +SS +L    L R+   + ++ AFL +    A++ AR  D + R +G  +    PL+G+PLA+KD +C +GVPTT  SRILE + P Y ATV+ +L   G ++LGKTN DE+AMGS+TE SA+  TRNP +    PGGSSGGSAAAVA+ +  GALG+DTGGSVRQPA+ CG+VGLKP+YGR+SR GL+A+ASS D +GP+A TV D A LL  +AG D   DST +   VPDY+ +L+       + PL+GV++G+ RE  ++ +QP+V AAV++AI  M  LGA + EVSLP        YY+ A +EASANLAR+DG+RYG R  +     +    +R  GFG EVK+R++LGT+ALSAGY D YY +AQ +R  +  D    F+R+DV++CPT+PTTA+R+GE  +  ++ Y  D+FT   +LAGLP +S+PCG D  GLPIGLQ++G +  E+ +LRV  AYE AT+WH+
Sbjct:    8 ILEAHERLRRREISSVELTQACLDRIVAVDNDVNAFLTLTPELALEGARAADAR-RARGEDD----PLLGIPLAIKDVICVEGVPTTCGSRILEDFIPPYSATVIERLLARGAVILGKTNTDEFAMGSSTENSAFFTTRNPWDLGRVPGGSSGGSAAAVAARMAPGALGSDTGGSVRQPAALCGIVGLKPSYGRVSRYGLVAFASSLDQIGPLARTVADVAVLLSAIAGHDPR-DSTSMNLPVPDYLNLLRGGNGPPATLPLQGVRLGVPREYFIEGMQPEVEAAVRQAIAVMVGLGASIAEVSLPHTDYALPVYYLIAPAEASANLARYDGVRYGLR-VQGEDMWDNYRATRGAGFGAEVKRRIMLGTYALSAGYYDAYYLKAQKVRTLIRADFDAAFQRVDVIVCPTSPTTAFRIGEKTDDPLQMYLSDVFTLSCNLAGLPGISLPCGFDSNGLPIGLQLLGPAFKEETILRVAYAYEQATEWHK 487          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13597.2535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXC5_9PHAE2.520e-27879.33Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A836CQP8_9STRA6.670e-21264.29Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
D8LTD3_ECTSI1.630e-18181.95Glutamyl tRNA amidotransferase, subunit A, n-termi... [more]
A0A7S3Y278_HETAK6.510e-16855.62Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (... [more]
W7TRV8_9STRA1.990e-16754.55Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A0G4GTE2_VITBC1.290e-15652.12Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A0G4G7S4_9ALVE7.600e-15553.31Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A4D9D4K8_9STRA2.410e-15356.24Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A2W4J0K3_9PROT5.120e-15152.38Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]
A0A7C1PFJ9_9CHLR1.170e-15049.49Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13597contigH-elongata_contig13597:1720..7261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score534.3
Seed ortholog evalue6.5e-149
Seed eggNOG ortholog2880.D8LTD3
Preferred nameGATA
KEGG rclassRC00010
KEGG koko:K02433
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln)
EggNOG OGsCOG0154@1,KOG1211@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionglutamyl tRNA amidotransferase, subunit A, n-terminal region
Ec32 orthologEc-02_005910.1
Exons12
Model size2112
Cds size1560
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13597.2535.1prot_H-elongata_contig13597.2535.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13597 1723..6712 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929806.7247725-UTR-H-elongata_contig13597:1719..17221622929806.7247725-UTR-H-elongata_contig13597:1719..1722Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13597 1720..1722 +
1691679164.7883964-UTR-H-elongata_contig13597:1719..17221691679164.7883964-UTR-H-elongata_contig13597:1719..1722Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13597 1720..1722 +
1622929806.9414427-UTR-H-elongata_contig13597:6712..72611622929806.9414427-UTR-H-elongata_contig13597:6712..7261Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13597 6713..7261 +
1691679164.90465-UTR-H-elongata_contig13597:6712..72611691679164.90465-UTR-H-elongata_contig13597:6712..7261Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13597 6713..7261 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929806.7413695-CDS-H-elongata_contig13597:1722..19121622929806.7413695-CDS-H-elongata_contig13597:1722..1912Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 1723..1912 +
1691679164.8024778-CDS-H-elongata_contig13597:1722..19121691679164.8024778-CDS-H-elongata_contig13597:1722..1912Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 1723..1912 +
1622929806.759559-CDS-H-elongata_contig13597:2345..25181622929806.759559-CDS-H-elongata_contig13597:2345..2518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 2346..2518 +
1691679164.8116086-CDS-H-elongata_contig13597:2345..25181691679164.8116086-CDS-H-elongata_contig13597:2345..2518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 2346..2518 +
1622929806.773285-CDS-H-elongata_contig13597:2823..29351622929806.773285-CDS-H-elongata_contig13597:2823..2935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 2824..2935 +
1691679164.820922-CDS-H-elongata_contig13597:2823..29351691679164.820922-CDS-H-elongata_contig13597:2823..2935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 2824..2935 +
1622929806.8021564-CDS-H-elongata_contig13597:3500..36241622929806.8021564-CDS-H-elongata_contig13597:3500..3624Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 3501..3624 +
1691679164.8302312-CDS-H-elongata_contig13597:3500..36241691679164.8302312-CDS-H-elongata_contig13597:3500..3624Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 3501..3624 +
1622929806.8136437-CDS-H-elongata_contig13597:3795..39701622929806.8136437-CDS-H-elongata_contig13597:3795..3970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 3796..3970 +
1691679164.838548-CDS-H-elongata_contig13597:3795..39701691679164.838548-CDS-H-elongata_contig13597:3795..3970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 3796..3970 +
1622929806.8292072-CDS-H-elongata_contig13597:4179..42211622929806.8292072-CDS-H-elongata_contig13597:4179..4221Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 4180..4221 +
1691679164.8478093-CDS-H-elongata_contig13597:4179..42211691679164.8478093-CDS-H-elongata_contig13597:4179..4221Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 4180..4221 +
1622929806.8543024-CDS-H-elongata_contig13597:4589..46641622929806.8543024-CDS-H-elongata_contig13597:4589..4664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 4590..4664 +
1691679164.8566287-CDS-H-elongata_contig13597:4589..46641691679164.8566287-CDS-H-elongata_contig13597:4589..4664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 4590..4664 +
1622929806.8706026-CDS-H-elongata_contig13597:4896..50301622929806.8706026-CDS-H-elongata_contig13597:4896..5030Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 4897..5030 +
1691679164.866982-CDS-H-elongata_contig13597:4896..50301691679164.866982-CDS-H-elongata_contig13597:4896..5030Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 4897..5030 +
1622929806.885607-CDS-H-elongata_contig13597:5478..55511622929806.885607-CDS-H-elongata_contig13597:5478..5551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 5479..5551 +
1691679164.8747525-CDS-H-elongata_contig13597:5478..55511691679164.8747525-CDS-H-elongata_contig13597:5478..5551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 5479..5551 +
1622929806.900348-CDS-H-elongata_contig13597:5847..60141622929806.900348-CDS-H-elongata_contig13597:5847..6014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 5848..6014 +
1691679164.8822618-CDS-H-elongata_contig13597:5847..60141691679164.8822618-CDS-H-elongata_contig13597:5847..6014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 5848..6014 +
1622929806.9130366-CDS-H-elongata_contig13597:6141..62841622929806.9130366-CDS-H-elongata_contig13597:6141..6284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 6142..6284 +
1691679164.889788-CDS-H-elongata_contig13597:6141..62841691679164.889788-CDS-H-elongata_contig13597:6141..6284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 6142..6284 +
1622929806.9233232-CDS-H-elongata_contig13597:6560..67121622929806.9233232-CDS-H-elongata_contig13597:6560..6712Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 6561..6712 +
1691679164.8972511-CDS-H-elongata_contig13597:6560..67121691679164.8972511-CDS-H-elongata_contig13597:6560..6712Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13597 6561..6712 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13597.2535.1

>prot_H-elongata_contig13597.2535.1 ID=prot_H-elongata_contig13597.2535.1|Name=mRNA_H-elongata_contig13597.2535.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=520bp
MAMSSSLLGAAEAVRSGHVSSEQLVIQALKRLDQTEGEIGAFLNVQGRAA
VDAARGIDHKARTQGCRETLALPLVGVPLAVKDNLCTKGVPTTAASRILE
GYRPSYDATVVSKLKQAGGIVLGKTNMDEYAMGSTTETSAYQITRNPRNT
EHAPGGSSGGSAAAVASGVVTGALGTDTGGSVRQPASWCGVVGLKPTYGR
LSRRGLIAYASSTDCVGPIASTVIDAAALLGVVAGEDRAGDSTGLQEAVP
DYVTMLKEAEASGGSRPLEGVKMGLIREALVQRVQPDVAAAVKEAINTMA
SLGAEVNEVSLPSLPQQCAAYYVNALSEASANLARFDGIRYGQRNPEAMS
AKEAMLRSRHDGFGDEVKQRVILGTFALSAGYADKYYKRAQDIRAGLSHD
LARVFERLDVLICPTAPTTAYRLGEVVEKGVESYADDIFTAPASLAGLPA
LSVPCGRDRTGLPIGLQVMGKSLSEDVLLRVGAAYEAATDWHRIFGPGLS
VSSPQPATKAVASSLPSTS*
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mRNA from alignment at H-elongata_contig13597:1720..7261+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13597.2535.1 ID=mRNA_H-elongata_contig13597.2535.1|Name=mRNA_H-elongata_contig13597.2535.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5542bp|location=Sequence derived from alignment at H-elongata_contig13597:1720..7261+ (Himanthalia elongata Himel1 dioecious)
TCCATGGCGATGTCGTCTTCTCTTCTGGGGGCCGCGGAAGCTGTGCGATC GGGGCATGTTTCTTCCGAACAACTCGTCATCCAGGCGTTGAAGAGACTCG ATCAAACCGAAGGAGAAATCGGGGCGTTCTTGAACGTTCAGGGTCGTGCT GCAGTTGACGCCGCGAGAGGGATCGACCATAAGGCACGAACACGTAATGC GGCTAACCGCTAACCTCGCGACTTGTAGACCTCCGAATCGTCTAAGGTGA ACGCGCGGACGCACACACACACACACACACAGACATATACAAAAGGCACG ATTACAGGAGATAAACTGATGCAGCAGAAGGGGGAAAGACTCGTGGAACG GTGTAACGCTGAAGACCGCTGGCTCTGGCAGTGCACCGGTTCATACTTGT ACGAGACACATTCCGTCATCACTAGCGTTGCTGAGCGAATCACCCGCAGC CCCAGACCTCGCGTTCGCCCCCTGGTTGCGCCATCCACCGCTCGCATGTA GGGTCTAGGACCACTGCACTCCCCGTTGTATGTACAATAATTTGATCAAA ACACGAAAGCGGCGCGGTGGCCTTCGACCCCACAAGGCGATGTTTCTTTG CTGATTGCGACCAGACCAGATTCAAGAGGGGTGCAGAGAAACGCTCGCGC TGCCTCTCGTCGGAGTGCCCTTAGCGGTGAAGGATAACCTGTGCACTAAG GGAGTCCCCACCACGGCCGCAAGCCGGATACTGGAGGGTTACCGACCTTC CTACGACGCCACGGTCGTTTCCAAGCTTAAGCAAGCCGGGGGGATCGTGG TATGCATCATAGAAGCGCCCGGCGAGGATTCTAGACCCCCTAATAATAGC TATTTTTGTATCAAAACGTTAGCTGCGCTGTGTGAAGCACCATATCTATG CAACCAAAGGGAGAAGGCAACCGATCGATGTGAAGGCGTAGCGCGCTTTC CGACGTTTTGTCTCGTGGTGTAGAAGCTCTCAAGCTATTTCAATCCACGC TGATCCGGTAGCTCAGATGATCTTGTGTGCTGTGCGGTACTTGTGGCATA CTATGTCTTGTCTTCAGTGACTGACAATCATTACTGTTGTTGCGCGGAAC GCAGCTTGGCAAAACGAACATGGATGAGTATGCAATGGGGTCCACGACGG AGACATCTGCCTATCAGATCACGAGGAATCCCAGGAACACCGAACACGCG CCCGGAGGGTCCTCCGGTTTGTACTTGTCCAAGCGTATCCGCAGTCTCCG TTATTGCACCGCGTTGCAGCATGGAGGACCTCTAAAAACGCACCCAATGG AGGGGGGAAACATCCCCGGATTTTGTTCTAACTGTGGGAAAAAATTAGTC ATCTATTCAACGCTGCATTGTTGCCTGAGAATGCAATTTTCGCGGTAGGT AGAGAGGAAGGCTATTAGGGGGGGGGTGGGGAGGCATTCTCAGGAGCCCC TTTTACATTCCATAATTACTTTGAATTTGTTCCTTTTCGGATGATATCGA AGGGCTGAGCGGTACCCCATCATGCAAGTGGCGCAAGTCATAGAACGTGC GAAGTGATTGACCCTTTCACGCCAAAGTCAAGCGGATACCCTGCGGCGGG TCAGTACGCGCGGGTCATGGCCGCAGTCGCAGTCGCACAAGTCCCGCAGG TAGAAGGGGGAAGACCTGCGAAGGCAGGGTCCAGCAGTGCGGAGCTGTTT CGCATGGGTCGGGGCCATGGTTCTAGCACCCGGGCAAAGATCGTTCTGTG CGTGTGCTATCCATGCCTTGTGCACGCTCAGGGGGCTCGGCTGCGGCAGT GGCATCGGGCGTCGTGACGGGTGCTCTTGGTACTGACACGGGGGGTTCTG TGCGGCAGCCGGCATCTTGGTGCGGTGTAGTGGGGCTCAAACCAACGTAC GGACGGTGGGTGAGCACGGAAGCGGCGGAGGAGGCGGGCGGTTTTATCGT TTGTAGCAAGCAGTCGGGAGTTGGATCCGCCTTAGACGTGCTAGTCACCT CGTTTGAGCTGTCATGCACGTTACACCTGACCCCCATCCCCTCTTTCGAT ACCCGGTCTCGTTTCCGCTGTGAAAGGCTAAGCCGACGCGGGCTGATTGC GTACGCGTCCTCTACAGACTGCGTAGGCCCTATTGCTTCCACGGTGATCG ACGCTGCCGCATTGCTGGGCGTAGTGGCGGGAGAGGATCGCGCGGGTGAC TCGACGGGGCTGCAGGAAGCGGTGCCGGACTACGTGACGATGTTGAAGGA GGTGCGCTTCGAGGTTTTCGGCATGCGCGCAGATTGATCGCGTGGGCAAA GGCTTAGCCCCGGGTTCGAACATAAACGGTCCGTTTAAATATGAAGTACA CTCGCTCCAATGTGGCTTGCTAAATTCCAAGTACTTAAGACTGGCTTGAT GGTTCACTCTGAGTACTGGATGCCGAACCCCGCTTTGATACCCTGGTACG GCGTTTGCAGGCGGAAGCCTCTGGGGGCTCGCGGCCGCTCGAAGGGGTCA AGGTCTGTGCCTCGGAGGGTCAGGAATCAGCGCACATCGAGCGAACTCCC CGAACTTAAGCTCCGTGCAGCATATTACCATTAGTAAAACGCGTCTGTGG CCTGGGGACGAGTGTTCGTGAGAGCCGAGACGCATGCATCACCGGGGGCT TTGGCCTCTTGAACCCGGCGGAAGTGCGGTTACTTGTTCGTCTTCGTTGT CGAAGGCGCGGGAGGGTGCTAAATGCTTGTTCCGTCGTCGATCTTGTACA ATCTCCCACCATTTTCCCACTTTTCCCCACATACCTTTCGCCAGAGTCCC GACCCATCTTACCCCCCGATACCTCCAATCCGTTCGTAACTCGGTTTGTG CGCCTTTCTCTTCGCTGCAGATGGGATTGATCCGCGAGGCCCTCGTGCAG AGGGTGCAACCGGACGTTGCTGCAGCCGTCAAGGAGGCCATCAACGTGAG GACCACCCAACTTCCCTTGGACGGCGTAACCGCAGCCTCTCTTTCATCTC TCAAGGGTTTATAACCAACGACCTTTCCGAATTCGTTGTCATCGAAATAA AGTTGAGGTATTTCATCGCATGATGGCGGTTGTTATATTTTATTGCCGCA TTGCCTTGTTCTGTCGTTCGGCACACATCTACCTCCTAACCAGGCTCCGT AACGTGCATTTTGCGTCTCATGCACAGACGATGGCTTCTCTCGGGGCGGA GGTCAACGAAGTGTCTCTCCCGTCACTTCCGCAGCAATGCGCGGCGTATT ACGTCAACGCTCTCTCAGAGGCTTCGGCGAATCTGGCCCGCTTCGACGGG ATACGTTATGGGTGAGTGCGAAAGCAATGCCATTGATCGATTGGAGTACG TAAGAGGCACGGAGTAGCTCGCACCCCAATGAAGATTTTGCCGGGTGAGT TATGGGGTTGTCTGGTACGGTTGGCATCATTTTGCACCATTAGCACAGTT TCGGTGGTTTGTACCTAAGGCGGTTAGTGCTCTTTCCTTCCTCCCGGCGG GGGCGGGATGAAAGTTGGGCGAATCACGTGCGAGGGCAAGGGCAAAACAA AACACACACACACACACACACACACACACACACACACACACACACACACA CACACTTAACTTTTTACAACGCTGATTTGAATTTAATGCGTCATGGGTCA ACATCCCGCGGAGACATTTAGGCCTGCATTAAACGTAAAGCGGTCGCCAA AATAGACCTGCTTTGTGTTTTGCTTTGTTATGTTTATTTTGTATGTATGC ATGCGGCAGGCAAAGAAATCCCGAGGCTATGTCAGCGAAGGAAGCCATGC TCAGGAGCAGACACGATGGCTTCGGGGACGAGGTGAAATTCGAAAAGCGC GTTCAGAAATCCTGAAAAGGCGTTAGTGCACGACGAATACCACCAAGTCA GCGTGCGCCATCACGCATTGACACCAAGTCGACTTGGCATTTCCGACAAA TCTGCTTTTTTGCAATTTGCCTCACACTACCGTCGGCAGGTGCCTCGGGG CATATTGGCCAAGCCTCCACTTTCATCCCTTGCATCTGGTGGTAGACTCT GGGTTAATATGATCCAAGCTACTGACCTGCTTCAGCTGTCGTTTCGGCGT TTCTCGGGGTTTCCTTAACCACACTCAGGTAAAACAGCGAGTCATTCTAG GAACGTTTGCCCTCTCTGCTGGCTACGCGGACAAGTACTACAAGCGGGCT CAGGATATTCGAGCGGGGCTGTCTCACGACTTGGCGAGGGTGTTCGAGCG GCTTGACGTGCTGATTTGTCCCACCGCCCCCACCACAGCTTACCGGTGAG CAAGCGTAGGGCGCCGTCGCTATCCGCTCCTCCATGATTTTCTAATATTA CTTGCGTGACGTCACATGAGCGCACCATGAATCGTCTCACGCTATTCTTT CGCGCCGGCTTCGAGCAACCAGGTTGGGCGAGGTGGTAGAGAAAGGGGTA GAGAGTTATGCCGACGATATCTTTACGGCCCCGGCGTCGCTCGCTGGGCT ACCGGCGTTGAGCGTCCCGTGCGGACGAGACCGGACAGGCCTGCCGATCG GCTTGCAAGTTATGGGTGAGCTGCATCTCGCTCTGCCCCTGGATGCGCCG TTTGAACAAGGTGCTTGTCGATCGGGTTGATGATGTGATGTCCGTCGAGC CCATTCCATACGCATCTCTAGTTTAGATCCAGTTCAACGCGCAGCACCGC TCGAACCCGTGAGCTCCATACGTCGACTGCGTCGATCGGTGTTGCTGTGA TTTCGCCCAGATTCACTCCGCGCTGCTTCGAGTTCGAACAAGAGGTCCAT AGAGTACCCCCCCTCCTCCCCACTCCGCCCTCATCTCTCAGGTAAATCAC TCTCGGAGGATGTTCTTTTGAGGGTTGGGGCTGCGTACGAGGCTGCTACA GACTGGCATCGCATATTCGGGCCTGGGTTATCTGTCAGCTCTCCTCAACC AGCGACGAAGGCGGTGGCTTCGTCTTTACCTAGCACATCATAGTCCCGTA GATGTCATCAGTTTGTGGCAGCACCCCTAGGCACTGGATATGAATGTTCC CTCTCGAATATGTAATATATCCAGTATTTCCCAAGACCTACGACATTATT AATAGCCGACGTAGAAAGTAGGCGGCAAGGGGGAAAACGCTGCGGATGCT AGGGAAGATGGCGGGGTACAACGGTAGCAGCCTGTACCCGTTGTCGTGTG GTCAGTGCGGGCAGTGTTCACCGTTAATCGCCTTTCCTGAGATGTGTCGT GTCCGTGGTACGTCTTCGAACAACGTCGTTACTCGGCCTCGGAGAAAGTT GAGAGGAAGGGAGGAATTTGACCTCACCGGAATCTGCTGTACTGTACCGT GTTTCTCTCTACACAGTTTGCCGGAGCACAGCATAAGGATTGCATTATCT CGTTCGAACCTATGCTATATTCTGAAAAACTTGTGTTGACGTCCTTACCT CGCTTAGCCTTTTCTCCCATGTTTGTTCACCATTACCTTGGTAGACTCCC GAGAGATAAAATGTGGACCTCACGCGTTAAATTTCGGCCGGC
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Coding sequence (CDS) from alignment at H-elongata_contig13597:1720..7261+

>mRNA_H-elongata_contig13597.2535.1 ID=mRNA_H-elongata_contig13597.2535.1|Name=mRNA_H-elongata_contig13597.2535.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3120bp|location=Sequence derived from alignment at H-elongata_contig13597:1720..7261+ (Himanthalia elongata Himel1 dioecious)
ATGGCGATGTCGTCTTCTCTTCTGGGGGCCGCGGAAGCTGTGCGATCGGG
GCATGTTTCTTCCGAACAACTCGTCATCCAGGCGTTGAAGAGACTCGATC
AAACCGAAGGAGAAATCGGGGCGTTCTTGAACGTTCAGGGTCGTGCTGCA
GTTGACGCCGCGAGAGGGATCGACCATAAGGCACGAACACATGGCGATGT
CGTCTTCTCTTCTGGGGGCCGCGGAAGCTGTGCGATCGGGGCATGTTTCT
TCCGAACAACTCGTCATCCAGGCGTTGAAGAGACTCGATCAAACCGAAGG
AGAAATCGGGGCGTTCTTGAACGTTCAGGGTCGTGCTGCAGTTGACGCCG
CGAGAGGGATCGACCATAAGGCACGAACACAGGGGTGCAGAGAAACGCTC
GCGCTGCCTCTCGTCGGAGTGCCCTTAGCGGTGAAGGATAACCTGTGCAC
TAAGGGAGTCCCCACCACGGCCGCAAGCCGGATACTGGAGGGTTACCGAC
CTTCCTACGACGCCACGGTCGTTTCCAAGCTTAAGCAAGCCGGGGGGATC
GTGAGGGGTGCAGAGAAACGCTCGCGCTGCCTCTCGTCGGAGTGCCCTTA
GCGGTGAAGGATAACCTGTGCACTAAGGGAGTCCCCACCACGGCCGCAAG
CCGGATACTGGAGGGTTACCGACCTTCCTACGACGCCACGGTCGTTTCCA
AGCTTAAGCAAGCCGGGGGGATCGTGCTTGGCAAAACGAACATGGATGAG
TATGCAATGGGGTCCACGACGGAGACATCTGCCTATCAGATCACGAGGAA
TCCCAGGAACACCGAACACGCGCCCGGAGGGTCCTCCGCTTGGCAAAACG
AACATGGATGAGTATGCAATGGGGTCCACGACGGAGACATCTGCCTATCA
GATCACGAGGAATCCCAGGAACACCGAACACGCGCCCGGAGGGTCCTCCG
GGGGCTCGGCTGCGGCAGTGGCATCGGGCGTCGTGACGGGTGCTCTTGGT
ACTGACACGGGGGGTTCTGTGCGGCAGCCGGCATCTTGGTGCGGTGTAGT
GGGGCTCAAACCAACGTACGGACGGGGGCTCGGCTGCGGCAGTGGCATCG
GGCGTCGTGACGGGTGCTCTTGGTACTGACACGGGGGGTTCTGTGCGGCA
GCCGGCATCTTGGTGCGGTGTAGTGGGGCTCAAACCAACGTACGGACGGC
TAAGCCGACGCGGGCTGATTGCGTACGCGTCCTCTACAGACTGCGTAGGC
CCTATTGCTTCCACGGTGATCGACGCTGCCGCATTGCTGGGCGTAGTGGC
GGGAGAGGATCGCGCGGGTGACTCGACGGGGCTGCAGGAAGCGGTGCCGG
ACTACGTGACGATGTTGAAGGAGGCTAAGCCGACGCGGGCTGATTGCGTA
CGCGTCCTCTACAGACTGCGTAGGCCCTATTGCTTCCACGGTGATCGACG
CTGCCGCATTGCTGGGCGTAGTGGCGGGAGAGGATCGCGCGGGTGACTCG
ACGGGGCTGCAGGAAGCGGTGCCGGACTACGTGACGATGTTGAAGGAGGC
GGAAGCCTCTGGGGGCTCGCGGCCGCTCGAAGGGGTCAAGGCGGAAGCCT
CTGGGGGCTCGCGGCCGCTCGAAGGGGTCAAGATGGGATTGATCCGCGAG
GCCCTCGTGCAGAGGGTGCAACCGGACGTTGCTGCAGCCGTCAAGGAGGC
CATCAACATGGGATTGATCCGCGAGGCCCTCGTGCAGAGGGTGCAACCGG
ACGTTGCTGCAGCCGTCAAGGAGGCCATCAACACGATGGCTTCTCTCGGG
GCGGAGGTCAACGAAGTGTCTCTCCCGTCACTTCCGCAGCAATGCGCGGC
GTATTACGTCAACGCTCTCTCAGAGGCTTCGGCGAATCTGGCCCGCTTCG
ACGGGATACGTTATGGACGATGGCTTCTCTCGGGGCGGAGGTCAACGAAG
TGTCTCTCCCGTCACTTCCGCAGCAATGCGCGGCGTATTACGTCAACGCT
CTCTCAGAGGCTTCGGCGAATCTGGCCCGCTTCGACGGGATACGTTATGG
GCAAAGAAATCCCGAGGCTATGTCAGCGAAGGAAGCCATGCTCAGGAGCA
GACACGATGGCTTCGGGGACGAGGCAAAGAAATCCCGAGGCTATGTCAGC
GAAGGAAGCCATGCTCAGGAGCAGACACGATGGCTTCGGGGACGAGGTAA
AACAGCGAGTCATTCTAGGAACGTTTGCCCTCTCTGCTGGCTACGCGGAC
AAGTACTACAAGCGGGCTCAGGATATTCGAGCGGGGCTGTCTCACGACTT
GGCGAGGGTGTTCGAGCGGCTTGACGTGCTGATTTGTCCCACCGCCCCCA
CCACAGCTTACCGGTAAAACAGCGAGTCATTCTAGGAACGTTTGCCCTCT
CTGCTGGCTACGCGGACAAGTACTACAAGCGGGCTCAGGATATTCGAGCG
GGGCTGTCTCACGACTTGGCGAGGGTGTTCGAGCGGCTTGACGTGCTGAT
TTGTCCCACCGCCCCCACCACAGCTTACCGGTTGGGCGAGGTGGTAGAGA
AAGGGGTAGAGAGTTATGCCGACGATATCTTTACGGCCCCGGCGTCGCTC
GCTGGGCTACCGGCGTTGAGCGTCCCGTGCGGACGAGACCGGACAGGCCT
GCCGATCGGCTTGCAAGTTATGGGTTGGGCGAGGTGGTAGAGAAAGGGGT
AGAGAGTTATGCCGACGATATCTTTACGGCCCCGGCGTCGCTCGCTGGGC
TACCGGCGTTGAGCGTCCCGTGCGGACGAGACCGGACAGGCCTGCCGATC
GGCTTGCAAGTTATGGGTAAATCACTCTCGGAGGATGTTCTTTTGAGGGT
TGGGGCTGCGTACGAGGCTGCTACAGACTGGCATCGCATATTCGGGCCTG
GGTTATCTGTCAGCTCTCCTCAACCAGCGACGAAGGCGGTGGCTTCGTCT
TTACCTAGCACATCATAGGTAAATCACTCTCGGAGGATGTTCTTTTGAGG
GTTGGGGCTGCGTACGAGGCTGCTACAGACTGGCATCGCATATTCGGGCC
TGGGTTATCTGTCAGCTCTCCTCAACCAGCGACGAAGGCGGTGGCTTCGT
CTTTACCTAGCACATCATAG
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