mRNA_H-elongata_contig13579.2527.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: D7FWK0_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK0_ECTSI) HSP 1 Score: 290 bits (742), Expect = 3.710e-93 Identity = 161/262 (61.45%), Postives = 181/262 (69.08%), Query Frame = 1
Query: 1 SRTWHWRNGFEIHYEHA------------------RCDGAP-PLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDGLCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQ--------------PTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGLFRFGAWYFDRMRDPRTVKSMLSAVYSNP 687
S WHWRNG+E+HYE A R +G+ PL+ LPGFGVGTFHF+RNMQELS+ DVYS+D LGQGKSWPTR PSR+DGLCY VDMWTEQV+ AFI +++GEPAYVAGNSLGG+I ANLAA +PRAVLGLAL+NATPFWAFR+ P+ D + R XXXXXXXXXXXX +G DWL WDGTLPAP GLFRFGAWYFDRMRDPRTVKSML AVYSNP
Sbjct: 46 SGVWHWRNGWEVHYERATSRRPAAGEREGEGGGQRRREGSTTPLLLLPGFGVGTFHFRRNMQELSETRDVYSIDLLGQGKSWPTRVPSREDGLCYSVDMWTEQVL-AFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPSANAALNGGDVTDPYPSTDLSATRD---IXXXXXXXXXXXXXXXXVPGSPATKGESPVEGRGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYSNP 303
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A6H5J6H3_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H3_9PHAE) HSP 1 Score: 294 bits (752), Expect = 3.820e-93 Identity = 157/262 (59.92%), Postives = 174/262 (66.41%), Query Frame = 1
Query: 1 SRTWHWRNGFEIHYEHARC-------------------DGAPPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDGLCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQ--------------PTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGLFRFGAWYFDRMRDPRTVKSMLSAVYSNP 687
S WHWRNG+EIHYE A PL+ LPGFGVGTFHF+RNMQELS+ DVYS+DFLGQG SWPTRAPSR+DGLCY VDMWT+QV+ AFI +++GEPAYVAGNSLGG+I ANLAA +PRAVLGLAL+NATPFWAFR+ P D + R S S XXXXXXX +GS DWL WDGTLPAP GLFRFGAWYFDRMRDPRTVKSML AVY NP
Sbjct: 176 SGVWHWRNGWEIHYERATSRRPAAGDRKRXXXXXXXXXXSTTPLLLLPGFGVGTFHFRRNMQELSETRDVYSIDFLGQGNSWPTRAPSREDGLCYSVDMWTQQVL-AFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPSANAASNGGDVTDPYPPTDLSATRDV---STGSATXXXXXXXSEIVPGNPATKGESPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYHNP 433
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A7S2UZQ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ6_9STRA) HSP 1 Score: 170 bits (430), Expect = 5.870e-47 Identity = 92/228 (40.35%), Postives = 126/228 (55.26%), Query Frame = 1
Query: 10 WHWRNGFEIHYEHARC----DGAPPLVFLPGFGVGTFHFKRNMQELS-KAHDVYSLDFLGQGKSWPTRAPSRQDGLCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQPTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGLFRFGAWYFDRMRDPRTVKSMLSAVY 678
W W+N ++IH+ D ++FLPGFGVGTFHF RN+ +L+ + H +++D LGQG+SWP S ++GL Y VDMWT+Q++ FI++++ P + GNSLGG IG +AAK P V L LLNATPFWAF + ++ GW L WDG LPAP L++FG++YFD +R +TVKSML VY
Sbjct: 93 WDWKNDWKIHFVRKSSSVGQDKNINILFLPGFGVGTFHFDRNLPDLADQGHTTWAIDLLGQGQSWPQTDES-EEGLTYSVDMWTDQIID-FIDEVIQSPVNLCGNSLGGLIGTIVAAKRPDLVQSLTLLNATPFWAFLPVKGSMP------GW---------------------------------VEKLLPWDGELPAPGPLYKFGSFYFDNLRSSKTVKSMLGLVY 279
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A7J7PRQ6_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PRQ6_9CHLO) HSP 1 Score: 172 bits (435), Expect = 1.850e-45 Identity = 91/226 (40.27%), Postives = 124/226 (54.87%), Query Frame = 1
Query: 16 WRNGFEIHYEHARCDGAPPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDG-LCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQPTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGL-FRFGAWYFDRMRDPRTVKSMLSAVYSNP 687
W+ G ++ Y A G PPL+ + GFGVG +HF RN+ EL++ H VY++D LGQG+SWPT+ +Q G LCY D WTEQ+ H FIE+ +G+P Y+AGNSLGGF+G NLAA+HP AV GL LLNATPFW+ R W T+P PK + +++DR+R+P T++S+L VY+ P
Sbjct: 83 WKWGSKVSYVRAGRTG-PPLLLVHGFGVGAYHFDRNIPELARNHQVYAIDLLGQGRSWPTQVQCQQSGPLCYSADTWTEQLFH-FIEEKIGQPVYIAGNSLGGFLGCNLAARHPDAVKGLVLLNATPFWSSRPPAGQEGPL------------------------------------------WRLMPSTVPVPKVIKSTIERYWWDRIRNPETIRSLLQLVYARP 264
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A9S5N8_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S5N8_PHYPA) HSP 1 Score: 161 bits (408), Expect = 1.050e-44 Identity = 90/256 (35.16%), Postives = 128/256 (50.00%), Query Frame = 1
Query: 1 SRTWHWRNGFEIHYEHARCD---GAPPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQD----------------------GLCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQPTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAP---KGLFRFGAWYFDRMRDPRTVKSMLSAVYSN 684
S W WR+ + IHYE A AP ++ LPGFGVG+FH+ + +++L + + V+++DFLGQGKSWP+ P+ ++ GL Y VD W +QV HAFIE+++G P Y+ GNSLGG++G+ AA +P V G+ LLNATPFWAF S W G LP P K + RF ++D +R+P T+++ML AVY+N
Sbjct: 3 SHIWEWRHRWNIHYECAGTSLNTNAPAMLLLPGFGVGSFHYHQQLRDLGQEYRVWAIDFLGQGKSWPSHDPAPEEAEEVVEEIRHWSLGKNPEPWAEGLVYSVDTWRDQV-HAFIEKVIGGPVYIVGNSLGGYVGSYFAATNPELVKGVTLLNATPFWAFTPNSRRYPLL----------------------------------------SKLTPWGGLLPVPIFAKAIIRF---WWDLLRNPSTIRNMLGAVYAN 214
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A383V9I0_TETOB (AB hydrolase-1 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V9I0_TETOB) HSP 1 Score: 160 bits (405), Expect = 2.700e-43 Identity = 76/132 (57.58%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 16 WRNGFEIHYEHARCDGAPPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDG-LCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFR 408
W+ G +I Y A G PPL+ + GFGVG +HF RN+ EL++ H VY++D LGQG+SWPT+ + G LCY D WTEQ+ H FIE+ +G+P Y+AGNSLGGF+ NLAAKHP AV GL LLNATPFW+ R
Sbjct: 82 WKWGSKISYVRAGRTG-PPLLLVHGFGVGAYHFDRNIPELARNHKVYAIDLLGQGQSWPTQVQCQASGPLCYSADTWTEQLFH-FIEEKIGQPVYIAGNSLGGFLACNLAAKHPDAVKGLVLLNATPFWSSR 211
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A1Y1I9I5_KLENI (Putative alpha/beta hydrolase fold containing-protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9I5_KLENI) HSP 1 Score: 152 bits (385), Expect = 1.370e-40 Identity = 85/244 (34.84%), Postives = 125/244 (51.23%), Query Frame = 1
Query: 7 TWHWRNGFEIHYEHARCDGAPPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPS-RQDG-----------------LCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQPTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGLFRFGAWYFDRMRDPRTVKSMLSAVYSN 684
TW WR+ + ++YE A G PPLVFLPGFGVG FHF+ +++L H V+ +D LGQG SWP+ P+ DG L Y VD WT Q+ AF+ +V EP Y+ GNSLGG++ +LAA+ P V G+ L+NATPFWAF + + K ++ + R + W G +P P+ + ++D +R+P T++++L+ VY N
Sbjct: 47 TWEWRHRWHVYYETAGTQG-PPLVFLPGFGVGCFHFRDQLRDLGSDHRVWVMDLLGQGNSWPSHDPAPHADGDFKYWGFGPAAEEWAGDLIYSVDTWTSQI-EAFLATVVKEPVYLLGNSLGGYLAVSLAARRPDLVKGVCLVNATPFWAF------IPSPKSKNWFSRQIGR-------------------------------VIWAGAVPVPRWARWASSRWWDALRNPGTIRALLAQVYCN 251
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A150GDP3_GONPE (AB hydrolase-1 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDP3_GONPE) HSP 1 Score: 150 bits (379), Expect = 6.110e-40 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 4 RTWHWRNGFEIHYEHARCDGAPPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDGLCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQ 411
R W W+ I Y G PP++F GFGV +HF RN ++LS+ H V+++D LGQG+SWP GL Y VD WT Q+ F+EQ VGEPAYVAGNSLGG++ NLAA+ P V GL LLNATPFWAFR+
Sbjct: 19 RYWEWQYNSRICYRQVGETG-PPILFCHGFGVAGWHFHRNWEDLSRDHRVFTVDLLGQGRSWPQHPVPPDAGLYYSVDTWTTQL-EQFLEQCVGEPAYVAGNSLGGYLAVNLAARRPDLVKGLVLLNATPFWAFRR 152
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A8J5XDH3_DIALT (AB hydrolase-1 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDH3_DIALT) HSP 1 Score: 146 bits (368), Expect = 8.200e-39 Identity = 88/252 (34.92%), Postives = 116/252 (46.03%), Query Frame = 1
Query: 10 WHWRNGFEIHYEHARCDGAPP--------------------------LVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDGLCYGVDMWTEQVVHAFIEQIV-GEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQPTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGLFRFGAWYFDRMRDPRTVKSMLSAVYSN 684
W R G +HY A APP LV LPGFGVGTFHF +++L + Y+LD+LGQG+SWP + + GL Y D+W EQ+ AF++ ++ G PA + GNSLGG+I LA K P V GL LLN TP W+F V A + WD TLPAP+ F G+ +F +RDPRT+ +ML AVY++
Sbjct: 37 WPGRPGLRVHYTRAAPQVAPPPHRVSTSESPSSSAAPRSASGGDASPLVCLPGFGVGTFHFTAQLEQLGIEREAYALDWLGQGESWPVDDEAER-GLRYDADLWREQL-EAFLDSVLDGRPAILVGNSLGGYIAVQLALKRPELVRGLVLLNPTPIWSFAPPARDVGALRP-----------------------------------------FGWDATLPAPRVPFLIGSTWFHTLRDPRTIATMLGAVYAD 245
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Match: A0A804K7J2_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804K7J2_MUSAM) HSP 1 Score: 149 bits (377), Expect = 1.130e-38 Identity = 81/251 (32.27%), Postives = 120/251 (47.81%), Query Frame = 1
Query: 10 WHWRNGFEIHYEHARCDG--APPLVFLPGFGVGTFHFKRNMQELSKAHDVYSLDFLGQGKSWPTRAPSRQDG------------------------LCYGVDMWTEQVVHAFIEQIVGEPAYVAGNSLGGFIGANLAAKHPRAVLGLALLNATPFWAFRQTQPTVDAAKHRHGWHRSNASXXXXXXXXXXXXXXXXXXXXXXXXXDGSSDWLRWDGTLPAPKGLFRFGAWYFDRMRDPRTVKSMLSAVYSN 684
W W+ +HYE + AP ++FLPGFGVG+FH+++ +++L + + V++LDFLGQGKS P+ P+ D L Y +D+W EQV H F+EQ++GEP YV GNSLGGF+ AA +P+ V G+ LLNATPFW F S +L W GT P P + R ++++ DP +++ +L VY++
Sbjct: 135 WEWKPKISVHYEKSGSQNVDAPAVLFLPGFGVGSFHYEKQLEDLGRDYKVWALDFLGQGKSLPSEDPAPVDNREGDSEDNDVLWGFGEEPKPWARELVYSIDLWREQVQH-FVEQVIGEPVYVVGNSLGGFVALYFAACNPQLVRGVTLLNATPFWGFLPNPVRSPRL----------------------------------------SKFLSWSGTFPLPSNVRRLTQLVWEKISDPSSIQEVLKQVYAD 344 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13579.2527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13579.2527.1 >prot_H-elongata_contig13579.2527.1 ID=prot_H-elongata_contig13579.2527.1|Name=mRNA_H-elongata_contig13579.2527.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp SRTWHWRNGFEIHYEHARCDGAPPLVFLPGFGVGTFHFKRNMQELSKAHDback to top mRNA from alignment at H-elongata_contig13579:63..2853- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13579.2527.1 ID=mRNA_H-elongata_contig13579.2527.1|Name=mRNA_H-elongata_contig13579.2527.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2791bp|location=Sequence derived from alignment at H-elongata_contig13579:63..2853- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13579:63..2853- >mRNA_H-elongata_contig13579.2527.1 ID=mRNA_H-elongata_contig13579.2527.1|Name=mRNA_H-elongata_contig13579.2527.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig13579:63..2853- (Himanthalia elongata Himel1 dioecious)back to top |