mRNA_H-elongata_contig13555.2517.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: D7FM52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM52_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 1.240e-146 Identity = 247/318 (77.67%), Postives = 274/318 (86.16%), Query Frame = 1
Query: 4 GGRPRAALASTRAN----SGAPPRRSQRVVRMSTEQGEEKEVETLGAEITTDDKLVYDRRTGRFYEKKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPKI 945
GGRPRAALA RA + AP RRS +VRM+T+Q +E + DDKL+YD R+GRFYEKK+EEVCREEYCAIDE+TG+PMLLTTGEKERIF DAIQSFYYNQRQ+L DDDFDKLKEDLAWEGS VVLMNRDEQLFMSAMAAY RG+ XXXXXXXXXXXXXXXXXX VAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGL LG SW+I++P+R LNPL LLLLT PTI SK+FTDLCLYQDNGTVASGPCPSC A NR+FFGS+LGV+GNID++EFKC +C E+IKIRR+DLRARTLPK+
Sbjct: 30 GGRPRAALARGRAAITRATTAPSRRSAGLVRMATDQEKEGVATEEPKDELGDDKLIYDARSGRFYEKKLEEVCREEYCAIDETTGKPMLLTTGEKERIFTDAIQSFYYNQRQMLDDDDFDKLKEDLAWEGSPVVLMNRDEQLFMSAMAAYSRGDKIXXXXXXXXXXXXXXXXXXVVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLAFLGASWQIIEPIRYLNPLATLLLLTAPTIAASKKFTDLCLYQDNGTVASGPCPSCGAQNRVFFGSMLGVKGNIDDSEFKCDNCGEIIKIRRADLRARTLPKL 347
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A835YSN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN6_9STRA) HSP 1 Score: 319 bits (817), Expect = 7.500e-99 Identity = 178/265 (67.17%), Postives = 210/265 (79.25%), Query Frame = 1
Query: 148 DKLVYDRRTGRFYEKKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPK 942
DKL+YD RTGRFYEKKIEE+CR+EYCAIDESTGE +LLT EKERIF+D+IQSFYY+ RQVL DDDF+KLKEDL WEGS VV++NR E LF++AM+AY +G XXXXXXXXXXXXXXXXXXX VAVSTEPKCYIDTGICTVTFQED FR Y+P L LG +E+++PLR++NPL+ L+L T PT F +K FTD ++ +A GPCPSC A N +FFG++LGVEG +EA FKC +C E I IRR DLRART PK
Sbjct: 20 DKLIYDSRTGRFYEKKIEEICRDEYCAIDESTGEQVLLTLEEKERIFLDSIQSFYYSDRQVLADDDFEKLKEDLVWEGSPVVMLNRQETLFLNAMSAYLKGXXXXXXXXXXXXXXXXXXXXXKVAVSTEPKCYIDTGICTVTFQEDKFREATLYVPVGIPTLLFSLGALYELLEPLRSVNPLVTLVLATLPTYFFTKFFTDNVFATNDPKIAYGPCPSCGASNHVFFGNVLGVEGPGEEANFKCSNCKEEITIRRRDLRARTSPK 284
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A835Z693_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z693_9STRA) HSP 1 Score: 309 bits (792), Expect = 1.240e-94 Identity = 165/266 (62.03%), Postives = 192/266 (72.18%), Query Frame = 1
Query: 148 DKLVYDRRTGRFYEKKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPKI 945
D L+YD RTGRFYEKKIEE+CR+EYCAIDE+TGE +LLT EKERIF+DAIQSFYY+ RQ+L DDDF+KLKEDL WEGS VV++NR E +F+ AM Y +G XXXXXXXXXX VAVSTEPKCYIDTGICTVTFQED FRR Y P L LG +E+ +PLR++NPL+ L+L T PT +K FTD + VA GPCPSC A N +FFG++LGV G D AEFKC C E I IRR DLRART P +
Sbjct: 58 DTLIYDARTGRFYEKKIEEICRDEYCAIDETTGEQVLLTLQEKERIFLDAIQSFYYSDRQILEDDDFEKLKEDLIWEGSDVVMLNRQETVFLYAMQTYLKGEPFLTXXXXXXXXXXLRDAGSKVAVSTEPKCYIDTGICTVTFQEDKFRRATLYTPVGIPTLLFTLGALYEVFEPLRSVNPLVTLILATIPTWAFTKAFTDSVFITNEAKVAYGPCPSCGATNHVFFGNVLGVVGPGDTAEFKCSKCKEQITIRRRDLRARTAPSV 323
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A7S4N636_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N636_9STRA) HSP 1 Score: 242 bits (617), Expect = 4.360e-69 Identity = 146/264 (55.30%), Postives = 193/264 (73.11%), Query Frame = 1
Query: 160 YDRRTGRFYEKKIEEV-C--REEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPK 942
YD TGRFYE ++E+ C +EYCA+D+STG+ + LT EKERIF+D++QS+Y + RQ+L D +FD LKEDL+W GS VV +NR+E F++A+ AY XXXXXXXXXXXXXXXXXXXX+AVST+PKCYID+GIC VTFQ+D FR YLP IF + LG+ +E ++PL LNP++ L L P S +FTD ++ +N ++A GPCPSC A NR++FG ILGVEG + AE KCK+C VI++++ LRA +LPK
Sbjct: 76 YDEVTGRFYETGMDEIECIPDDEYCAVDKSTGKLVRLTVKEKERIFLDSLQSYYTSGRQILDDAEFDTLKEDLSWNGSPVVALNREETRFLNALQAYNXXXXXXXXXXXXXXXXXXXXXXXXIAVSTDPKCYIDSGICRVTFQKDNFRNNLLYLPLGAIFTVVWLGLGFEFIEPLIRLNPIVLLGLGAYPIYKYSIEFTDKFIFPNN-SIAYGPCPSCEAENRVYFGDILGVEGYNEVAEIKCKNCKAVIEVQQKTLRASSLPK 338
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A7S2CL01_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CL01_9STRA) HSP 1 Score: 231 bits (590), Expect = 4.260e-65 Identity = 137/264 (51.89%), Postives = 184/264 (69.70%), Query Frame = 1
Query: 154 LVYDRRTGRFYEKKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPKI 945
L+YD RTGRFYEK+I +CR+E+CAIDE+TG P++L+ EKE+IF++ +QS+YY+ R+VL D DFDKLKEDL WEGS V +++RDE F++AM AY XXXXXXXXXXXXXXXXXXXX VS EPKC IDTGIC+VT+ +D R+ +Y P +F L S+E+ PL+ +NPL+ L++ P IF ++ N +ASGPCP CN NR++FG +LG++G +EA KC +C + I R++LR T K
Sbjct: 73 LIYDSRTGRFYEKEIAALCRDEFCAIDETTGNPIVLSVDEKEKIFVECMQSYYYDGREVLNDADFDKLKEDLIWEGSPVAILSRDETKFLAAMGAYLXXXXXXXXXXXXXXXXXXXXXXXXXXVSKEPKCSIDTGICSVTWTKDKVRQAVSYSPVGVVFLLLWEVFSYELT-PLKYVNPLIGLIV-GSPLIFFGTILFAENIFYKNPLIASGPCPECNEENRVYFGGVLGIDGFDEEATMKCSNCKTPLTIARANLRVNTPSKF 334
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A448Z6R2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6R2_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.070e-64 Identity = 143/276 (51.81%), Postives = 185/276 (67.03%), Query Frame = 1
Query: 127 GAEITTDDK-LVYDRRTGRFYEKKIE-EVC--REEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPK 942
GA++T+ K L +D +TGRF+E I+ E C EE+C IDE TG + LT EKERIF+DA+QS+Y RQ+L+D+DFD LKEDL W GS VV++NR E +++AM A XXXXXXXXXXXXXXXXXXX AV TEPKCYID+G+C VT QED FR YLPA + LG+++E+++P +NP++ L + SK+ T+ ++ D +A GPCPSC NRI+FG ILGVEG DE KC +C V ++R LRA TLPK
Sbjct: 54 GAQVTSARKELKFDDKTGRFFETDIDLEECIPEEEFCTIDEDTGSKIRLTVAEKERIFLDALQSYYATGRQLLSDEDFDLLKEDLQWNGSDVVVVNRQETAYLAAMEAXXXXXXXXXXXXXXXXXXXXXXXXXKFAVDTEPKCYIDSGVCKVTLQEDKFRSNLLYLPAGLTLSVVWLGLAFELIEPFIRVNPIILFALGLPLIVDGSKKITEELIFTDK-LIAYGPCPSCEYENRIYFGDILGVEGFGDEGSVKCPNCKTVFTVQRKTLRASTLPK 328
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A6T5NR44_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NR44_HETAK) HSP 1 Score: 225 bits (574), Expect = 2.250e-63 Identity = 135/265 (50.94%), Postives = 178/265 (67.17%), Query Frame = 1
Query: 148 DKLVYDRRTGRFYEKKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPK 942
D L+YD RTGRFYEK IEEVCR+E+C IDE+TGE ++L+ EKERIF+D++Q++YY+ +VL DDDFD+LK DL WEGS + +NR+E LF++AM A XXXXXXXXXXXXXXXXXXXX AV+TEPKCY+DTG+C VTF +D R Y PA I +G ++E+ R++NP++ LL P I+ + + +A GPCPSC NRI+FG+ILGVEG D + C +C + I + L+ T K
Sbjct: 46 DGLIYDPRTGRFYEKSIEEVCRDEFCTIDETTGEQVVLSVKEKERIFLDSLQAYYYDGSKVLNDDDFDQLKADLVWEGSPLATLNREETLFLNAMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVATEPKCYVDTGVCKVTFVKDEARMATLYAPAFLIATFLWIGTAFEVFSFFRDINPIITLLA-GSPLIYAGTKVGTENFWLSEPLIAKGPCPSCGFENRIYFGTILGVEGVGDAGDVTCPNCKVKMNIEKRTLKVVTETK 309
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A7S1FNE7_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNE7_9STRA) HSP 1 Score: 226 bits (575), Expect = 3.230e-63 Identity = 134/263 (50.95%), Postives = 174/263 (66.16%), Query Frame = 1
Query: 154 LVYDRRTGRFYEKKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPK 942
L+YD +GRF+E + E + EEYCA+DE+TG+ + LT EKER+F+D++QS+Y++ RQ+L+DD+FD LKEDL W GS +V +NR E F+SAM AY + XXXXXXXXXXXX AVSTEPKC+IDTGICTVT QED FR YLP I L +S+EI+ LNP+ ++ P + TD ++ N +A GPCPSC A NR+FFG ILGV+G ++AE KC C + + RS LRA TLPK
Sbjct: 74 LMYDADSGRFFESEGECIPAEEYCAVDENTGKLIRLTIEEKERMFLDSLQSYYFSGRQLLSDDEFDLLKEDLQWSGSALVSLNRKEARFLSAMKAYNKXXXXXXXXXXXXXXXELKNENSKFAVSTEPKCFIDTGICTVTLQEDFFRSNLLYLPVLSILYFTWLVLSYEILH----LNPIFLTIIGAFPIYKGTLTITDQYVFT-NQKIAYGPCPSCEAENRVFFGDILGVQGFGEQAEVKCPQCKDKFTVLRSTLRASTLPK 331
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: A0A7S2I6A5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6A5_9STRA) HSP 1 Score: 226 bits (575), Expect = 3.970e-63 Identity = 144/280 (51.43%), Postives = 189/280 (67.50%), Query Frame = 1
Query: 154 LVYDRRTGRFYE-KKIEEVCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFLSKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPKI*RSESS*SSPFSLAG 990
+ YD TGRFYE + E + EE+C I + TGEP+ LT EKER+FMDA+QS+Y + +QV++DDDFD LKEDL+W GS++V M+R E +++A+ A XXXXXXXXXXXXXXXXXXX AVS EPKC I+TGICTVT +ED FR YLPA IF L LGI +E+++P LNP++ + L + ++ T+ ++ DN +A GPCP C A NR++FG+ILGVEG DEA KC +C E +++S LRA TLP + SSPF G
Sbjct: 65 IAYDESTGRFYEFDEGECIPDEEFCVISDDTGEPIRLTIEEKERMFMDALQSYYISGKQVMSDDDFDSLKEDLSWNGSKLVEMSRKEASYLAAVQAXXXXXXXXXXXXXXXXXXXXXXXXXQFAVSKEPKCLIETGICTVTLEEDRFRSNLLYLPAGSIFFLLWLGIGFELIEPWARLNPVILIALGLPLIVQGTETVTNNYIFPDN-KIAYGPCPKCGAQNRVYFGNILGVEGFGDEASVKCGNCKETFTVQKSTLRASTLP-----DDELSSPFFAEG 338
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Match: B7FRN6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRN6_PHATC) HSP 1 Score: 224 bits (571), Expect = 9.940e-63 Identity = 142/284 (50.00%), Postives = 192/284 (67.61%), Query Frame = 1
Query: 103 EEKEVETLGAEITTDDKLVYDRRTGRFYEKKIEE---VCREEYCAIDESTGEPMLLTTGEKERIFMDAIQSFYYNQRQVLTDDDFDKLKEDLAWEGSQVVLMNRDEQLFMSAMAAYGRGNNXXXXXXXXXXXXXXXXXXXXVAVSTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLGLLGISWEIVQPLRNLNPLLNLLLLTGPTIFL-SKQFTDLCLYQDNGTVASGPCPSCNAPNRIFFGSILGVEGNIDEAEFKCKSCSEVIKIRRSDLRARTLPK 942
EEKE E L + ++ +D GRF+E I + + EE+C D +G + LT EKERIF+DA+QS+Y + R++L+DD+FD LKEDL W GS +V+MNR E +++AM AY +G+ XXXXXXXXXXXXXXXXXXX AV TEPKCYIDTGIC VT QED FR YLPA I + +G +E+++P +NP++ L L+ P I+L ++ T+ +++ N +A GPCPSC A NR++FG+ILGVEG D A KC +C ++R+ LRA TLPK
Sbjct: 43 EEKEKEDLTLVPSARKQIAFDEAKGRFFETDISDADCIPDEEFCITDNDSGSMIRLTIEEKERIFLDALQSYYNSGRKMLSDDEFDLLKEDLTWNGSPMVVMNRKEAAYLNAMQAYLKGDPXXXXXXXXXXXXXXXXXXXKFAVQTEPKCYIDTGICKVTLQEDKFRSNLLYLPATVIGVVAWIGFGFEVLEPFIRINPVV-LTLMGTPLIYLGARTLTEEFIFE-NKFLAYGPCPSCQAENRVYFGNILGVEGFTDVANAKCPNCKTTFTVQRNTLRASTLPK 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13555.2517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13555.2517.1 >prot_H-elongata_contig13555.2517.1 ID=prot_H-elongata_contig13555.2517.1|Name=mRNA_H-elongata_contig13555.2517.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp MSTEQGEEKEVETLGAEITTDDKLVYDRRTGRFYEKKIEEVCREEYCAIDback to top mRNA from alignment at H-elongata_contig13555:1086..7239+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13555.2517.1 ID=mRNA_H-elongata_contig13555.2517.1|Name=mRNA_H-elongata_contig13555.2517.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6154bp|location=Sequence derived from alignment at H-elongata_contig13555:1086..7239+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13555:1086..7239+ >mRNA_H-elongata_contig13555.2517.1 ID=mRNA_H-elongata_contig13555.2517.1|Name=mRNA_H-elongata_contig13555.2517.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1728bp|location=Sequence derived from alignment at H-elongata_contig13555:1086..7239+ (Himanthalia elongata Himel1 dioecious)back to top |