mRNA_H-elongata_contig13552.2512.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 1.600e-11 Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPET 153
W R ++PH+ LARRVLAIPAT A SER+FSCAG IV K RN L P T
Sbjct: 227 WRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTT 276
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 4.130e-11 Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 22 NYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPET 153
++PH+ LARRVLAIPAT A SER+FSCAG IV K RN L P T
Sbjct: 153 DFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTT 196
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: R7TXQ1_CAPTE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TXQ1_CAPTE) HSP 1 Score: 59.7 bits (143), Expect = 9.990e-11 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 16 ERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPE 150
ERN+P + LA++ LAIPAT APSER+FS AG IV +R++L+PE
Sbjct: 3 ERNFPRIALLAKKYLAIPATSAPSERVFSTAGNIVTPKRSRLNPE 47
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: T1EL11_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EL11_HELRO) HSP 1 Score: 58.5 bits (140), Expect = 2.670e-10 Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 22 NYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPE 150
+P + K+AR+ LAIPAT APSE++FS +G I+N+RRN+L PE
Sbjct: 4 RFPTIAKVARKYLAIPATSAPSEQIFSMSGQIINERRNRLKPE 46
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 60.1 bits (144), Expect = 4.030e-10 Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPE 150
W K + +PH+ +AR++L IPAT PSER+FS AG IV K+R L PE
Sbjct: 72 WRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNLKPE 120
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A0A1WMC4_ZEUCU (Putative AC9 transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WMC4_ZEUCU) HSP 1 Score: 60.1 bits (144), Expect = 6.390e-10 Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPET 153
W+ + YP + KLA +VLAIPA+ A SER+FS AG I+ ++RN++ P+T
Sbjct: 95 WLNNNKRYPRLSKLAEKVLAIPASSAASERVFSLAGNIITEKRNRIAPKT 144
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A7S3PTX0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX0_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.910e-9 Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPE 150
W + R YP++ LA+R+L++PAT APSER+FS A +I K+R L P+
Sbjct: 98 WKQNHREYPNIWMLAKRILSVPATSAPSERVFSVASLIATKKRGSLKPD 146
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A1X7SKZ7_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SKZ7_AMPQE) HSP 1 Score: 59.3 bits (142), Expect = 2.330e-9 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPE 150
W K E +P + K+AR+++ +P T P+ER+FS +GMIVNK R L PE
Sbjct: 117 WRKNEERFPRLSKIARKLMCVPTTSVPAERVFSTSGMIVNKLRASLKPE 165
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A6I8U4U8_AEDAE (BED-type domain-containing protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=A0A6I8U4U8_AEDAE) HSP 1 Score: 60.5 bits (145), Expect = 2.380e-9 Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQL 141
W K ER +P + K ARR+L IPAT APSER+FSC+G I+ +R+QL
Sbjct: 671 WKKNERVFPCLAKCARRILGIPATSAPSERVFSCSGNIMTSQRHQL 716
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Match: A0A4U5UIN6_COLLU (Zinc finger BED domain-containing protein 1 n=1 Tax=Collichthys lucidus TaxID=240159 RepID=A0A4U5UIN6_COLLU) HSP 1 Score: 60.1 bits (144), Expect = 2.740e-9 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 4 WVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDP 147
W YPH+ +LARR L+IP T +ER+FS AGMIVNK+R+ LDP
Sbjct: 242 WKTSGTKYPHLARLARRYLSIPGTSVRAERVFSTAGMIVNKKRSALDP 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13552.2512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13552.2512.1 >prot_H-elongata_contig13552.2512.1 ID=prot_H-elongata_contig13552.2512.1|Name=mRNA_H-elongata_contig13552.2512.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp MWVKRERNYPHVDKLARRVLAIPATMAPSERMFSCAGMIVNKRRNQLDPEback to top mRNA from alignment at H-elongata_contig13552:6320..6475- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13552.2512.1 ID=mRNA_H-elongata_contig13552.2512.1|Name=mRNA_H-elongata_contig13552.2512.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=156bp|location=Sequence derived from alignment at H-elongata_contig13552:6320..6475- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13552:6320..6475- >mRNA_H-elongata_contig13552.2512.1 ID=mRNA_H-elongata_contig13552.2512.1|Name=mRNA_H-elongata_contig13552.2512.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=312bp|location=Sequence derived from alignment at H-elongata_contig13552:6320..6475- (Himanthalia elongata Himel1 dioecious)back to top |